Ll_transcript_246819

Id TrinityFTRINITY_DN53310_c5_g5_i1
Name TranscriptLl_transcript_246819
SequenceGATCAACTTATTCCAATTATTTAGATTTACCACTAATTCAAACCATTGAATTTATCTATAATTGATGATATAAGATGGGGTTAAGTCTTTTAAACTTAGT CTTGGAGTAACGTGATCCCCATGTCAAAGATATATTAAAAACTATCACTGTACTCACTCCATTGGTGGTGTAGAGGAGCGTGACTCAACTTATATATAAA GAAAAAAAGATGTCCTCACTATAAGACTTTAATGAAATGAAATAGAATATTCTTCAACTATAGGGTAAGTGACAATTGGTGGGGAAAAAGGTTAAGCTCT GTTATTTTGCCATCTATTACTATTTATAATTTTTAGTTTCTTAATTTGCAATCTGAAATTCTACTTGGACTACAATGTTATGGTTTTAGAGTCTCTACAA TGAAATAATGCCACTGCAAACTATCACATCTTAGCACAATTTTACTTACTATTGTAATAAGCATAACCACAATGGAAAGTGAACATTTTAGACTTTTAGT ATTAAATAATGGATTAGTGAAGTTATGGTAATAAGTGTTGAATCGGTGGTGGTAATAAATGATGAATGTGAGTATTCACAGGTGGGGCATGTGGTTATGG TACCATGGTGGATGTGAAACCGTTCAGGGCGAGGGTAGGGGCGGTGGGGCCGGTGCTGTTCATGAAAGGGGAAGGGTGCGGTGCGTGTTATAAGGTGAAG TGTTTGGACAAAAACATATGTACGAGACGAGCAGTGACGGTTATAATCACGGACGAGTGCCCAGGTTGTCCCTCAGACCGAACCCACTTTGATCTCAGTG GTGCTGCATTTGGGCGCATGGCTATTACTGGAGAGAATGGTCAACTCAGAAACCGTGGTCAAATTCCAGTCATTTATAGAAGAACCCCGTGTAAATACCC GGGTAAAAAAATTGCTTTCCATGTTAATGAAGGTTCCACTCCTTTTTGGCTATCACTTCTGGTTGAGTTTGAGGATGCTGAAGGAGATATTGGCTCCATG CATATACGAGAAGTATGCATCTTTCTTATGTTGTTTGATATTTAGTTCCATCAAATTTCTTCCTTTACTGCTTATTCCTTAAGTATCACAAATATATTTC TCTATATGAATAAGAATAAATTTAAAAAAAAAAGGAGAAACATGAAAAAGTGCACAAGAGAGAGAACCCTGAATCTCATGTCTGCAGAGGAATCAGATGC CTTTTCAACTAGCAGCCTTTAATATGAAATATATAAAAAAGTGACAATATTCTTAATATATTTTATAGCTAGAATATACACTTTGATTTATTTTAAGAAA ATAAAGTGTAACCAAAAGTAATATATTGCATCTTTGGAACACTGATTCTTGAACTCTGTTGCAGATTTGACCAAAAGGAACTGCCTAAACTTAAAACAAA GCATTATATCCATTTATATTTTTTCTCTAATCAAATAAATAAAATGCAACTTGCAGCATGGCTAGCCTAATATCTTAATCAATGTCTGCAGTGGACAATT CCAAATATTGCGGACGAGCCATCTTTTACACATTAGATTATTATTTACCAAAGATTGCAATTGCAAGACCCTTTTCTTTCCTATATTATCAGTGTCATTC CTCATATGATGGTGCCCATTGGCAACTAATGTTCCTCTGGTGGTGATGCATTTTCCTGTATCTGAACTCAAATCATGTGATATGTAGGACCAATGTTGAA AACGACACTTTCCCCACTTTTGTTTGTAAAAAAAAACTTACAGTTTAGGAACTTTTGGCATCTTATTAAAATTGTGTGCCTATTAGGCAAAATCAATCAA TTATATTACTAGAATATTAAACATTTGAATTGATAATGAAACACTTATCATAACAATTATTTTAAAGAAACACCAAAGCATTGATTGGATATACCAAATA TGGAACATGACAACATAAGTTTTATGCATGTACTATGTTAGGTAGGGGTCAACCTCAGTGTGTTTCATTTGCAAATTTTAACAGAATGAAATGATGACAA TGAGACTGACATTTTTTTTATGAATTTAATATGTATGTACTGACAGCGTAAGTATTTTTTATACTGTCAGCAAATCACCACCATTAATTTGTTATTCATT GTTGACTCTCAAATAAAAGTAATACAAATCAATAGTGAATGATGTGTCGACAGTGTAAAAAAATTTATACTCTCAGTGCACAAATTTTAAACTCTTTTTT TATTGTGTTGTATTTTGGTATTGGCAGGCAGGGTCTAGTGAGTGGGTGCAGATGAATCATTTATGGGGTGCAAATTGGTTCATTATTGGAGGACCTTTAA GAGGGCCATTCTCTGTTAAACTAAGCACTTCCACTGGGAGAACCCTCTCTGCTAGAGATGTTGTTCCAGGCAATTGGGTTCCAAAGGCCACTTACACCTC TCGCCTAAATTTCTACCCTTAAAAAAGCCTTTGCAATTGGTAATTAGTGAGCCATCTTTTACTCTGTTAAAGTTGGTCAAGTCTCATAGCACAAAATTAG TCTTCATGTAGCCATTTCCCTTTTTTGCTATATATAGTTTTTAACCCTTTTTTTATAGGAAAAGTATTAATTGGAGTGCAAAAGAGCATCCAATGATCCT TCTCTTTTCTTATTTTGTTGATTATGTATACCTACTTTTTATGGTGTGTGATTGTTGGTACTTGGTAGTGAGGGTCATGCAGCCTTCTCCAAAAGAGGAG AGAGAGCGTGTAGTATTGTAGTGTATTAATGTGTGTACTGGGTCTTGGCCCTTTGGGCTTTTAATGAATATGTATACTGGATCCTTCAATTGAATGAATG TCTTTAACTATGTCTCTCCTATCTTGTGATAAAC BLAST
Tissueflowers
Gene nameLI_gene_32612; 
Additional informationdetails; 

Expression of Ll_transcript_246819

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_246819

BlastpExpansin-B3 from Arabidopsis with 80.29% of identity
BlastxExpansin-B3 from Arabidopsis with 81.94% of identity
EggnogMay cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity)(ENOG410YA5Q)
KeggLink to kegg annotations (AT4G28250)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019454372.1)
PfamLytic transglycolase (PF03330.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;