Id Trinity | FTRINITY_DN53299_c4_g2_i3 |
---|---|
Name Transcript | Ll_transcript_162406 |
Sequence | GGATTGTGGCCGTTGCGATGCAGATTGTGGCCGTTGCAGTGTGAATTATCTTTTTTAGGTTTTAATATGAGAAATGCATCAAGTATGGATCATATCAGTT AGCAGGCTTGGTTTATGATTCCAGTTATTGTCAGTATATCATTGCTGGTGATAGAAACGAACTTTGGTGTTAGTTTGTGCTGAATATTGATGAAGACAAC CTCGGCTAAAGAAATGCTGTATTAGTTCTGCAAGTTGGAAAAGTATATTGCAATGGAAGAAACCCAAAGCCACTATTATCCCTCAAGTATGCCTGAATCT ACCTTATCTAATGACATTGGTGGGAGGTCTAATTTCATTGGGCAAGTGAATCGTGGGCTTGGTGTTCCGGGTCTGAAGAAGAGAGGTCATGGAACTCGCT CTTGGATAAAAATTGATCAGGACGGGAATTCTCAGACTCTGACACTTGACAAGGGTACCATCATGAGAAATTGCGCTTTGCCCTCCAGAGATCTCCGACT ATTGGATCCAATGTTCATTTATCCTTCTACCATATTAGGACGGGAGAAGGCTATTGTAGTCAACCTTGAGCAAATCCGGTGTATAATAACTTCCGATGAG GCCATCCTTATGAATTCTCTGGATGGCAGTGTTGGTCAGTACAGGGCTGAATTATGCAATAGGCTTCAGAAAGAAAAAACTGATGATCTACCTTTTGAAT TTAGGGCACTGGAGTTGGCTCTGGAATTGACATGCACATCTTTAGATGCTCAGGTAAAAGAGCTGGAGATGGAAATATATCCTGTGCTAGATGAACTAGC CTTATCTATAAGTACTATCAATCTCGAACGTGTTCGAAGATTCAAAGGTCACCTCCTTGCTTTGACTCAGCGAGTTCAGAAGGTTCGTGATGAAATTGAA CATCTCATGGATGATGATGGTGACATGGCTGAGATGTGCCTGACTGAGAAAAGGATGAGATCGGATAGTTACCCTTTAAATGATTATCTTCAAACTATTT CATCAGGTAGTGGTAGAGTGATTTCAAGATCAGCTCCTGCGTCACCCGAGCAGTCAACTAGTGGGCTCCAGATGTTGCAAAGGGCTTTCAGCAGCATTGG GAATTCAAGTAAGCATGATAGTTCAGTGCGTTCATCTGATAATGGAGAAAGGATTGAGCCACTGGAAATGTTGCTGGAAGCATACTTTATCGTCATTGAT AATACTCTGAACACATTATCATCGTTGAAAGAGTACATTGATGACACTGAGGATTTTATCAACATAAAATTGGGTAATATTCAAAATCGCCTAATACAGT TTGAGGTGCTTCTTACAGCCGCTACATTGGTAGCTGCAGTGTTTACTGTTGTGGCAGGAGTGTTTGGAATGAACTTTAAAGCCCCAGTTTTTAATTACCC ATTCGGATTCCATTGGGTTCTGGTAATTACTGGAATTGCTTGTGCATCATTGTATATCGCCTTCCTGTACTATTTTAGGTACAAGAATGTGCTTCCATCA TAAACTTCAACAGTTGTAAGTTGTAACTACACATTATACAAAGCCAAATTGGTCTTTTAGGTTCAAGGTGGCAGGGCCTGCTGTGTAAGACATTGAAGCT TTGGCCTTTTCATCAATCAAGATGCTGAATTTCTACTTGGGCAACTATCTATTGTGCAGGCAAAGATATCTCTATAATCCCGCGATATTTTGAAAGAGTC ATAAACCTTCCCATCTCTGCTCTTCTTGTACTCAAACAACAAATTTGAATGATCAAATGCAGTTAGCTTTACAAATCCGTAGTCATAATCTCTAAAGATA CTCCATGTAGTTTTGAGGGGAGTAAATGATGAAAGGTATGCACCAGCACCACCAGCAACAATATGTATGGTCCCATTTAAGGGCCCCTTATAGTGGTGTT TCTCTTCATTAGTGCAGATATTCTGTTCCCATATGCAAAGACAAGTATTTGTTAGTAGATAGAATATACATATACACTTGCAAGTTTACTTAATACTTAA TTCTGGATGTTTCCACAAAATTCAGAAGTATAGATGAAGTCCACAAGGTTGAAGAAACCTGGTATATAGGGCATGTCCTCTCATAATTGTGCACATGGCC ATAGATGCCAATGTCCACCTTGTGTTTCTGCCAGAGCTTTTGAAGGCTTTCTCTCCCCATTGGTTCAGCAAATGATCCCTCTTCTGCATAACATATTTCA TCATGACAGGTACAAGATGAGTAACCGAGTACCCGATGTGCAAGGAAAATCAGCCATGGCTGTTTTTGTCTGTCAACTGATGCTAGACAATGTTCAATGA ACTTGTATTGTTCTGTTCCCTCTCTCCAATCATGTTCAGTGTCAGCAATACAGAACCGGAACATGCCATAGTCACTTGAATACCTGGGAAAAGCGATACA TCATAAAGCTGGACATAATGAACCAACTGTTAGGACTTCAGCATATGAGGAGAGTCCAATCCAAAAGACTAGTCTATTAGGTGGGAGAGTCTCATGACTT AATACCGCATTGAGTTGCTACAC BLAST |
Tissue | flowers |
Gene name | LI_gene_32477; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_162406
Blastp | Magnesium transporter MRS2-5 from Arabidopsis with 63.12% of identity |
---|---|
Blastx | Magnesium transporter MRS2-5 from Arabidopsis with 62.65% of identity |
Eggnog | Magnesium transporter(ENOG410XNNZ) |
Kegg | Link to kegg annotations (AT2G03620) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461931.1) |
Pfam | Apolipoprotein A1/A4/E domain (PF01442.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |