Ll_transcript_104659

Id TrinityFTRINITY_DN52940_c3_g1_i15
Name TranscriptLl_transcript_104659
SequenceGTGGATTCTGAGATGTTATCGCGTGTTGTTCTTTTATTCTGATTTTGCGACGCTCTCTTCTCTTCTCTTCTTTCTGGAGACTAACTCTTCGGTTCGCTTC TTTTTCTTTTCTCCCTTCTCACTCTCTCTTTTCATTCTTCACTTCACATATTTCCTCTTTTCTGTTTTCTATTCGCTCTTTTTTCTTTTTTCTTATGAAT AGGGTTTTACTCATACTCTCTTCTTTTCGTTTAATCAATTTCGCAATTACTAACTAACACGTGAATCTTTGTTCATAGGTGAGAAAGTGCAAGCAATGGA TGAGGTCAAGAAGCATAAATCTAGGAAAGACGGGGATTCTAAGCGGAGTCACCGTGATCCAGATCGTAATGCCGATAAGAGAGATTCCGAGACGCGGCGT CATGATAAAGACAAGAATAGTGATTCTGAAGATAGGCATGATAGAGATAGGGAGAAACGTAAGGATAAGGAAAGGACCCGAGTCAAGGATGTAGATAAAG AGCGAACTCGAGACAAGAAAGTCGAAAGAGATAGGGATGACAAGGAAAGGGAGAGGAGCGATAGGGTGAGAGAAAAAGATCGAGACAAGGTTAAGGAGAA GCGACGAGAGAAAGATAGGGAAAGGGAAAAGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGGAGGGAGCGTGCGAGGGAGAAG GAAATAGAAAGAGAAAAGGGGAGGAGAGGACACGAGAGGGAGAAGCGTAGGAACGTTGATAGCAAAAACAGTGATGATGAATCGAGGGAGAGAGATAGGA AGCGGCATAGGAAAGATGATGATGATTACAAGGGGCGAGAGAGGGAAAGGATTGTCAGCAAGTCGAACAGGCAAACTGAGAATAGTGAAGCTAGCCCAAG GAAGAAGAGTAGTGAAGATGAGGACGGTACTAAAGATGATGAGAGTAAACCTACACGCGAAGAGGAGATGGAGATTGAACAAAGGAGACTGGATGATGAA ATGGAAAAGAGGCGGAGGAGAGTTCAAGAGTGGCAAGAGCTTAAGAGGAAGAGAGAAGAAACAGAAAGAGAAAAGCAAGGTGAAGCCAGTGCTGATGAAC CTGAGTCCAGGAAGACTTGGACCCTTGAAGGGGAATCTGATGATGAAGAAGGACCGGCTGCTGGGAAACAGGACACAGCTATGGATGTAGATGAAGATGA AGATGAAAAACCTGCTGACAAGGAACCTATGGATTTGGTGGTAAGTCATGATAATGGAACAGTTGCGTCCGACTTACAGGATGGAAATACTGGTGCTCCT GAAGATGAAGAGATCGATCCATTGGATGCTTTCATGAATTCTATGGTTCTTCCTGAAGTTGAAAAGCTGAACAATGCTGCAGCCTTGTCACTTACTGATA AAGCTGCTGACTTGAAGCCCAAGGATAAGGAGGATGAGCAAAGTCGTGGTGGACAGGCAAGGAAAGGTTCAAATAAATCTATCGGGAGAATAATTCCCGG TGAAGAGTTTGACTCAGATACTGCAGATCTTGAATTTGAGGGGGATCCATCCGATGAAGATGATGATGAGTTCATGAAAAGAGTGAAGAAAACAAAAGCT GAGAAGCTTTCTATAGTTGACCACTCGAAAATTGATTATATGCCATTCAAGAAAAACTTTTTTATTGAAGTGAAAGAGATATCGAAGATGACTCTTGAAG AAGTTGCATTATATAGGAAGCAGTTGGAGTTGAAGATACATGGAAAGGATGTGCCGAAGCCTGTAAAATCATGGCACCAGACTGGACTTACCAGCAAAAT TTTGGACACAATAAAGAAGATGAACTACGAAAAGCCGATGTCTATTCAAGCTCAGGCGCTGCCAATAATCATGAGTGGTCGAGACTGCATAGGCATTGCT AAAACTGGTTCTGGCAAAACACTTGCTTTTGTTCTGCCAATGTTGAGGCATATCAAGGATCAGCCACCAGTTGTTGCAGGAGATGGACCTATTGGGCTTA TTATGGCCCCCACAAGAGAGCTTGTTCAACAGATTCACAGTGACATAAAGAAGTTTTCAAAGGTAATGGGTATCAGGTGTGTGCCTGTCTATGGAGGTTC TGGTGTTGCTCAACAAATTAGTGAGTTGAAACGTGGTGCTGAGATAGTGGTTTGCACTCCAGGTAGGATGATCGACATACTATGCACCAGTAGTGGAAAA ATAACCAACCTGCGTCGAGTCACTTATCTGGTTATGGACGAGGCTGATCGAATGTTTGACATGGGATTTGAACCTCAAATCACACGTATTGTTCAGAATA TCCGGCCTGATCGTCAAACGGTTCTCTTCTCTGCTACTTTCCCCCGTCAGGTCGAAATTCTGGCTCGTAAAGTTTTGAATAAACCTGTTGAAATACAAGT TGGTGGGAGGAGTGTTGTGAACAAAGACATAACACAGACTGTTGAGGTGAGGCCAGAAAATGAGAGGTTCTTTAGACTCTTAGAAATATTGGGGGAATGG TGTGAGAAAGGAAAGATTTTGATATTTGTTCACTCACAAGAGAAATGTGATGTTTTGTTCAAGGATTTGCTCAGGCATGGTTATCCATGCCTTTCTCTTC ATGGGGCCAAGGATCAGACAGACCGTGAATCCACAATTTCTGATTTTAAAAGCAATGTTTGCAATTTGTTGGTTGCAACAAGTATTGCTGCCAGGGGATT AGACGTCAAGGAGCTTGATTTGGTCATTAATTTTGATGTTCCAAACCACTATGAAGATTATGTACATCGTGTTGGGCGCACTGGCCGTGCTGGCCGAAAG GGTTGTGCCATTACATTTATTTCCGAGGAAGATGCAAGATATGCACCAGATCTGGCAAAAGCCTTGGAGCTATCTGAGCAGGTTGTTCCCAATGACCTGA AAGCTCTTGCTGATAGCTTTATGGCGAAAGTGAATCAAGGACTTGAGCAAGCCCATGGAACTGGTTATGGAGGCAGTGGATTTAAATTTAATGAAGAGGA AGATGAGGTGAGGAAGGCAGCAAAGAAAGCACAAGCCAAAGAATATGGGTTTGAAGAAGACAAGTCAGATTCTGAAGATGAAGATGACGGTATCAGGAAG GCAGGTGGTGACATCTCACAACATCCGGCTCTTGCTCAGATTCTTGCTGCCCAGAAAGTGAATTCTCCAGCAATGCCGAATCCCATCTCCGTTGGCCAGC CGATTTCAAATGGCGGGATACCTTCTTTGTCAGCTGTTCTTGGTCTCCAGACCGCAACAGTCTTGCCTGGGAATGATGTGGCAGCTCGAGCAGCATTAGC TGCTATAAACCTGCAGCACCACTTAGCAAAGATACAATCTGAAGCATTGCCAGAGCATTATGTGGCCGAGTTGGAGATAAATGATTTCCCCCAGAATGCT CGCTGGAAAGTGACGCACAAGGATACTTTAGGCCCAATTTCTGACTGGACTGGAGCTGCAATTACCACTAGGGGGCAGCATTTTCAACCTGGCAAGATCC CGGGACCTGGAGAACGCAAACTCTACTTGTTCATTGAGGGTTCCAGTGAGCAGTCTGTTAAGAGAGCTAAAGCAGAGTTGAAGCATGTTTTGGAAGACTT CACAAATTTGCAACTTCCTGGTGGAACTCAACCAGGGAAATACTCCGTCGTATGAAGGGTAAGATTCTGATTTAATTGAACATATTATTGCTTGTTTTAT TGATAGTAGCTAATTATAAATTATAAAAGTATCATGTTACGTACTTATTCAGGGGATAGATGGCTGCCCAGCTTAGTAGTCAGTGTTTTTTGTTACCTTC TCTGTTCCTTATTGCCATTATTGGTACCTAGTGTGAATAAGACTTGGTTTGATGGATTTCCTTTAGGATCAGAACACTAATATAGGTATTCTTTTCTGGG TTTGTGTTTGAAATGAACATGATTTGGTGTATAATCAGATCTTAGCTAGTGAACAAGTGATATTTGTTTAGTGATGCTTTTATTTTGTTATTATGATCTA AAAATATTCTGCAACCTAAGAGTAAATCTACTTTTGGTTGTCAACCTGAAGGCAAAATGGGACTCTGTATAACACACTTGTTTCGCGCCTCAGTCTGGGA AAGGCTGCACTTATTGTCTGCCTTTATTACCCATTCATTGTAATACAGGTATGAGTATTATTGTGGAAAGTCTGGCCCATCTATTCTTGTGTGTCTGTGT TTACCTCTATAAAAGTACTACTCTTAATATCTCTCTGCATACTATAACAATAAATATTAAGATGTTTTTATTTTTACTAAATTTTAAAGGCACAAACATC CTTTTGATTGTTTTCTTTCTTGTTCAGCATTCATTATGGTGCAGGTGGGCCTTTTGAGCCTATGCTTGCCTGTTCAATATACAATTGGTAAGAGCGGACC ACCTTTATTATGTCGGCAGGGGTTCAAATCCTGTCAGGGTCAGTTGTTGGATGGTTATCTGTAAGTACATCAATAAGTGCTCGTTGAACCTCGAGACTTG CTGATCTTGAGCTGAGGCAGCTATCCCATGACCCGAAATTTTTTTGTTACTAAGAAAAATTGTTCTGTCCATTTTACTTGTTTTGTGGCTGTGAAAGGTG CTAATAATATTGCGGCTTTGTTTCATCTAGGTCCTGTTTGATTTTGCAGCAAAAATCTCAAAATCTTGATTGTGCCCTGTAATATCCCATGTGCATGAAT TTTGGCTTGGAGTTCTTTCATGATCATATCACGAGGGGAAACAAGGCGTAATGGGATATCGCATTATTGCCATAGTATGGATTTCAGAACGTGTACCAAA AACAATGCCCATGGCTCTTATACTTATCCTATCTAGAAAGAACTCTCAAATTCTGCATTTGTATTGCAATTCATAGGAATGTTATAAAATATTATATGGT TTGCTTAAAGCATTTCTTGGAATTGTGGATGGAAAATTTTTGGCGACATTTTTCAAACAACTCTTATATTACATTATCTTTTTATTTATCTCTCTTTAAT BLAST
Tissueflowers
Gene nameLI_gene_29321; 
Additional informationdetails; 

Expression of Ll_transcript_104659

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_104659

BlastpDEAD-box ATP-dependent RNA helicase 42 from Arabidopsis with 69.87% of identity
BlastxDEAD-box ATP-dependent RNA helicase 42 from Arabidopsis with 70.41% of identity
EggnogATP-dependent RNA helicase(ENOG410XSQV)
KeggLink to kegg annotations (AT1G20920)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019444598.1)
PfamDEAD/DEAH box helicase (PF00270.28)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;