Ll_transcript_104673

Id TrinityFTRINITY_DN52940_c3_g1_i29
Name TranscriptLl_transcript_104673
SequenceGTGGATTCTGAGATGTTATCGCGTGTTGTTCTTTTATTCTGATTTTGCGACGCTCTCTTCTCTTCTCTTCTTTCTGGAGACTAACTCTTCGGTTCGCTTC TTTTTCTTTTCTCCCTTCTCACTCTCTCTTTTCATTCTTCACTTCACATATTTCCTCTTTTCTGTTTTCTATTCGCTCTTTTTTCTTTTTTCTTATGAAT AGGGTTTTACTCATACTCTCTTCTTTTCGTTTAATCAATTTCGCAATTACTAACTAACACGTGAATCTTTGTTCATAGGTGAGAAAGTGCAAGCAATGGA TGAGGTCAAGAAGCATAAATCTAGGAAAGACGGGGATTCTAAGCGGAGTCACCGTGATCCAGATCGTAATGCCGATAAGAGAGATTCCGAGACGCGGCGT CATGATAAAGACAAGAATAGTGATTCTGAAGATAGGCATGATAGAGATAGGGAGAAACGTAAGGATAAGGAAAGGACCCGAGTCAAGGATGTAGATAAAG AGCGAACTCGAGACAAGAAAGTCGAAAGAGATAGGGATGACAAGGAAAGGGAGAGGAGCGATAGGGTGAGAGAAAAAGATCGAGACAAGGTTAAGGAGAA GCGACGAGAGAAAGATAGGGAAAGGGAAAAGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGGGAAAAGGAAAGAGAAAGGGAAAAGGAAAGGGAAAGGGAA AGGGAAAGGGAAAGGAGGGAGCGTGCGAGGGAGAAGGAAATAGAAAGAGAAAAGGGGAGGAGAGGACACGAGAGGGAGAAGCGTAGGAACGTTGATAGCA AAAACAGTGATGATGAATCGAGGGAGAGAGATAGGAAGCGGCATAGGAAAGATGATGATGATTACAAGGGGCGAGAGAGGGAAAGGATTGTCAGCAAGTC GAACAGGCAAACTGAGAATAGTGAAGCTAGCCCAAGGAAGAAGAGTAGTGAAGATGAGGACGGTACTAAAGATGATGAGAGTAAACCTACACGCGAAGAG GAGATGGAGATTGAACAAAGGAGACTGGATGATGAAATGGAAAAGAGGCGGAGGAGAGTTCAAGAGTGGCAAGAGCTTAAGAGGAAGAGAGAAGAAACAG AAAGAGAAAAGCAAGGTGAAGCCAGTGCTGATGAACCTGAGTCCAGGAAGACTTGGACCCTTGAAGGGGAATCTGATGATGAAGAAGGACCGGCTGCTGG GAAACAGGACACAGCTATGGATGTAGATGAAGATGAAGATGAAAAACCTGCTGACAAGGAACCTATGGATTTGGTGGTAAGTCATGATAATGGAACAGTT GCGTCCGACTTACAGGATGGAAATACTGGTGCTCCTGAAGATGAAGAGATCGATCCATTGGATGCTTTCATGAATTCTATGGTTCTTCCTGAAGTTGAAA AGCTGAACAATGCTGCAGCCTTGTCACTTACTGATAAAGCTGCTGACTTGAAGCCCAAGGATAAGGAGGATGAGCAAAGTCGTGGTGGACAGGCAAGGAA AGGTTCAAATAAATCTATCGGGAGAATAATTCCCGGTGAAGAGTTTGACTCAGATACTGCAGATCTTGAATTTGAGGGGGATCCATCCGATGAAGATGAT GATGAGTTCATGAAAAGAGTGAAGAAAACAAAAGCTGAGAAGCTTTCTATAGTTGACCACTCGAAAATTGATTATATGCCATTCAAGAAAAACTTTTTTA TTGAAGTGAAAGAGATATCGAAGATGACTCTTGAAGAAGTTGCATTATATAGGAAGCAGTTGGAGTTGAAGATACATGGAAAGGATGTGCCGAAGCCTGT AAAATCATGGCACCAGACTGGACTTACCAGCAAAATTTTGGACACAATAAAGAAGATGAACTACGAAAAGCCGATGTCTATTCAAGCTCAGGCGCTGCCA ATAATCATGAGTGGTCGAGACTGCATAGGCATTGCTAAAACTGGTTCTGGCAAAACACTTGCTTTTGTTCTGCCAATGTTGAGGCATATCAAGGATCAGC CACCAGTTGTTGCAGGAGATGGACCTATTGGGCTTATTATGGCCCCCACAAGAGAGCTTGTTCAACAGATTCACAGTGACATAAAGAAGTTTTCAAAGGT AATGGGTATCAGGTGTGTGCCTGTCTATGGAGGTTCTGGTGTTGCTCAACAAATTAGTGAGTTGAAACGTGGTGCTGAGATAGTGGTTTGCACTCCAGGT AGGATGATCGACATACTATGCACCAGTAGTGGAAAAATAACCAACCTGCGTCGAGTCACTTATCTGGTTATGGACGAGGCTGATCGAATGTTTGACATGG GATTTGAACCTCAAATCACACGTATTGTTCAGAATATCCGGCCTGATCGTCAAACGGTTCTCTTCTCTGCTACTTTCCCCCGTCAGGTCGAAATTCTGGC TCGTAAAGTTTTGAATAAACCTGTTGAAATACAAGTTGGTGGGAGGAGTGTTGTGAACAAAGACATAACACAGACTGTTGAGGTGAGGCCAGAAAATGAG AGGTTCTTTAGACTCTTAGAAATATTGGGGGAATGGTGTGAGAAAGGAAAGATTTTGATATTTGTTCACTCACAAGAGAAATGTGATGTTTTGTTCAAGG ATTTGCTCAGGCATGGTTATCCATGCCTTTCTCTTCATGGGGCCAAGGATCAGACAGACCGTGAATCCACAATTTCTGATTTTAAAAGCAATGTTTGCAA TTTGTTGGTTGCAACAAGTATTGCTGCCAGGGGATTAGACGTCAAGGAGCTTGATTTGGTCATTAATTTTGATGTTCCAAACCACTATGAAGATTATGTA CATCGTGTTGGGCGCACTGGCCGTGCTGGCCGAAAGGGTTGTGCCATTACATTTATTTCCGAGGAAGATGCAAGATATGCACCAGATCTGGCAAAAGCCT TGGAGCTATCTGAGCAGGTTGTTCCCAATGACCTGAAAGCTCTTGCTGATAGCTTTATGGCGAAAGTGAATCAAGGACTTGAGCAAGCCCATGGAACTGG TTATGGAGGCAGTGGATTTAAATTTAATGAAGAGGAAGATGAGGTGAGGAAGGCAGCAAAGAAAGCACAAGCCAAAGAATATGGGTTTGAAGAAGACAAG TCAGATTCTGAAGATGAAGATGACGGTATCAGGAAGGCAGGTGGTGACATCTCACAACATCCGGCTCTTGCTCAGATTCTTGCTGCCCAGAAAGTGAATT CTCCAGCAATGCCGAATCCCATCTCCGTTGGCCAGCCGATTTCAAATGGCGGGATACCTTCTTTGTCAGCTGTTCTTGGTCTCCAGACCGCAACAGTCTT GCCTGGGAATGATGTGGCAGCTCGAGCAGCATTAGCTGCTATAAACCTGCAGCACCACTTAGCAAAGATACAATCTGAAGCATTGCCAGAGCATTATGTG GCCGAGTTGGAGATAAATGATTTCCCCCAGAATGCTCGCTGGAAAGTGACGCACAAGGATACTTTAGGCCCAATTTCTGACTGGACTGGAGCTGCAATTA CCACTAGGGGGCAGCATTTTCAACCTGGCAAGATCCCGGGACCTGGAGAACGCAAACTCTACTTGTTCATTGAGGGTTCCAGTGAGCAGTCTGTTAAGAG AGCTAAAGCAGAGTTGAAGCATGTTTTGGAAGACTTCACAAATTTGCAACTTCCTGGTGGAACTCAACCAGGGAAATACTCCGTCGTATGAAGGGTAAGA TTCTGATTTAATTGAACATATTATTGCTTGTTTTATTGATAGTAGCTAATTATAAATTATAAAAGTATCATGTTACGTACTTATTCAGGGGATAGATGGC TGCCCAGCTTAGTAGTCAGTGTTTTTTGTTACCTTCTCTGTTCCTTATTGCCATTATTGGTACCTAGTGTGAATAAGACTTGGTTTGATGGATTTCCTTT AGGATCAGAACACTAATATAGGTATTCTTTTCTGGGTTTGTGTTTGAAATGAACATGATTTGGTGTATAATCAGATCTTAGCTAGTGAACAAGTGATATT TGTTTAGTGATGCTTTTATTTTGTTATTATGATCTAAAAATATTCTGCAACCTAAGAGTAAATCTACTTTTGGTTGTCAACCTGAAGGCAAAATGGGACT CTGTATAACACACTTGTTTCGCGCCTCAGTCTGGGAAAGGCTGCACTTATTGTCTGCCTTTATTACCCATTCATTGTAATACAGGTATGAGTATTATTGT GGAAAGTCTGGCCCATCTATTCTTGTGTGTCTGTGTTTACCTCTATAAAAGTACTACTCTTAATATCTCTCTGCATACTATAACAATAAATATTAAGATG TTTTTATTTTTACTAAATTTTAAAGGCACAAACATCCTTTTGATTGTTTTCTTTCTTGTTCAGCATTCATTATGGTGCAGGTGGGCCTTTTGAGCCTATG CTTGCCTGTTCAATATACAATTGGTAAGAGCGGACCACCTTTATTATGTCGGCAGGGGTTCAAATCCTGTCAGGGTCAGTTGTTGGATGGTTATCTGTAA GTACATCAATAAGTGCTCGTTGAACCTCGAGACTTGCTGATCTTGAGCTGAGGCAGCTATCCCATGACCCGAAATTTTTTTGTTACTAAGAAAAATTGTT CTGTCCATTTTACTTGTTTTGTGGCTGTGAAAGGTGCTAATAATATTGCGGCTTTGTTTCATCTAGGTCCTGTTTGATTTTGCAGCAAAAATCTCAAAAT CTTGATTGTGCCCTGTAATATCCCATGTGCATGAGTTGAGTCTTGGCCTCCTAGAACCTATGAAACTATCATGTGTTTGTTCTTCTGATTGTTATACGTG TCACTTTCAGATTTTGGCTTGGAGTTCTTTCATGATCATATCACGAGGGGAAACAAGGCGTAATGGGATATCGCATTATTGCCATAGTATGGATTTCAGA ACGTGTACCAAAAACAATGCCCATGGCTCTTATACTTATCCTATCTAGAAAGAACTCTCAAATTCTGCATTTGTATTGCAATTCATAGGAATGTTATAAA ATATTATATGGTTTGCTTAAAGCATTTCTTGGAATTGTGGATGGAAAATTTTTGGCGACATTTTTCAAACAACTCTTATATTACATTATCTTTTTATTTA TCTCTCTTTAAT BLAST
Tissueflowers
Gene nameLI_gene_29321; 
Additional informationdetails; 

Expression of Ll_transcript_104673

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_104673

BlastpDEAD-box ATP-dependent RNA helicase 42 from Arabidopsis with 69.87% of identity
BlastxDEAD-box ATP-dependent RNA helicase 42 from Arabidopsis with 70.41% of identity
EggnogATP-dependent RNA helicase(ENOG410XSQV)
KeggLink to kegg annotations (AT1G20920)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019444598.1)
PfamDEAD/DEAH box helicase (PF00270.28)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;