| Id Trinity | FTRINITY_DN52440_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_87042 |
| Sequence | GGAGGATGATGGAGAACTAAATTGAAACTGACAAAGCAAGTGACCTTTTTCTTCCGAATTTAAAATTTCATAACCTAACATTTGTATTCTCATAAATAAA AAAGAGGAATACACAACACACAAGTTAAGAACCAAAATCAGAGAAAACAAACTCTCAGTTTCAAATTCTTGTTCTCTCATTCAAACCAATTTTGATCAAT GGAAGGAGAAGAAGGATCTCAGCAGCCACATCTTGTTCTAGCTAGCAAGCTTTTCCTTCTCACCCTCAATGATGTTCCTGACATTGAAAAACTTCGATTC AAAGACGAAGTTTTCACCTTTGTCAAACAAGACGATATGCTCCCTTTGTACGAAACCCTAATTGGTAATTCGGTTTTGGATGCGGATCCTGCACTTTTGG ACTCGTTGCGTGCTAAATTGGATGATGAACTCAAGAAGCTTGATGAAAAGATTGCTGATGCTGAGGAAAATTTAGGGGAGAGTGAAGTTCGAGAGGCTCA CTTGGCGAAATCCTTATTTTTTATTCGGATTGGTGACAAGGAGAAAGCCTTGGAACATCTCAAGGTGACAGAAAGCAAGACAGTTGCAGTTGGCCAGAAG ATGGACCTGGTGTTTTATACATTACTTCTTGGTTTCTTTGACATGGATTTTGATCTCATTTCCAAAAGCATTGACAAAGCTAAAAGCTTGTTTGAAGAAG GTGGTGATTGGGAGAGGAAGAATCGCCTGAAAGTGTATGAGGGGTTGTACTGCATGTCAACTCGAAATTTCAAGAAGGCTGCTGATCTGTTCTTGGATTC TATTTCTACCTTTACAACCTATGAGCTTTTCCCCTATGACACCTTTATATTTTACACTGTTTTGACAAGCATTATATCTTTGGATAGAGTTTCTTTGAAG CAAAAGGTTGTGGATGCTCCTGAGATCTTGACAGTGATTGGCAAAGTCCCACATCTTTCTGAGTTTTTAAACTCTTTATATGATTGTCAATACAAGTCTT TCTTCACAGCATTTGGTCAGCAGAGATATTCCATATTTTGCTACTGTTGTAGTTATTTCTTGAAGTTGTTTGATTCTTCAATATCACTTAACACTAGAGT ACTATTTTTATATTGTTACACTTTAGATTTTGTTTAACTCATCTAATATACTTCAATGCTGGCAAATTGCTTATTTTTATGCATTTGAATCTACAATAAT TGTTTTGTTCATTAACGTTATTTCAGATGGCTTGACGGAACAAATTAAGTTGGATCGCTATTTACATCCACATTTCCGGTATTACATGAGGGAAATCCGA ACTGTTGTTTATTCCCAGTTTTTGGAATCATATAAGAGTGTTACAATTGAGGCTATGGCAAAAGCCTTTGGAGTAACAGTGGGTTTCATTGATGTGTAAG TAAATACATTCTACTCTCAATTCTGATTTAATATTAATCAAATGCAGGGTTCCCTCAGTTCATTTATTTTCTTCCAGGGAGCTATCACGTTTTATCGCAG CTGGGAAACTTCATTGCAAGATCGACAAAGTTGCCGGTGTTCTGGAAACTAACCGCCCCGATGCTAAGAATGCTCTTTACCAAGCTACTATTAAGCAAGG AGACTTCCTACTAAACCGGATCCAGAAATTATCACGAGTGATTGACCTTTGAAGTCATCTCTTATGATCCTAAATGTTACCTTTTCCCATTGGGAAAACA CAGGGGATAAGGAGAATTTGAAGGGTTTCATGTTGAATGCATTGTATTTGGTGGATATGGCATTTCTATAGTCTATTTGATTTCCAAATTAAGGAACTCT CAAGCTTGGTGAATCCAAGATGTGTCAATTCAATTTCTAACTAGTTTAAAACAGATTAGATAACTAGTATTTTTTGTTTGACAATATACTTGTGTTTAAA TCAGTGTTATTAAACTCGGACCGGTCATCGACTCGGTCACACTATTGGGTCAATGGGTCACTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_25579; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_87042
| Blastp | 26S proteasome non-ATPase regulatory subunit 6 homolog from Arabidopsis with 78.52% of identity |
|---|---|
| Blastx | 26S proteasome non-ATPase regulatory subunit 6 homolog from Arabidopsis with 78.52% of identity |
| Eggnog | Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 6(COG5187) |
| Kegg | Link to kegg annotations (AT4G24820) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434025.1) |
| Pfam | 26S proteasome subunit RPN7 (PF10602.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |