| Id Trinity | FTRINITY_DN52770_c2_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_228961 |
| Sequence | GATGAAAGAGATACCCTTGGTCAAACCAAAAAGAATATTGCTGATTTAATTGTCAGTGCAATTTCACTCTCCATCTCTAAGGTCTTTTTTTGCATACAGT TTTGTATTGTTTAATTGATGATGTTTCCTTAGGATTTGAATATTCGCTAAACTTCATGATTTCGTAAACAGAACTTTGCCGATTGCGATTTTTTGAATCC GTGGCTAGATTGTTGTCTTGGGTCAAACCATTATTAGCTCTCTTCCCCTGTGAATTGATTAATAGTACTCTATTACTCAGGAAGCGTCAAATATGGATAC TGTGAAGAATGATGATCCTCAAGATCAGAAGCGTGACGAACTCGCTGAATCGCTCAACGGTCTCTTCAGCAGCATTTCCGCCATGGTCAAATCAGAGCTT CGGGGTACTAATAATCATCTAGAGCTGTTGGAGAAGATGAATGTGAGGGTGGCGGAAGAGTACAAAGGGTTTGGTGATTTGGCTTCAGGGTTAACGGTTT TTATGGAGCAGTTGAAATGCAAGAGTGATAGCTTTAATGAGTATGTTGAGCAGATTGATGCCATAGAGAAGCAAGTCACCGAATTTGAAGCTGTGGTCTC TATGCTCGATAAATATACGGCTTTGTTGGAATCAAGAGTGCAATCTGCATACCAAACCAAAATCCATCCTCCTCCTAATTGACAATACATATCAGATTTG ATCGGTTTTCTTGTATATTAATTTTGACTTATTAATCTTGTATTGTGGACAGCTAGTGTTTTAAACATGAATTCCGAAAATAGTCACGAAGAAATGTTCT CTGGATGTCATTAATATGATTGACTGTTTTGTGATCTTTTCCTGAGACAACTTCGGTATAAGTCGTAGTGTCTGCTTTGTTTATTCTAAAACATAATGTT ATATCACACTATCTATTAAATTGCAGTCCTCTCTTCGGGAGAGCTACTCAATCCTATATCTGATTGCATCATAGCTTTTTTTCATCCCATCTTCGAAGTA TTCTCTTTTGCTTCGTGAAACCTTCAAGCATGGATACAAGGAGCTGTGTTCTTGGTTCTGTTATCTCAATTCTGGTTATTTGATTACACCAGCAAGTGTT TCTGGTTCTGCATGTCCGGGTTTGTGCATGTGGATTTCTGGTTCTAAAGAAAACGGTTAGATGAAGTGATTTCTACGGCCATCTTTCCCCAATTTTGTGA ATTGAAGGTGAGTATTTAAGTTATATAGTTCTGTTAATTGATTTTTCACCAAAGGAAGTTGTTTGAATTTACTTGTGTGTAGTCCGTATATAATCGTTGA CGTGTCTCATGACTGAAGTGGTTTATTTATCACTCTTTCATGCAGGCAACTTCATTTCCAATGAACAGGTTCCCCAATTTTTGTTGAATGATGGTAGTTT TGCAACAAATTCAGGCAAAGACAATCCGGTCTATGAGGTATATATACATTGTTTTACCTTCACGATGAAAAACTAATTCTATGATTTGAATCCATGACCT CCGACTCGAAGGCTCAAGGCAACAATGTAAGTAATATTTCATGACAACTAGGCTACTACAACTAATGAAAAACAGTTACCAATTCGCTTAAAGCTGAGCA AAGGTGCAAACACAAGCAGTGTTGTTAAAAGGAGAACAAAAGTACGGCCAGTGCACCAATGAACACCAAACATCCTTCAAGGATACCAGAATGGTGATCT CCACCTGAAGAAGTTCCTGATAGAACATCACCTGCATTGCCAACAATACAAAACTCAATTATACAACACTAAGCTACCATTTGTATAACACAACAACGGT TTTGTTCTATGTTTGGTGTATCTTATAAATGAAACAAAATGGAACATAATATTAGAAGGTAAAACATTTTGGTTTTACTAAGAGGGACTTAGCCAAAAAG AACAGATTCAGAAAGTATTGATCTGTAAGTCTTTCTTTATTATTCGGTTTTTTTGTCTAACTCTTTCTTTATGAATTAGATTAGCTTCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_27978; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_228961
| Blastp | Biogenesis of lysosome-related organelles complex 1 subunit 2 from Arabidopsis with 62.83% of identity |
|---|---|
| Blastx | Biogenesis of lysosome-related organelles complex 1 subunit 2 from Arabidopsis with 62.83% of identity |
| Eggnog | phytoene(COG1233) |
| Kegg | Link to kegg annotations (AT5G49550) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453552.1) |
| Pfam | Biogenesis of lysosome-related organelles complex-1 subunit 2 (PF10046.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |