| Id Trinity | FTRINITY_DN53294_c3_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_164095 |
| Sequence | TTTCTATGCACTATCCTCACTAGAGAGGATGATGCTCCCTAGTTATATTTAGAGAGAAGTAGAATAGATTTGTTTATATGAAAAGCCAAAATACTTGTTA AGATAGTTTGTCTTGTAACTATTCATTCTCATCATAATCTCTTACCTTTTCTTTGTCTGTTTCACAAATCACAACAGAGACACTGCAGTGGTCCAACTCT TCTTGTTTCCTCTCTCTTTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGACAGACACAAAGGTATCTCTAA TTGAGTGAGTGCTCTTACTTGGATTTGCAGCTGGAATTCTTCTCTCAACTTTATGTTCTTCATTAGGAAGCCTTTCAGTCTAGACCATGACAACCAATAT TTCCTTTGCTCCTGGAATTTATAAAGAAGAAAAGGTTCTCTTTGAGATTGGGAATTCTGAAAAGCAGTTGTGGGCATTGATCCATTCTAAAGGCCTATTG CACTCTGATGCTCAAGACTTGTACCGCAAGGTCCGGTCTAGTTACGAGAGGATAATATTGAATGGTCAAACACATACAGAACTTCAGGATGTTGAATATT CCTTGTGGAAACTCCACTATAAGCATATTGATGAATTTCGCAAAATAATAAAGAAAAGCTCTGGTAATGTGGAGAGCAGAAAGCCAGGAATGCCGCAAGA TGGTGTTGTACAGAGAAAGAACGACAATCATTTAGAGTCATTTAAGTCATTTCTGTCACAAGCTATAGAGTTTTACCAAAATCTGATTCTAAAGCTCAGA GAACATTATGGAGTCCCAGTAGAGGCTTTATTTTATAAAAAGGGTCGGATTTCTAGTTCTATTGAAGCAGATGTCATGCTGGAATGCCAATATTTATGTC ATAGGTGCTTAGTTTGTATAGGGGATCTTGCAAGGTATAAACAACAATTTGAAATCCCTGATGTTCAAAATCATAGTTGGTCAGTTGCTGCTACTCACTA CTTAGAAGCAACAAGGATTTGGCCAGATAGTGGGAACCCACAAAATCAGGCAAGTTTTTCTCTTAAACATTTCATGTTAAGAGAAACTCGTCTCCTTTAT TTCATTCCGATGTTGATAACCTTGTTCATTTGCAGTTAGCTGTATTAGCAACATATATTGGTGATGAGTTTCTTGCTTTGTACCATTGTGTAAGAAGTTT AGCTGTTAAAGAACCTTTTCCTGATGCCTGGAAAAATCTTATTTTGTTGTTTGAAAAGAATAAGTCATCTCAACTGCAATATGTTTCCGGAGAAGTCTGC TTTGATTTCTTAAAACCTTCTGCAAGAATTGGTGAAGAGACCAAAGCACAACTAAAAGATGTTGACTCAAACTGCAATAAACTTGAAGACAAAAGTAATT ATTTTACAGATACAAAGTTATGGCCTCTGATAGTCAGAACAATAAGTTTCTTCTTCATAACATCAAGTTTAGAAGAATTCCATAGTGCACTGGCCTCTAC CATTGGGGAGTTGGATAAAATGATGGAGCTAGAAGATATAGAACTAAAGACCATGTTGGAGTCATATAGTCAAATGGATATGGCCAGAAAAGGTCCTTTC CGAGCTTTTCAAGTAGTTTCTTTATTCATCTTTGCCCTGAAGAATCTAAATGATAAACTTGAAAAAAATGATTCAAACAGCAATAATGATAGGCAGTTGA TGCAGCTGGCATTAGCTGCTGCGTTTAGCTTCATGGGACGTTTTGTTGAAAGATGCTTGAAGGCGAGTTCTTTGAATTATTGCCCCTTATTGCCTTCTGT GCTTGTTTTTGTGGAGTGGTATTCAAGCATGCTTGACACAATTGAAGTATGTGCAGATGATCAGAAGAGCAGAAGAGCTATTTCTTACTTTTTTGATGTA TTTGTGGAACTTTTAAACAAGCTAAATAACAATAGAAAGGAAACCAAAAAGCTTCTTGATAATACCCCTCTATGGGAGGATTATGAGTTGAGGGGTTTTC TACCTGTAGCTTGCTCACATTTCTCATTAGATTTTTGTGGTAATTGGGAGCATATAGATAATTTTGAAAGCGGAATTGAATTGCGTGCTGAGCGTATCAG AGAAGCAGCAAAGAAATTTGCAAGTATATCGAATAACTCGACAAAGTGGGTTTCATGTGATGAATCAGGACAAAAATTTTATGCTCCTAGATCAGATGAA AATAAAGACAAAAAAGAAACAAAAAAGTTGGACTCCAGTGACAATAGTACAAGAGGGGAAGAGCCTAATCAGAAAACTATCAAAGACTCAAGGGAACATG GCAAAGGGATGATAGATGAGAATCCAAGTAGCTCCAGTGGCCATGAAAAATTTGATGTGGTGGAAGAAGAAGAAGTTATTCTCTTCAGGCCACTAACAAG GCATAATTCGGCACCATCACACGTCCCTTCTATCTCGAGTGATGGGAGGATGTCACCAAGAGACAAGGATGACCAAAGCTTACCTTCTGATGATTGTTTG CGCTGTGCTACATCACTTCTTATGGCACAAAACCCATCTCAAAGTGATCCTTGGGAATTCCATGATGACAATTTGAATTTGAGGAGTGAGAAATCGTTCA AACTTCAAGAACATGCAACAAAGGAATCAAATGCATACACTTTTTCTGAAGCTCTAATCTCGGCTGGCCCTCCTTCTCTCAATGCTTGGGTACTTGACAG AGGAAGTTTCAGCTACAACAAAGACAATGGGACTAATGGTGATAGTAAGCACAAGTTGGAGCCTATTGACGAAATAGCTTCTTCATCCTTGGAAGGTCTT TCCATCAATAAAACCGAGTTTTCAGACATTACTTCAGTGGATGCAGCATCTTCAAACTTCCATTCTCCTGCTACACATTCTATTCCAATGCCTTCTGCTC CTTTATTGCCTGACAATGCTACTTGGTTTAGTGATTTACAATCTAGTTTGCCTGCTCCATTATTACCACACACCACACCACCAGTAAGTGCATATTCAGA TTGGAGTTCAACTTATGCACCACATGGATATGATCCTAGATTCCAAGCCTTTTCCAATGGTTTTCCACCACCTGGAATAATGACTTCTTCGGAATGGCTG CGTTGGTATAGAGCGAATTACAAACCAGAGTGGAGCAACAATTATATGCAGCCTACTAGTACTCATTTCAATGCTCCGGCAAATCACGAAAACTTGCTAT ATCATGGCAGCTACAGGTTTAATCAAATTGATAGATGGGGCAATCCTTTGTCTTCTGATCAGTGCAACACATATATCGAACCACCATATCCCCAACTATT ACAGCCAAGCCACTTCAACAACTTCCAAAGAGCTAGTCCTTATTGGTGTGGTGTTGTGACAGACATGAAAAAAGAATCGCAGTCTCTGCTAGAGTACTTG AAGGAGGAGGAATGGCGACTCCAGCGAGATTCTAACCTTAGAGGGCCTACTTTCATGGGAAACTAGGAATCATCAGCTTAACCTTTTGTTCCATGTACCA TTATGTAATTGTACACCTTGTTGAGCACTTTGTTCTATAGGATTCTTGGAGAAAACAATATAAATGAGCACAGTTTAATGTATATACTATATAAATGTTC ATTTCCTGAATGAAAAATTCCAAAGAATGTGGATGAAATATTCTTCATTCAACCCTTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_32436; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_164095
| Blastp | Protein SMG7L from Arabidopsis with 33.33% of identity |
|---|---|
| Blastx | Protein SMG7L from Arabidopsis with 36.26% of identity |
| Eggnog | Telomerase activating protein Est1(ENOG410ZUHD) |
| Kegg | Link to kegg annotations (AT1G28260) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425260.1) |
| Pfam | Est1 DNA/RNA binding domain (PF10373.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |