| Id Trinity | FTRINITY_DN53260_c1_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_164583 |
| Sequence | AAAACATGTCACACCAGCTGGCAGCTGCTTAGTACATCTACTCTCTTTTTTGTTTCACAAAAATTAGGAATATAAATTTACCTTTTCATAACATATTTCT TTCTTTGCACCTTACTCTTCACTTTTTTTCCACCTCTTCCCCTTTTCATTTCATGCTTCATATTTATTCCTTCACAACATTATATTAGAATTCAAAACTA AGTAGAGATAGTAAGGTTTTTATGTTAGTACAAGGTGCCACCTTGGACAGTTTGAGAAGAGAAGTGTTAAGCCTTTGCTTTTTCTCCTTCCTTGTACAGT TTGAAAAGATAACTTAGTTTCAAGTTTCCATAGTTGAGAAATGGTTGAGGCTTCTAAATCTCGTAAAAGGACATTGCTTGAATTATATGGTGATGGAACA GGAACTTCCAAAGGGAACAAACTTTGGAATGTGACAAATGACCAAGAATGTAAAGAAAACTCGAGAAGTGAGGGAAGTTACAAGCAACTGGGAGTAAAGG AAGCATTTGTGAATGTATTGAAGGGATTGATGGAAGAGAAAGAGGAAGAGCTTGTTGAAAGGGAGAAGTTATTCGATGCAAGGCGGAAAGAACGAGACTT AGAAAGGAAGAAGTCACTTGACTCATTGATGAAGGCGATGCGTCACCTTGATGAAGAGCTTAATAAGAAAGATATGCAGCATGAAATGCGAGCGAGGGCC CTTGAATCGAAAGAGAAGCAACTTGAAGAACAACAGGATAGGCTTGATTCAAGGCAGAAATCAATGTATGCAGAAGCTGAAGAACGAGAGTTGCAAAGGA AGAAATCACTCAAGTTATTGCAGAAAAGAATGCTTCAGGATGTTCGAGTGCTTGAAATGAAAGAGAAGCAGCTCGAAGAAAGAGTGCAGGCACTTTGTTC AAAGCAGAAGCAATATAAACAACAAGTGGTGGTGCTTGACTTGAAAGACAAGCAACTCGAAGAAGGAGCGAAGTACCTTGAATCAATTAAGAAGAAATGT GAAGGACAAGAGATAGAACTTGAGTCAAAACAAAAGCAACTTGAAGGCCAAGAGAAGGAATTTCTAAGGCAAATGAAGGAGCTTGAATCGAAAAAGAAGC ATTTTGAAGGTCAGGAGAAGGAGTTTAAATCAAAAGAGGAGCTATTAGAAGGGAGGTTAAAGCAGCTTGAATTAAAAGAGAAGCAAATTGACGAACGGGT GGTGGATCTAAACTCAAGAGAGAAGCAATTTAAGTGCCAAGTGATGGAATTCAAGTCAAAAGAGATTGAATTTGATGAACAAGTGAATGAGCTCCAGCGA AAAGAGAGGCAATTTGAAATCCAATGGAAGGAGCTTGACTCAAAAGAGATGCAATTTGAAGACCGGGTGAAGGAACTCGAGACGAAGGGGAAACACTTTG AAGAGGAAGTTAAGGAGCTCAAATTAAAAGGGATGCAGTTTGAAGGGCGAGTGAAGGAACTTGACTCAAAAGAGATGCAATTTGAAGACCGAGTGAAGGA ACTCGAGACGAAGGAGAAACACTGTGAAGAGCAAGTTAAGGAGCTCAATTTAAAAGAGACGCAGTTTGAAGGGAGGGTGAAGGATCTTGGCTCAAAAAAT GAAGCATTAGTACAATTATTTGAAGACGAAAAAGTACCCGATCAAGAATTAAGTCCTGACACAGATGAAAGAAGTCTGCAGTTGCTCTCAAATGTGCAGA CAAATGAAGCTGAGTTGCTTGCCACTAATGATGTTTTAGTTTATTTGAAAACATCATCCGATCCGGCACAACTTGTTTTGGACATAATCCAGAACCCGAT ATCTCCATGGCGCGAGAAGGGATGCAATGGCTTAACAATTGCTAGTGTCCAAATCATTCTGCTTGAGCAGCTAATGAGACTCTCACCTCATATCAAGCCT CGTGTACGAGATGAGGCAATGAAGCTTGCCCGTAATTTGGAAGCTGAGATTAGAGAAAGCACTGAAAATTCTTTGTTGATTCTGAGTTTTCTATTGCTTT TGTCAATTTATGGATTAGCTTCTGATTTTAATGAAGATAAAGTTTTAAAGCTTTTCGAAATTGCTGCTCAACACAAGCAAGCTTTAGAGCTGTTTCGGAC ACTTGGTTTTGCAGATAAAGTCTCTGATTTTGTTCAGGACCTTATTAAGAAGCAGAAGCATATTGAAGCTGTTGGATTCATTTGTGCATACAATTTGGTT GAAACGAATAGGCCAGTTGATCTCTTGCAAGAATATATGTGGAATTCAAGACTGGTTTGCGAAAGAAGTTGCAAGGAAGCAAAGTCTCTTGAACTTAAGG TTCTTTTTTTCTACTCAAATTCTATTTCATTATATTATCGATCTTCATATAGTTCCGTGCGTGTTAAATGCTTAACGTGCACGTCAGGCCAAGGCCATAG ATGAAGAAATTGCTAGCTTGGATGCTGTTCTGCAATGCATTTCAGATAACAATATCGAACCTCGAGATCTGAAGAAGGAGATTCAAGATCGCATCATTAA GCTACACGCCGAGGCAAATAGTAATGTTTATACTGTCACAAGGGCCTGCCTCCAAAAGTGCAGCAACCTTTAGTAAATAAATGTGCTAATGAAAACTAGT TGATGTGTTTCATTTTCTTGTTGGGGTAAATGATTAGGTACATATTTAATGTGGAGATTAATATTGACATGGTACTACTAACTCTTTGTGTGTGACATGA ATGAAAGCTAAAGATAAAATTCATGTCTATTACTACTCCTTTTTTTATTCTTGTCTTCCCCTTCTTGAAGTCAGGGATGGTTCTGTGCTGCATTTTCAAG CATCATGCAGACATGCTGCACTTTTTTTATGGTTCGTATTGATATAGTATGTTGATGTTCTATTTTTATTTTTGCTTGTTACTTTTTTGTATGTAGTTGT CTAGTATGATTAACTAGTGTATACACTGTTTGTGGAACCTAATATATATCTATGTGCATCTCTTCTTCATACATGTCATCTTTGAATAGTTGGAATCAAC TGAGTTTGGCATTGCTTATTTGTAATCTTCAATCACAAACCCTACAACAAGGATGTATCTAATTCCAATCCAGTATATTTCACTCCTAGCCACAGTTCTT C BLAST |
| Tissue | flowers |
| Gene name | LI_gene_32182; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_164583
| Blastp | FRIGIDA-like protein 5 from Arabidopsis with 27.2% of identity |
|---|---|
| Blastx | FRIGIDA-like protein 5 from Arabidopsis with 27.2% of identity |
| Eggnog | Frigida-like protein(ENOG41118RD) |
| Kegg | Link to kegg annotations (AT5G27230) |
| CantataDB | Link to cantataDB annotations (CNT0002388) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457601.1) |
| Pfam | Frigida-like protein (PF07899.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |