| Id Trinity | FTRINITY_DN52908_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_104988 |
| Sequence | CGTTAAAAAAACAGAACCATTAATCTTTAAAATCATCAAACAATAAGCTTGAAGCGCATAACAAATTTGATCTATAAAAATTTCACCCAAAAAAACGATT TATCTTTTTTGCTCTTTGTTTCTCACTAACTCGTGGTTGGATTTTGAAGTCAAAACCTCGCAACCATTTTTGTTCACCACTGAATTCAACTACGTGAAGA ACACAATTACATGAATCTTTAGTTGTTTTATGTTTTGCATCTCTGAACTATGAACCATAGCCACGGTGAACGGAACATGTCAAGTTCCGGCGACGATGAC CATTTTCCGGCGGGTCTTCGGGTTATGGTGGTGGATGATGATCCCACGTGTCTAATGATTCTTGAGAAGATGCTACGTACTTGTCTCTATCAAGGTGTCT CTCACTTAATCTGTTTCCATCTTTTTCTCTTCAGTTTCACTTCACCTATTTCATCGCTAATTTCGTTCATAAAACAAAACCCAAAAAAATAGACTTTATC AGTTTCCTTATTTCTCTCTCTTCAGTTTCTTATACCCATTATTATTGGGTTTTCATTTCTGAAGTTTAAGTTGGTTTTGACTTGGTTTCTTATACCATGA ACTGTATCAAATATCAAACCTTTGTTGAGTTGTTTTTGTTGTGTAATGATTTTATGAATTCATTGTAGTTACTAAGTGCAATCGAGCAGAGATTGCACTC ACACTTCTAAGGGATAATAGGAATGGTTTTGACATTGTTATTAGCGATGTTCATATGCCAGACATGGATGGATTTAAGCTTTTAGAACACATTGGGTTGG AAATGGACCTTCCTGTTATCAGTAATTAATTGATTCATAAGTTTTGATCCATGCAGTGAAGTATTGATTTGAGAGTGTGATAATTTCTGCAACAAAAATT ATTGTAGTGATGTCTGCGGATGATAGTAAAAATGTTGTTATGAAAGGTGTAACACATGGTGCCTGTGATTACCTCATTAAACCTGTTCACATTGATTCTC TGAAGAATGTTAGGCAACATGTCGTTCGGAAGGAAAATAATGAGTGGAGAGACACTGAGCAATCCGGTAGTGCTGAAGAAGGAGATCAACATCGAAAGCC ATCTGAAGATGCGGATTACTCATCCTCCGCGAATGAAGGCAGTTGGAGAAGTTCGAAGAAGAAGAGGGATGAAGATGGGGATGCAGACGAGAGAGATGAC ACATCCGCGCTAAAAAAGCCTCGGGTGGTTTGGTCTGTTGAGCTCCATCAACAGTTTGTGGCTGCTGTGGAACAATTGGGAATTGATAAGGCTGTTCCGA AAAAAATTCTGGAATTGATGAATGTTGGTGGGCTCACTAGAGAAAACGTAGCCAGCCATCTCCAGAAATACCGTCTGTATCTTCGAAGGGCTAGTGGACT TTCTCAGCAACCAAACAACCCCTTCCTCAACCAACAAGATGCAACTTTCGGGTCAACATCAACAAATGATCTTCAAACTCTAGCAGCTTCTGGACAGCTC ACTGCACAAAGTCTAGCGACACGTCAAGCAGCAGGACTTCATAGATCAACTGCAAAAGCGGGCGTACCTATGCCTCTCATTGATCAAAGAAAACTTTTCA GCTTTGAAAACCAAAGGTTAAGATTTGGAGAAGGGCAACAACATCATTTGAGCAGTAGTAAATCAATAGACTTACTTCATGGAATCCCTACCATGGAGCC AAAGCAGCTCGCCGATTTGCGCCAATCAACCCAATATATTGGCAACTTGAATATGGGAATCGATGCTTCTACTACACAGACCAGCCCCTTATTGATGCAC ATGACACAATCACAACCTAGAGGACAGGTTCTACATGAAAATACTGGTCTTTATCCCAGACTATCATCATCTTTAGGGCAGCCTAATAGGAATGGAATTT TTAATGGCCCTATTAGTACAAATGGTACTGCTACTAGCAACCGAGCACCTGCACAAAAGTCTCCAACGTTGAGTTTTCCTATGAATCAAACCCATGAAAT GTCTGTCACTAGTTTCCCTCTTGGAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_29048; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_104988
| Blastp | Two-component response regulator ARR2 from Arabidopsis with 61.01% of identity |
|---|---|
| Blastx | Two-component response regulator ARR1 from Arabidopsis with 48.1% of identity |
| Eggnog | two component, sigma54 specific, transcriptional regulator, Fis family(COG2204) |
| Kegg | Link to kegg annotations (AT4G16110) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456053.1) |
| Pfam | Myb-like DNA-binding domain (PF00249.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |