Id Trinity | FTRINITY_DN52770_c2_g2_i2 |
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Name Transcript | Ll_transcript_228947 |
Sequence | CTTTTCTAAAATCATCTTTGTAGAATCACTTCTTCACTATTTCTTCTTAAAATACAAATCTAAACTATGTGCCCTACTAATCCTCCACAAAAAAGATGAC ATGTGTCACAATAAGATACTTTATTTATAAGTTATGTGTGTCACTTTTCCGTGGATAGGAGGATTCTCTAAGAAAAAAATGAAACTTTTGAATTAGATTT TGACAGATCCTATAAAATAAGGCCCAGATCTCTTTTCCATCACCCCCTCTTCATTTCACCATTGACATTGTTATCACTATTTTTGTAAGCTTTCTCTTAC ACTACTTTGCTTCTGGAAGCGTCAAATATGGATACTGTGAAGAATGATGATCCTCAAGATCAGAAGCGTGACGAACTCGCTGAATCGCTCAACGGTCTCT TCAGCAGCATTTCCGCCATGGTCAAATCAGAGCTTCGGGGTACTAATAATCATCTAGAGCTGTTGGAGAAGATGAATGTGAGGGTGGCGGAAGAGTACAA AGGGTTTGGTGATTTGGCTTCAGGGTTAACGGTTTTTATGGAGCAGTTGAAATGCAAGAGTGATAGCTTTAATGAGTATGTTGAGCAGATTGATGCCATA GAGAAGCAAGTCACCGAATTTGAAGCTGTGGTCTCTATGCTCGATAAATATACGGCTTTGTTGGAATCAAGAGTGCAATCTGCATACCAAACCAAAATCC ATCCTCCTCCTAATTGACAATACATATCAGATTTGATCGGTTTTCTTGTATATTAATTTTGACTTATTAATCTTGTATTGTGGACAGCTAGTGTTTTAAA CATGAATTCCGAAAATAGTCACGAAGAAATGTTCTCTGGATGTCATTAATATGATTGACTGTTTTGTGATCTTTTCCTGAGACAACTTCGGTATAAGTCG TAGTGTCTGCTTTGTTTATTCTAAAACATAATGTTATATCACACTATCTATTAAATTGCAGTCCTCTCTTCGGGAGAGCTACTCAATCCTATATCTGATT GCATCATAGCTTTTTTTCATCCCATCTTCGAAGTATTCTCTTTTGCTTCGTGAAACCTTCAAGCATGGATACAAGGAGCTGTGTTCTTGGTTCTGTTATC TCAATTCTGGTTATTTGATTACACCAGCAAGTGTTTCTGGTTCTGCATGTCCGGGTTTGTGCATGTGGATTTCTGGTTCTAAAGAAAACGGTTAGATGAA GTGATTTCTACGGCCATCTTTCCCCAATTTTGTGAATTGAAGGCAACTTCATTTCCAATGAACAGGTTCCCCAATTTTTGTTGAATGATGGTAGTTTTGC AACAAATTCAGGCAAAGACAATCCGGTCTATGAGGTATATATACATTGTTTTACCTTCACGATGAAAAACTAATTCTATGATTTGAATCCATGACCTCCG ACTCGAAGGCTCAAGGCAACAATGTAAGTAATATTTCATGACAACTAGGCTACTACAACTAATGAAAAACAGTTACCAATTCGCTTAAAGCTGAGCAAAG GTGCAAACACAAGCAGTGTTGTTAAAAGGAGAACAAAAGTACGGCCAGTGCACCAATGAACACCAAACATCCTTCAAGGATACCAGAATGGTGATCTCCA CCTGAAGAAGTTCCTGATAGAACATCACCTGCATTGCCAACAATACAAAACTCAATTATACAACACTAAGCTACCATTTGTATAACACAACAACGGTTTT GTTCTATGTTTGGTGTATCTTATAAATGAAACAAAATGGAACATAATATTAGAAGGTAAAACATTTTGGTTTTACTAAGAGGGACTTAGCCAAAAAGAAC AGATTCAGAAAGTATTGATCTGTAAGTCTTTCTTTATTATTCGGTTTTTTTGTCTAACTCTTTCTTTATGAATTAGATTAGCTTCC BLAST |
Tissue | flowers |
Gene name | LI_gene_27978; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_228947
Blastp | Biogenesis of lysosome-related organelles complex 1 subunit 2 from Arabidopsis with 62.83% of identity |
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Blastx | Biogenesis of lysosome-related organelles complex 1 subunit 2 from Arabidopsis with 62.83% of identity |
Eggnog | phytoene(COG1233) |
Kegg | Link to kegg annotations (AT5G49550) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453552.1) |
Pfam | Biogenesis of lysosome-related organelles complex-1 subunit 2 (PF10046.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |