| Id Trinity | FTRINITY_DN52622_c1_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_208020 |
| Sequence | ATTTTTTCTCTCACACACAACAATGGCTGACCAACTCAGCCATGACCAGATCACAGAGTTCAGGGAAGCTTTCAGCCTCTTTGACAAAGATGGCAATGGT TGCATTACTACCAAGGAACTTGGGACTGTAATTCGAACACTCCGGCGGAACCTTACTGAGGCCGAGCTTAAGGACATGATAAATGAGGTTGATGCTAATG GCAATGTTACTATCGATTTCCGAGAATTCCTCAACTTGATGGCTGGTAAGATGAGAAACACTGATTCAGAGGAGGATCTTAAGGAAGCATTCCATGTGTT TGACAAGGATCAGAATGGATTTATTTCTGCCGCAGAGCTCCACCATGTCATAACAAATCTCGGTGAGAAGCTGACAGACGAAGAAGTCGATGAGATGATC CGCGAGGCTGATGTTGATGGTGATGGGCAGATCAACTATGACGAGTTTGTCAAAGTCATGATGGCCAAGTAAGGACCAATCGAACCATAAACCGAAATTC GAAAAGCATATAAAGAGAAAAGGGGCATAGCAGATAAGTTTTGATGAGAATTCTGTTACAATTAGGATAGCTTTTGTCTCATCATGCATTGTTACTTCTC TGTTAATATCTGCTGTATGATTGGTTCTATGATCATTTTGAATTTAATGCCACATTCAAATGAGTTTGAAATGTAGAATAAGCTATTTTCTACGGTCGAA ATTTTGCTTTGATTGGTTGCGGATCGATCTAAAGTTAAACGTCACATCGTCTTAATTGCCTTTCTCCTTTTATCCGACTTTAAACTTGTGAATGTGGGCA TGTGCCTCCCTACCTCCTAGGAAATGGTAGTTCTGTAAATGTAAGGTCTAAGGACATAGTGAAATGTCGAAGTTTGATTCTGTTATACGTTGCGCCGCGT CCGTTTAATGTGGGGTCGACGCCCTGACTGCGGTTATGTTTATTCACTGCAATTGTCGATAATTGTGGAAGAATGCACTCGCGTTGCAGTTATAGGGAGT TACGGACTACCAAGCCGACAATATTGTGGTTGCTGCCGTAATTTCGAACCTTGCTGCCGTAATTTCTCTGTTTGTAGCTTGTTAAGTTCATCCAGCTTGT GGATTAAATAAATCCCTTGTCTCCATTCTTGTCAATGTTAGATGCTGTTCTTTCTTTGTATGCATGGATTCAATAAGTTTTGATTAAAACACAGTAACTT ATGTTTTTCATGAAATGCTTTTTTAAACACTGTTCTAGCTTATGTAGTTATGTTGTGTGAAGTTATGGCTGCAAAGAAGCCTAGCCATTAAAAGTTGTTT TTTCTTTATGTTAACTTAATAGGTGCACTCTAAGAACTTGTTTGCACCACATTGCAGTTCCTATTTTGAACCCATATATAGCTTTTGATTTCACTTTTTT TTGCAAGTTAATGATCTAGTAAAAGTTGCAACACAATGTTTTTAATATGCTATTATGTTCTTGAATGCCTTAATTATTGTTTATTGATTGAACCCTGGCT GATTTTGATTATAGCAAGTAGAATATTTTATTTCTGTATTCAAATTCTCTATCGCAATCAACAAAACGTTGGTCTAGTGGTGTAAAATCCTACTGAATCC TAAGGAGCGACGCTTGTTGAGAGGGGCAACCACAAACCCAGAAAAATATTAGTTACTTATCCAAAAAACGTGAGGAGATATCCTGGTAATACCCAAAAAT TCTCTATCACAAATTGCTTCAGAGCATCAAGTACTCTAGAGGATCGGATTCGCTCATGCCCGCCATCTTTTGGCGCTTTTGTTCTGTGCTTTGAATCGAC GAATGAGACGATAGATGCTTCGATGTTATGTTATAGAATGGTAACCTTTTGTTGATCACTAACATAATAACCTGTTTTTTTTCTACAAACTGTTGTTAGA GAGGATCTCTCCCACAATATTGTGTTACTCCATATGTCATGAGTCGTGATTGGTTAGAGAGGTGTTCTTGTTTTATTTTAGAAATAGAAATTTTGGTTTT GGTCAACAAAACTCTCAGAAAATGCTCAAGGGAATGTTATAAAAGTAACCACTCAGTTGTTCTCTCCAATGTTGGATTCTTAATATGCCCCACCACCATC TTCTGGCACCTTACAATTGTGCCTTCTTTGAATCATTGGATGTAACAATTGATGCTTTAAGATATTACAAAATGGCATCATTTATTGGGATGGGGATCAG GTGTCCCAAAGCATGTCCCCGACCATGTACCAAGCCAATCAGAAAGAAGGAAAAATAAATAAAAATATGAATGTTTAATTTTTTGACTAATATGGCATGT TGTTATTGGTTTGGTACAGGTTTTAGGACAGGATTTGGGACAGCATATCTTTGTCCGATTTATTGATGCTTCACATTAGTTGAAGGCAGAATAAACATGG TCTATGTCTCCTTGAGGCACTGTTCTTTTGGCATCTAGAAAGCATGGAAACAGAAAATAGGGAAACAAATTCATAAAATAAACAATTAAAAGATATATAA ACAAGAAACCAGGATCAGAGATGAAAATTATGTGTTTGCTTGATGCATATGTCATTGTATTTTACTTTTTCTTTGGTTTTCCACAATATTTTCGTTTCTA TTATCGAAGAGGATTCTAACTCAGAAGCAAGATTGTATCTAAAAAGTATTAAAATATTGATACATAGGCAATGGTTGTTCCTTGCAACAAGTTTGGCATA TGGATCAGACTTCAGTAACTTGTTTACCTTTTTATTTAAAAGTGTATTTTGTTGTCTACAGAATGAGCAAAAGGAAGATTGAGAAGGCTGGAAGACACAA CTATGGCACTAGAGAGGCTTCTTCAAGGTATAAGAGAGGTCGTACTCGTACCAGAGATCGCATACGTGATGAATGTTCCATCCTTTAAATATAATTCAAA TCGATCAGTCAGACTTCTCTAAAGTACAACTATATCCGAAACTCGTGTTAGGAATGCATGACTTATGAGTTTATGTTGTTAGGCTTCACTTATGTACTTT AGGTAAGTCTCCCGTAAACTTACTTCATATCATAGTCATCAATTCTAAGGAAATCTAATAGTTTAAATCTACCCACTAATTCAAATCATTGGATTTCCTT AAAATCGATAGTTGTAATATGAAGTAAGTTTTTAAACTTACACTTTGAATAAATGGATCCTCTCCCATGATTTATGAATTTGAACCATTAGGCTTCTCTT GTAATAATAGAGTTGTCACAGTTTGCATTTGGTAATAACCATCAACTAAAATGATTAGAAACAAATAAAATAGTTCAATTATATATCTTTCTTGGTTTTG GGTGTTAATTTCAAGAGGTATGGTACTCAACAATCACAAAGTTGTCCAGTACACATATATCCCCTCCCTAATATCAAACATTTAGTCGACTCATTCAAGT CATTTATAGATGCTTACTCTGAGTACAACTAAATTCCGATGTAATCCGGATGAAGAAAACACCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_26939; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_208020
| Blastp | Calmodulin-5/6/7/8 from Solanum with 85.91% of identity |
|---|---|
| Blastx | Calmodulin-5/6/7/8 from Solanum with 85.91% of identity |
| Eggnog | Calcium-binding protein(COG5126) |
| Kegg | Link to kegg annotations (102577873) |
| CantataDB | Link to cantataDB annotations (CNT0001037) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428596.1) |
| Pfam | EF hand (PF00036.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |