Ll_transcript_208341

Id TrinityFTRINITY_DN52658_c2_g1_i1
Name TranscriptLl_transcript_208341
SequenceGTTTGGACAAAAGTTGGCCTCTAGTTATTGGTGGTTGCAGTTTCTTTGTGAAAGTTTCATAAAGCTGATAAGATAAAGCCAATTGTATAGAAATACCACT TATTTGCATGCATATACAAAAAAGTTTCTTATCTATTGTGCATGTATTTATCTTTTCTATCATTTGCCACAGTTATGTTGAACTTTTCAAGGCTCTAATG GTTTGAGAAATTGGTTATGGTTGTTTTAGGAAATGGGTGGAGGTTGGTTTTGGAAATTTAGGATTTTTCTATCACCTAAAGCTCCATGATAGTTAGATTA GGACTCATAGTTGCTGCTTCAATCGCAGCTTTTTCAGTTAAGCAGTTGAATGTGAGAAGCTCAAAACCAGACCATGGTGAAACATTGCTTATTAAACAGC ATGAAGATGAGGTCACAGAAGAAGAGCAGGTCACTAGTTTTACTGATGTTCTCAGAGAGCTGGATAAGGAGGAGGAGGAAGAGGAGAAAGAGGAGGTTAA ATTAATTAGCAGCATAATTAATCGAGCTAATGATTATGACGAAGATGAAATTCTACCTGAATTTGAAGATCTTCTTTCCGGGGAGATTGAGTTTCCATTA CCTACTGATAAGGCCAAGAAAGACAAAGTTAATGAAATTGAGATGGCAAACAATGCCATTGAACTACAGCAATTGCGACAGCTAGTGAAGGAATTCGAAG AGAGGGAAGTTAAACTTGAAGGAGAATTGCTTGAGTACTATGGTTTGAAGGAACAGGAATCAGACGTTGTCGAGTTACAAAGGCAACTGAAAATCAAGAC CGTAGAAGTAGATACGCTTAACGTTACCATCAATTCCTTGCAGGCAGAGAGGAAGAAGCTCCAAGAAGAGCTCAAAAATGGAGCCAATAAAGAACTTGAG GTGGCCAGAAACAAGATCAGGGAACTACAAAAGCAGATACAGGTTGAAGCTAGCCATACAAAAGGGCAGCTATTGTTGCTTAAACAACAAGTTTCTGGTC TGCAGACGAAAGAAGAAGCGGGTGTAAAAAAAGATGCGGAGATTGAAAAGAAATTGAAGGCTGTGAATGACTTAGAGGTTGAACTAGTGGAGCTTAAGAG AAAAAACAAAGAGCTTCAATATGAGAAGCGCGAGTTAACAGTTAAACTCACTTCTGCTGAATCTAGAGTCACTGAGCTCTCCAATATGACAGAGAGTGAA ATGGTCGCCAAGGCAAAAAAAGAGCTCAGTGATCTGAAGCATGCAAATGAAGACCTGCAAAGACAAGTGGAAGGACTTCAGATGAATAGATTCAGTGAAG TTGAAGAGCTTGTATACCTCCGTTGGGTCAACGCATGCTTGAGGTATGAACTAAGGAATTACCAGGCCCCGCCAGGAAAATTATCAGCACGTGATCTCAA CAAGAACCTTAGCCCGAAATCACAAGAGAGGGCTAAGCAGCTGATGTTAGAATATGCCGGATCAGAACGCGGTCAAGGGGACACAGATCTTGAAAGCAAC TTTTCCCATCCTTCTTCACCAGGAAGTGAAGATTTTGACAATGCTTCTATTGATAGCTCCACTAGCAAATACAGTAATGTTAGCAAGAAAACTAGCTTAA TCCAAAAGTTCAAGAAATGGGGTAAGAGCAAAGATGATTCTAGTGCTCTTTCATCACCATCCAGATCTCTTTCGACAGGTTCTCCAAGAAGAATGAGTAT GAGTGTTAAACCAAGGGGTCCACTAGAATCCTTGATGCTAAGGAATGCTAGTGATAGCGTAGCCATCACTACCTTTGGGCAGATAGATCAGGAGCCAAGT GATTCTCCTAAATCTCCTACTACTACTAGTGACTCCTTAAATTCTGTTGCATCTTCATTCCAATTGATGTCTAAGTCAGTTGATGTGTCCGTGGATGAAA AGTATCCTGCGTACAAAGACCGTCATAAGTTAGCGTTAGCTAGGGAGAAACAAATTAAAGAAAAGGCTGAGAAAGCAAGAGTACAGAGGTTTGGTGACAA CACAAATTTGAGTATGGCCAAGGCTGAAAGAGATAGATCTATACCTTTGCCACCAAAACTTAATCAAATAAAGGAGAAGACTTCATTTGTTTCTGGTAGT CCAAATGATCAATCTGATGATGGTAAGAATGTCGATAATCAAAGCATTAGCAAGATGAAGCTTGCGCAAATTGAGAAAAGACCTACTAGGGTCCCTAGGC CACCTCCTAAATCATCTAGTGGTGGTTCTGTTAGTACAAATTCAAATCCTTCCGGTGGAGTAACGTCCGGTACACCACCACCACCTCCACCACCTCCAGG TGCTCCACGACCACCGCCACCACCAGGTGGACCACCTCCCCCACCTCCTCCTCCAGGAAGCCTATCAAGAAGTGCAATGGATGGTGACAAAGTTCATAGA GCTCCACAGCTAGTTGAGTTCTATCAAACATTGATGAAAAGGGAGGCAAAGAAGGATACTTCATCATTATTAGCTTCTTCAACAAGTAATGCATCTGATG CCAAGAGTAACATGATTGGGGAAATTGAGAATAAATCAACGTTCCTCTTAGCCGTGAAAGCTGATGTAGAAACACAAGGTGACTTTGTCATGTCCTTGGC AACTGAAGTTCGAGCAGCCACCTTCTCGGATGTTGAAGACTTGGTTGCCTTTGTGAACTGGCTAGATGAGGAACTTTCCTTCCTGGTCGACGAACGAGCT GTCCTCAAGCACTTCGATTGGCCTGAAGGGAAAGCAGATGCACTAAGGGAAGCAGCTTTTGAATATCAGGATCTGATGAAATTGGAGAAGCAAGTCACCA CCTTCACTGATGATCCCAAACTCTCATGTGAAAATGCTCTGAAGAAAATGTATTCATTGCTTGAAAAAGTGGAAAATAGTGTATATGCACTCTTGCGGAC AAGAGATATGGCTATTTCGCGGTACAAGGAATTCGGAATCCCAGGAAACTGGCTGTCAGATTCAGGAGTTGTGGGCAAGATCAAGCTTTCTTCTGTGCAA CTGGCAAAGAAGTACATGAAACGTGTTGCATCTGAGCTTGATATATTATCTGGACCTGAGAAGGAACCAACTAGAGAGTTTTTGGTTCTGCAAGGAGTGC GTTTTGCTTTCCGTGTTCATCAGTTTGCTGGAGGCTTTGACACAGAGAGCATGAAGGCTTTTGAAGATTTAAGGAGCCGCATCCATAATACTCAAGCAGG AGAAGATAATATACCAGAAACATAGTGTGTCCATCACAGTATTTTTATCAAGTTAAGATCCATTTAGTTCTACCAAAATTCAGGTGTGTATCAATTTCGT CCGTGAAATGGTTCCCAACGATATCAAATTTGGTCAAATTAGTCATTTACTATTTTTATGATTAAGTTTTGGGACACCATAATCCTATCGGAAACTACTT TGATGCATGTTTGCGATCTGTAGTAGTTTGTATATTTATATTTTCGAGATGAAATTGGTACACACGAGAAATTTACAAGGACCAAATTGGGTATTTGTTT TATTTTTTTCCTTGTAATTGTTTCTCTTATATATATACATATGTTGCATTAACATCTTGTATACTTCATTTTGCTTGTTCAATTTGTATAGTTTATACAT ACTGGATGCTATACAATGATAAAAGAAGCATATTATAATGATAACTCCAACCTCATGGTAAATTGAGATTCAACTGATCAAAATATATA BLAST
Tissueflowers
Gene nameLI_gene_27210; 
Additional informationdetails; 

Expression of Ll_transcript_208341

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_208341

BlastpProtein CHUP1, chloroplastic from Arabidopsis with 68.45% of identity
BlastxProtein CHUP1, chloroplastic from Arabidopsis with 63.42% of identity
EggnogChloroplast unusual positioning(ENOG4111F63)
KeggLink to kegg annotations (AT3G25690)
CantataDBLink to cantataDB annotations (CNT0000365)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019429886.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;