Ll_transcript_234436

• Id Trinity: FTRINITY_DN52855_c2_g2_i8
• Name Transcript: Ll_transcript_234436
• Sequence: TAAATACCCCCTTCCTTCTCTTTCACCCCTCATAATCAATAATCAAATTCCTTTTCATTCCCAATCTCAAACCCTATCGCAATTTCAATCTCAATTCATG GCTCGTACAAAGCAAACAGCTCGCAAATCCACCGGTGGCAAGGCTCCAAGGAAGCAACTCGCTACCAAGGCTGCAAGGAAATCTGCTCCTACAACCGGAG GAGTCAAGAAGCCCCATCGTTATCGCCCTGGAACTGTTGCCCTACGTGAGATCCGAAAATACCAGAAGAGTACGGAACTATTGATAAGGAAATTACCTTT CCAGCGTTTGGTTCGTGAAATAGCACAAGATTTCAAAACTGATTTGAGATTTCAGAGTCATGCTGTGCTTGCTCTTCAAGAAGCTGCTGAAGCTTATTTA GTTGGATTGTTCGAGGACACCAATTTATGTGCCATTCATGCTAAGAGAGTCACTATTATGCCCAAAGATATTCAACTCGCTAGGCGTATTCGTGGTGAAC GTGCTTAGTTCCGTTTAATTGCTTTTCGAATTTTTCAATTATAGTTTCACAGATGTGATCTTTTTGAATTGTATACTAATGAAATGGGATTTTTGTCATA GTGTAATGTTTCGTGAAATCATAGATAGGATTTTGGTATATTTTGTTTTATGGGGTTCTTATCATGCTTCAGAGTATTGAAATCTATGGGATGCTGAATT CTGCGTAATTGATTAGTCATTTTGTCATTTTTCGTGCAAATCAATCTTTTTTTCACGTTCAGAGTGAGATTGAGTTGATTGTAGGAAGTTCTTATGCAAT GATATGCTGTTTGGGCTTGGGCCGGAACCTCAATGAGTGTGTTGGAATAGATATAAAAATGATAGTTTTGATTTGATTGCAAACTCTAGATTTTGTTTGT CATTCTAATAATGCAACCAATTAATG
• Tissue: flowers
• Gene name: LI_gene_28623;
• Additional information: details;

Expression of Ll_transcript_234436

FPKM

• FPAB: 12.5
• FPNAB: 29.9
• LF1: 8.4
• LF2: 9.3
• LF3: 13.3
• LF4: 22.2
• UF1: 14.2
• UF2: 25.6
• UF3: 3.2
• UF4: 22.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_234436

• Blastp: Histone H3.3 from Vitis with 100% of identity
• Blastx: Histone H3.3 from Vitis with 100% of identity
• Eggnog: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling(COG2036)
• Kegg: Link to kegg annotations (100248958)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_007163667.1)
• Pfam: Core histone H2A/H2B/H3/H4 (PF00125.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;