Ll_transcript_208235

• Id Trinity: FTRINITY_DN52690_c2_g2_i17
• Name Transcript: Ll_transcript_208235
• Sequence: GACTTGACAAAAAAATAATATTGAAAATGACTAAAAAGTGAGTAATAATAAGGATGATTAAAAAAAAAGAAAATATAAATTAAATTTAAAAGGGTGAATA AAAAAGTAAACAAGTTCACTAAACCCTTCATCCAAAGTCTCAAAATGGGGAAGAAGAACAAGAGTAGAGACGCAGACGCCGAACCCAAACTCACCGTCAC GAATGGCCATAGCGACGATTCTCCAAAAGCAAAGAAGAAACATAAGAAGAATAAGAATAAGGACCAAAACGAATTACCCACAGTTAGCATAGCCGTCGCT GCTTCCATCATTGACAACGTTCCTACCCTTGAACTCGCTACTCGGTTAGCTGGTCAAATCGCTCGTGCTGCTACTATTTTTCGAATCAACGAGGTTGTTG TATTTGATAATAAAAGTATTGTGGGACAAGATTCAACGGTGGATAATTTAGATGATGAAAGTAGTGCAGCCTTTTTTATAAGAGTTTTGCAGTATCTTGA GACTCCTCAGTATTTGAGAAAGGCTCTCTTCCCAATGCATAATGACCTCCGATTTGTGGGCCTGTTGCCGCCCCTTGATGCGCCACACCATTTGCGCAAA CATGAGTGGGGTCCTTACCGGGAAGGTGTCACATTAAAAGAAAGAGATTCAAACAATGGTGCAACACTGGTTGATGTTGGTTTAGCAAAGCACATTTTAG TCGATCAAATACTTGAACCTGGAAGAAGAGTTACTGTAGCCATGGGTACCAACCGCAATTTGGATTCAGGTAACAAGTTAATCTTTGCAATATTTTTATG TTGAGTTCTGCTTAAGACATTCCACAATTTTTGAAAATCTAAATTATGCTCCATGATGTTAGCAGGTAACAGGGGTATACTTAGACTGTGCAAACTTTAC TTTTTCTGTTTGTCACATGTGTCTTAGTTACTGCAAGGTTTTGCCCCTCTTCCAGTCTTAGTTACGTGCATTTCAACCAAAAAGTTAATGTGAATGTTAA AGAATTGTTTCACAGCAGTACTTACATAAGCTATTGTTACTAACCTAAAAGGAATTGCTGTATGCCTGTACCTTGATTAATTATTAAGCTATCAATGAAG AAATTGTATTTATGGCAAGAGAAAATTAAGAGTGAGGTGCAGGTTGTTGAAAATGAGTGCTAAATACATGCAAGTATACAACATCTTGGCAACATGAGTT TGCGCTAATTTACATCTCTGTACTTCGTCTAGATTTACCACGCCAGGTTGTCTCATCATCCAAGCCAAGGGAAGAAGGAATGTATTGGGGATATCAAGTT CGTTATGCGCATAATATTAGCTCAGTATTTAAGGATTGTGCATACAAGGGTGGCTATGATTATATAATTGGTACCTCTGAGCATGGCCAGATTATTAAGT CATCTGATCTTGAAATACCTCCTTTCCGGCATTTATTGATCGCGTTTGGTGGACTGGCTGGGTTGGAAGAGAGTATTGAAGAAGATGAAAACTTAAAGGG AAAGGATGCAGGGGATGCATTTAGTATATACTTAAATACATGTCCACATCAGGGTAGCCGAACAATTCGAACTGAGGAGGCTATTTTAATATCTCTTCAG TACTTCCAAGAACCAATAAGCCGAACATTGCAGAGTTGATTGTTGTGGTGTTTGCCAAAAACTCATTTAGGATTTTTCACATGGGTAGCTGTTCCCTGTC AACACTTTTGTATTAGTTCAAGTGTTTATGACTGAATCTAAGATGCAAGCAATATTTCAAAGCCAGTATTGAATTTTTTCCCTCTACCTCATCCCAAACT GGCCCTCGGGTCTTAAATTGCATTCTCTAACCGCATTTAGTGTAGTTTTGGGAGTCGCCATAATTACAATTCGCCAGCCACATTTCTCGCAACTGCAGTA CATGCAATGTAATCGCCAACGCGATTTAAAACCATTGCGGGTTCATCAAGATTCTTTGGGAAGTTCTGATATTTTCTGTTTACCTAGACTGTATAAGTTC CAAACAGTATTTGTTGTTCATTTATATATGTATTGTATTCTTATTAACTCTATTAGATAACTGATATTGCATCTGAACTTAATTTAAAAAGTAATTGAAG GGTGTAATAAGAGAACCATGTAAAGCCATCTGAACTGATGTATTTCCTAGTGTAGAGTGATTTTTGAGCTGCACCACTGAAAGCCTATAGCTATACTTAT ATTCCTAGGAGAAGCATGTAGCCATGTGGAGAATGTAATAAGAAATGCAGAATGGTCACTATCTCCTCATATTTGGCATGCC
• Tissue: flowers
• Gene name: LI_gene_27429;
• Additional information: details;

Expression of Ll_transcript_208235

FPKM

• FPAB: 0.1
• FPNAB: 0.1
• LF1: 0.1
• LF2: 0
• LF3: 0.3
• LF4: 0
• UF1: 0
• UF2: 0.4
• UF3: 0.1
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_208235

• Blastp: Putative methyltransferase C9orf114 homolog from Mus with 46.88% of identity
• Blastx: Putative methyltransferase C9orf114 homolog from Mus with 45.78% of identity
• Eggnog: chromosome 9 open reading frame 114(COG2106)
• Kegg: Link to kegg annotations (227695)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441569.1)
• Pfam: Putative RNA methyltransferase (PF02598.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;