Id Trinity | FTRINITY_DN52392_c0_g1_i4 |
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Name Transcript | Ll_transcript_231029 |
Sequence | CGACCCGTCACCTTGTTGTTTGAATTTGTTGGATTTGTTTCAGAGATTCGAAAATACTGCACAAAACAAACCCTAATAAATTGTAGCTCCTTATTCGTAA TAGCAAATTCGAAACACAGTTCAAAATTTATATTCGAAGGTTTTCGTCGCGAAATCCGAATGGGGAATAGAAAAGAACGTCGTCGTGCTGCTCACAACAA CGCTGGTCGAAGAGTCAAACTCGATCTCTTTGCTCAACCCTCTGGAGTTTTGGGTGGCTCCATTGTACATGGCGATGCTGGAGAAGATGCCAGTTCACAA AATCGTGATGGGTTACTCAATTCACCCTCTTCTTCAGGTGGGTCCTGTCAGTTTTCTTCAAAAGGACTATATTTAGGGGACATGAGTGATCAACATTAAA TTGGTGGAAATATGGAACTATATAGACAAGACATATTTTGTTGTTTGTGCCAAGAATTTTTCTCAGACTGTAGGGCTGCTGGGGTCTTGGGAACATTCAT TTCAGATGAGGTCGGCTCTGCCACATTGAAATAATAATGACTCCCTACCGTTTTCCTCCCTTTTGGCAGCATCAAGGGATTTCCGAGGTTCAAGCAATAG ATGTTGTTTGCGGTCAACAACCACAGAATCCACTGCTGTTACTTGGGCAATATAGCGATGATGAAGCAGATGAGGGATCAAGCGAAAGGCCTACCGATGC AATGGTGCAAAGTCCAATGCTGAATGAAGAGGGTAAGGGTTTACTTGGTGAAGTTTGCAACGACTTGGACATCAGTGTCTCGGCAGATCTTGTTGCTCAG AATGACGGACAACATAATACAATTGAAAATTCTGATTCATTTGATATTGAAAGAAGTGGAAAAAATGAAAGTAATGTTGCTGCTGGTACTTCGCAAAATG AAATAGTTTCCACAGACCAGATGCCAGTTCTTGAAACTTTGGATGAATGTGCTGGCACTGATATTAGTTTGGGATGGAAGATGGTGTTGCATGAGGAAAG CCAATGCTATTATTACTGGAATGTTCAGACTGGGGAAACATCGTGGGAAGTGCCCCTGGTTTTGGCTCAGGCACCTCAGTTAACTAATCATCTGATACCT CCTCCTTCTGACAATGATAAAAACGAGAGTGCTGCAATTGAAATGGATAATTCCAATGTTCCCTCAGCTGTGATGCAGGACACTTTATCTGCTCCCACAA TTGATGGTTCTCTGGAAACTACAGTTACTTGTCATAAAGAATTGTGTGGGCATGAATCCCAAATGACTGGTGGTAACGGTGAATGTAGAAGTGAAAACCA AGCTTCTGATGCTAATGGAACTGAATTGATAAGGAATAATGGTGTCAGATGTTTATGTTATGGTGGAGATCATTCATTTGATTCCAAGTTCAGTGTTGAA GAACAGCAGTCAGCCATTGATTTTCCTTCTCGTCTTGTAAAACAGAGTGAGGGTTTGTTAAAGAGGCTGAAATCACTGGAAAGGTCAAACTCAAAGGGCA AACTACAAGGCGAGGACTCCTTGTCAAAGTATATATTAGAGATTGAGATCAGGCTTTCTGATTTTCGGTCTCTTGCATCCTATGGGCCATCCTTGCTTCC ATTCTGGGTGCATTCTGATAGGCAGATAAAACTACTTGAAAGTTCAATCAATGATGATTTGTTTTGGGATGCTAAATTAGCACATGACGAAGTTGAGGAT AAACATGGCCATGTCACTGCAGGATTGGTTGAGCAGCAGAATGGCATGGAACATGAGCCTGAAGTAGACCATAGTGATAAAAAAGTAAGCCTTGTTACTT CTGAAGTATCTAATGGATCTCAGGTTGATGCTTCTGATGTACTTCTAAGAGATATCCATGATAAGGTTCCAACCAGTGGTCAGCATGTTCCTCTGTCCAC AACTACTTCTAGTCATACCGAAACAGGTGTAGAAGTTAATACACAAGTTGAAACAACTCTAAATCCTGAGGAATCAACTCATAAACTTGGGTGCGATGTT GAAGATGATGTTGATATGGATGTAGACATGGAAGTTGAAGACATGAGTTCCTCAGGCAATTCAACTGTCATGGATGTTTCAGTTGTAACAGAGTATGTGC AAACAGACCAACCACTTCAGGTTAATTCACTTGTTGATTACCATTCTTTGTTGCCAGAGGATGAATTTGTTGTTCCTCCTCCTCCTCCTCCAGATGATGA ATGGATACCTCCACCTCCGCCTGATAGTGAGCAGGAGCCTCCACCACCACCACCTGATAATGAACAAGCACCTCCTCCACCTCCTGGTGATCCACTGATA CCATCTTATCATATTCTCCCATCCTACACAGAAACAGGACAATCCCTTTCGTATGCCCAATATAGTATACCTTATCCTGGTGCTAGCTCCGAGTACTATG GGCAGACGGCTACTGGAGTCCCAAACAGTAATATATATGGACCAATTGCTATTCCACCATTGCAGCTCTACTATAGTGCAGTTCCTAACTCATACAATGA AAATACTCAAGTTATAATTAATCCAACTGATCATGTCTCTTATTATGAACTTCAAGATGGTATGTTAGTATTATTACCAGAATTAGTCATTATGGAAGTG ATTTTCTATTGTTATTGCTGGTTGTATTCACATTTTTGTAATTACCCTTATTTATCAATCTGGGTTTTTAAATTTTGACAGGAGCTGGTTCAGGTTCCAC ACTTGTCAATATTAGTGATTCTAGTGATGTTGGTGGGGCTGGCAGGGCATCTATGGATGTCCCTTCCACCTCATCTACCATCCATCCACCTGCAACTGTT TCAGTTGATGATTGTGGATTATTGCCACCAGCCAGTGCTGAAACTGCTGCATGCAGTGCTGCCCCAGTAGTTGCTAAAGCGCAAACTAAAGTTGTACGTA GTAGAAAGCGACCAGTTGTAGTTGGATCCTCATTAAAGTCAAATAAGAAGGTTTCGAGTTTGGTGGACAAGTGGAAGGCAGCTAAAGAGGAGTTGCTTGA AGAAGAGGAAGAACCCGAGAGTTTATATGAAGCCTTAGAAAGAAAGCGCCAAAGGGAAATAGAGGAGTGGCGTGCAAATCAAATTGCAAGTGGAGAGGCC AAAGATAATGCGAATTTTCAGCCTCTAGGTGGTGATTGGCGGGAGCGGGTTAAACGCAAGAGGGCACAAGCAGCAAGGGAATCTGCTGCGGTGCCTCAAG ATGCAGCTGAGGATAAGCAGCAGCAGCCTGATTTGATTGAACTCTCTAAGGGTCTCCCATCTGGTTGGCAGGCTTATTGGGATGAGACCTCAAAGCAGGT TTATTATGGTAATACAATCACATCAGAGACAACATGGACTAAGCCTACAAGATGAACAATGATCTATCTTGGCACAGCTACATTGGCTAACATGGAGTTT CATTTTCAAAGAATTGTTTCTTTTCGTTTGATTATAGTATGTTCTGGTTCTATAAGTAGTAGTTTCAAAGGGCTTAGTAGATAAAAATCCATGATGATGA TCATGTTTGTATTGTTCCTGCAATTTTGTAACGAAAATATGGAGCAGTTTTTCTATATAAGCCACAACGGAAAAAAAATCTAGTTTATACCGAAATCTTT ATTTATTTTAAAAAGTGCATTTTAGACCAAGTCATAGTTTACGATCAAGCCGTCTAACCCGCTGAAGATCTGAAATCTGTGGCTGTATATGTTTTGTACG AGACGTTTCAATTTGGTACTAATGAAATTATTATGAGTAAGGGGTAATCCTTTCGAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_25277; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_231029
Blastp | Formin-binding protein 4 from Mus with 42.42% of identity |
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Blastx | Formin-binding protein 4 from Mus with 42.42% of identity |
Eggnog | Formin binding protein 4(ENOG4111F8J) |
Kegg | Link to kegg annotations (55935) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434053.1) |
Pfam | WW domain (PF00397.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |