Ll_transcript_228220

Id TrinityFTRINITY_DN52736_c3_g1_i5
Name TranscriptLl_transcript_228220
SequenceGTGAACCCTACAATATCTCCACCATCCTTCCGCCGTCGAAACCCATCTTCCTCTGCTTCCGCCGTGAAATCGAAATGTTGATGAGCCAAATTGGTTTCGG TGTGAAGTTTGGGAATTGGAGATGCTACGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAAAGTGAAGTTGCTGTTGTTGAAGGTGGTAATGGCAGA ATCTCAGAACGCCAACATATCCGTCTCGGTTTACCTAGCAAAGGTCGCATGGCCACTGACACCACCGACCTCCTCAAAAATTGTCAGTTATCTGTTAAAC AAGTCAATCCTAGACAGTATGTTGCTCAAATTCCTGAGCTCTCCAATTTTGAAGTATGGTTTCAGAGACCAAAAGATATTGTAAAAAAATTGGGATCTGG TGATCTTGACCTTGGTATTGTTGGTCTTGATACTTTCACTGAACATGGGCAGGGGAATGAAGATCTTATCATTGTTCATGAAGCTTTGGCCTATGGTGAT TGTCGTTTATCACTTGCGATTCCTCAATATGGAATATTTGAAAATATAAATTCACTGGAGGAGCTAGCTAAGATGCCTCAATGGACAGAATCAAAACCTT TGCGAGTTGCTACTGGATTCACCTATTTGGGTCCTAAATTTATGAAAGACAACGGTCTTAAGCACGTGACATTTTCAACTGCTGACGGAGCTCTGGAGGC AGCTCCTGCGATGGGGATAGCCGATGCTATCTTGGACCTTGTGAGTAGTGGTACCACACTAAGAGAAAACAACTTGAAGGAAATTGAAGGCGGAACTGTG TTGGAAAGCCAGGCTGTTCTTGTTGCAAGCAGGAAATCATTGGTCCAACGTAAAGGAGTACTAGACACAACACATGAGATTCTTGAAAGATTGGAGGCAC ATCTGAGGGCCATAGGGCAGTTCACGGTTACTGCAAACATGAGGGGAAGGAGTGATAAGGAAGTGGCTGAGAGAGTAGTGAGTCATCCATCATTATGTGG GTTGCAGGGACCCACTGTCAGTCCTGTTTTCGGCCCAGATGGGGAAGTAAAACACTACGCCATAGTCATATGTGTGCCCAAGAAGGCGTTATACAAGTCT ATGAAACAACTCAGAGCGGTGAGTTTTTAAAATAATTGAAGCTGTTTAAATGTTTTTCTTGTTAAGCCTATATTTCTAAATGATTTTGATGGATGAGGGA AAGAAAAATTCTGGGTAGATTACAGTGTTTAACATCAGTACAATCACAGGATTTAACATCAATATACATTGAGTGTATTATTCACCATTTTGGGCATTGC TTCTATTCAAGAGACAATGAATGCTAAATGGTGCGCTAACAGTTTAAAAAAGTTACACCGTTGGTGCAAAAATTATTTTGTCTAGATTAAATATGAAAGA TATAGTTTATCTTTTGCCTGCATTGTAAAATGATGCCACTATTTTTGTTTTGTTTTTTAGGCTCATTCTTATAGGAGAATATAAAAATACCACCTTTAAA TTTATGTTCTCATATTGCTATTATTTAATTTTATTTGACACACACACATATATTGTTTTGTCAATGATTATGATTTATGGTAGAATATTATAATATTGTT CATCTTTGTAGTCGACCCCTTCGGGTGAGATTAAGGTTTGATTCTATATTAGTGTGTCCCTGTGTCCTATATTTTGGGTATTGTGGATGTTCATAAATTG TGTCCTATATTTTGGGTATTGTGGATGTTCATAAATTGTGTCCTGTCAAATATTCTCTTTGAATATTGCCTGCTATTTGTTTGTTCTTCATCTATGGTTC CCATACTTGGTTTCACTCTTTTACTACATTCATATGATGCAGATTGGAGGCAGTGGAGTTCTTGTATCACCCTTGACCTATATTTTTGATGAGGAAACTC CAAGATGGCGTAGACTCCTTTCTACTCTTGGGATGTAAAATATTCCATAATATTTATTATTGTATTTTGGTATTGGCCTATAAATAGGACCAATCTTTTG TACTTTTGTATTAACTTCACGTCTATCGGAATAATATTAGTCGGTGTAAGGAGTTGGTCTAGGGATGCAAGACTTTGTTGGATTCCCAAGTATCTAGCAA TCAATACTTGTTGGATGAGACAATAACATACCAAGTTTAATAAGAATGGTGATTAGATAATATGGGATACATGCTTTGGTGCATGATACTCTATGTGGTT CTTCAATTTTTACATGTTATAAGACTTTCTTTTACGAGGGTATGGCTACTATAGTCATGATTCACAGTGATTCATGTGCCCATTTTTATAGAACATAAAA ATGTTAGTTGACCTTTTACTTGAAATACTTCTCAACCGTGATTAGTGTAACTAAAAAATGAAAGACTTTGAAAACATGAAATATATTAGCTATATGATTC TC BLAST
Tissueflowers
Gene nameLI_gene_27684; 
Additional informationdetails; 

Expression of Ll_transcript_228220

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_228220

BlastpATP phosphoribosyltransferase 2, chloroplastic from Arabidopsis with 75.22% of identity
BlastxATP phosphoribosyltransferase 2, chloroplastic from Arabidopsis with 77.88% of identity
EggnogCatalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity (By similarity)(COG0040)
KeggLink to kegg annotations (AT1G09795)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019443309.1)
PfamATP phosphoribosyltransferase (PF01634.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;