Ll_transcript_228138

• Id Trinity: FTRINITY_DN52757_c0_g1_i8
• Name Transcript: Ll_transcript_228138
• Sequence: ATCGAAACATGGCTATGGCGGAAAAGAAAGAAATAGCAAAACCCTAATTTGTTGAGAAGAGAAGAATGAGGAAATGGAAGATAATCTCCGACGCCGATAA CAACAATTACCACTGGCACAACACTCACCACCACCACGATGATGATGAACAACAATCACCATTCAATTCCATTTCTACTGATTCTACTCCTCTTCTTCCT TCAATGTCTGATCTTCTTCTTCAAGCATGTTCTTCTTCAATTCAACACCAACAACAACAACAAGAACATCAACCTATTGTCATGTTTCGAACCGCTCTCG GAAAACCGGTTCAACCGGCTCAGTCTTCACTCGCCAAGGCTTTACTTCTACTTGGCGAAGATGCGAACGCTAATGCTAATTCAGCCGCTCAAGGTGAAGA ACACCACATAGATAATATTTGCAGTTTCTCCAATTCTCTTTTTAAGACAGGCTCTGGAAAAAGTGTTACTATATCTCCTAATGGTCTGGTTAGAGCAAAG ACTTTACTGGGATTGGAAGAACATGCTGATGGTAGTAATACTCAAACCCTTCAGCATGCAAAAAAATGGCATACTGTCGGTGAAACATATGAAAGGCGGA ACTCACCTCATTTTCAGCTACATAAATCTGTTAACAGTAATAGGGCGATGAATGCTGCATCATGTCAAAATCATTCACTTGGTAGTAGTCATACATCAAA GAATGACTTCGAAAAAGAAGTTGGTCAACCAAGTATGTGTACTTCTGGTGGTAAACAACCTCCAATTAAGTTCCACACTGCAGGTGGAAGGTCTATATCT GTTTCTAATGATGCACTGCAACGTGCTAGAAGCCTTCTTGGTGACCCAGACCTTGGAGATTTCTTTGATGGAGGGGATGCCGGTGACTCAATGTTCTCTT TACCAAATCAGAAACAAACCAACACTAGTTCATCTTGTGACAGAAGTGATTATGATACTCCTTTGGTTGATCAAGTAACACTAGAGAGCAATCTTATGAC AAAATGTTTCACATCACCCTTGTCATCTTATAGACAAAAGGACACCAAGTTCCTTCATGAAGGAACTGCAAATAACTTAATCAAAAAATTTGATGCTGTT GGGAGTGAAAATAATCACAGCCTGAAAAGTAGCATCGCCTCTGGACGGAAACCCCTACATGACATAAACCAAGTAACAGACTCAACTGCATATCATTCTT CGTTGAATGGGTTTTCTTCAAAAGTAGATCCACTTAGAATGTTATCAGGAAGGTCATTGGCTGATATTTCCAATACCATTAACACTGTGCATACAAACAA TAGACAACAACCTGCTAGTGGAAAACGAAGACTAGGACCACATGCAATGGTTTCTCCCTTTAAAAAGCCTCGTGGCTGCAATTCTTCCATCCATTCTGAC AACAACGTTGGAGTTTTTTCTAATGGTTTTTCTCAATTTTCTGGGGATGCTTCCGTAAGCAAAATAAAGGTTTCTACCTTGTATCCATTTCAGCACCCAA GGATGCACATGAAACATTTTTTTGCAGTGCCTTCATTAGATCAAAAAGTGCAATTTCCAAACCTGGTCAGACAGATGACATCAGGTAATGCAGAAAAATA TGTGTTCCATGAGGGGTCTGGTGAAGGTGGTATCGGAGCAGAGGCTTTTGTCAATCTTTTGGTACAGCATGGTGCTTCCACACATTTTGCTTCTAAAGAG TGGGTCTTGAATCATTACAAATGGATTGTTTGGAAGCTGGCATGCTATGTGAGATGCTGTTCAGCTAGGTCTGCTGGAAATTTTTTGACTATATCAAATG TACTTGAGGAACTGAAGTACAGATATGAAAGAGAAGTGAACCATGGTCACCGATCGACCCTAAAGAAAATTCTTGAAGGGGATGCATTACCTTCTTCAAT GATGGTTCTATGCATTTCTAGCATTCACTCTAATCATGGACTGGAAAATGGGACTTCTTCTGAGACAGAGACTGGGACTCAGAGCAGTGAGTCAGTAATA GTCGAACTAACTGATGGATGGTATTCTATGAATGCCATGTTAGATGTTCCGTTGTCAGAGCAACTAGCTTCTGGAAAATTGTTTGTAGGACAGAAGCTTC GGATCTGGGGAGCAGGATTATGTGGCTGGCATGGGCCAGTTTCACCCCTTGAGGTGTCATCAGCAGTTAGTTTAATGCTGCACATAAATGGAACATATAG AGCTCATTGGGCAGACCGGTTAGGATTTTGTAAGGTAGCTGGTCCACCTTTGGCCTTCAGATGCATAAAAGGCAATGGTGGTCTAATCCCTCAAACTTTG GCTGGAGTTACTCGCATATATCCTATTCTTTACAAGGAAAGGTTAAGCTGTGGAAGGTCTGTTGTCATATCAGAGAGAATGGAGGATAAAATGACGGAGC TATATAATCAGAGATGCTCTGCTGTTGTAGAAGGCATCATTTCGGATTATCAGAAGGAAAGAAGAGGTTCACGTATTGATGAAAGTGACAGTGAAGGAGC TAAGATTTATAAAATGCTGGAAGCAGCTGAAGAACCTGAGTTCCTAATGGCAGATATGAGTCCAGAGCAGCTTAGTTCTTTTTCTGCATATAAGGCCAAA TTAAATGCAATCAAACATTCTGAAATGGAAAAAACAATTGAGAAAGCTTTGAAAGATGCTGGCTTAAGAAACAGAGAAGTCACACCATTTATGAGGTTGC GGGTTGTTGGATTAACTCACAAAACTCGACAAGACCGGCCGAAAGAGGGCATAGTAACAATTTGGAACCCAACAGAGAAGCAGCGGCAGGAGTTGGTAGA GGGAGAAGCATATGTAATCGCAGGTCTCATACCATCAGGTGTTGATTTAGACATCCTTCACTTGCAGACTAGAGGATCTTCCACCCAGTGGTTGCCTTTA TCTTCTGATGCAAAAGAACAGTTTAAGCCTTTTTTCAGTAATCGAAAATCGTTCTCAATGTCAAGCTTGAGTGACATCCCTCTTTCCAGTGAGTTTGATA TTGCTGCACATGTTGTGCATGTGGGAGAGGTTTATTTGTCAAGTCAGCAAAAAAAACAATGGGTTTTCGTGACTGATGGATCCATTATGCATGGTTTACA ATCAGAAACAATCTCTTTGCTTGCCATTTGCTTTTGCTCTCCATCAATTGATTATGATTCATTACCATTGATTAACTATAATCTTGCTGGATCTACGGTT GGTTTCTGTAATCTTATTAAAAGAGAAAAGGACAAAACAAACCATATCTGGGTTGCTGATGCTACCGAAAACTCGACCTATTGTTTGAGTTACGATTCCC TGCACCATGCTCACCTCAGAAACACCGCCAGCTCCATCAGAAGATGGGCAAACAACTCTAGCTTGACAATAGAGAAACTCAAGGAAAAAGTGTTGTCTAT GGTTGGTGATTGTAAAGGATAACTAAGATGGGCCTAAATTGCTATTTTGCCATTGGTCTTGATTTGCATATGGAAGGGTATTCACTTAACCCATGCTCTT ACCATTAATGTCATATTAAGGTAATGGTTTTAAATCTCTTAATTTAATGAAGAGATATAGTTAGTTATACTTTCTTACATTAACTCAGTATAGTCATAGC AAAATGTGATTGTACCCAATTATGATATTTTTTGCTTTGTAATATAATCACAATGGAATGAATTGATGAGTGATCTATGACAAAATTTGAAGGTTATATC TGAAAAATTAAAGCTTGTAGTGGATTGATTGAGCAAGCAAAATGCTAACCCACACATTCTTGGCCTAACATTATGACAGTTTTGTTGATTTGTCCTAACT TAACAAATAAAATAATACTATCTGTGTAAAGATTTATACATAGTTACTATATCATTTGTATTACTTTTATTTAAGAGTCAATAGTTA
• Tissue: flowers
• Gene name: LI_gene_27870;
• Additional information: details;

Expression of Ll_transcript_228138

FPKM

• FPAB: 3.8
• FPNAB: 3.3
• LF1: 3.5
• LF2: 2.8
• LF3: 3.8
• LF4: 2.3
• UF1: 1.8
• UF2: 2
• UF3: 3.7
• UF4: 2.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_228138

• Blastp: Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B from Arabidopsis with 44.44% of identity
• Blastx: Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B from Arabidopsis with 44.2% of identity
• Eggnog: Breast cancer 2, early onset(ENOG410Y06W)
• Kegg: Link to kegg annotations (AT5G01630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438733.1)
• Pfam: BRCA2 repeat (PF00634.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;