Id Trinity | FTRINITY_DN53465_c0_g1_i9 |
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Name Transcript | Ll_transcript_128286 |
Sequence | TAGCCATAGCTTAGCAGAAAGGGTAACCCCATAATTAAACACTAATTAATTTGCTTAATTACAATTATGTATATAAGCCCTGATCTGATATTGGTCTGGT GGTTTAATTCAGTGTTATTACAGGTTCAATCGGTTCCACCATGTTGAAAAATTAATCAAAAATCAATATCTTTTATATTTTTATTAAAAAATAATTTTAA ATAAAAGCCGACCGGATGGTATGGTTCAATTGAAAACTGGTCAGTATAATCGGTTTTAGCCAGTATGATTACATGACCGGTATAATTATTGTACTGTACC AATATTGAGACCGATTCACCAGTTTACTGGTTGAACCGGCCAACACGATCCGATTTTTACAATGCTGATTTAAAACAAGACAACTAGTAGGCATGACTAA ATTTTCTTTTGAGGTATGCTCTAATGCAAAAGCTAACACACCATTGGTGCTTCTTACGTTACTAGCATTGATTAGGAAAAATTACCTTCACTTTTATCAA GGTTTATGAATTAATTATTAAATTAATTGGGTCTAACTCTACTCCAAAAACTAGTTCATAGAAAAATATCTAAATTATTATAAATGACTCTTGGCTTGAT TGTATTGACTCCGTGACAAATTTATGACAAGATTATTATTTTTTTGAAATCTTGGTAAGTTGGTATGATAAAAATGTCCCTGTCTAAAATTGTTAACTAT CCTTATCCCTCCATTAGCTTTTGTTCTGGTTGCAAAAAGGTGATGGGGCTTGTTCCTAATCTGTACATACTTGCAAATGCCATATGCCATACATTTACCA ATAAACAAAGAAAAGTGTTTTGATTCATTCACTTGTTTTTTCCTGGCTCTCTACCAAAAGTGATACATTACCAATAAGCTAGTAGGCTAATTGTTGGGTA GTTGTTCTAGCTTAATTATAGATCTTGAGTTCGAGTCCGTGAAAATGCAATTATGTTTGGTATAAAGTGCTTTGTCGACCATAGTGCTCGAGGAGGATTA CCTCCGGTTACTGGAAATTCACGTGGTTTAAACAAAATCTTGCATACATTTAATATGGCTTTCATTCTTATTCTCAAAACAACCATCACTTTCATGCTCT GCTAAAATAATATGGCCTGTTTTATAGAGGTGGTGGGGTAGTGTTGGGTGCTGTTGAGGGACAACTAAACGTATTGGTGGGGGCAGAGAAATTAGGATTT GATGTTTAGAAGTCTAGAGTAACCAAAAAAAAATTGTCCAAGAAATCATGAGTCTTAACTATCTTCCACTTGATTTTTTACAGAAATGTAAAAAAATAAT TAAAAAACCCTCTATGTTCTTTCATATGGATGTGTAAAAAAAGAAGTGAACATAATACTTTCTAAATTCAATAATTTTATAAAATTCTACAACATTTCTG ATATACATGAATTGAAGATCCCATCACCCACACACATTAGTTTGGACGATGCACACTATCAAAGTGATGTGTGAACAAAAACACTCATTTAAATTAATAG TTAACACTTGCAATTTAGATGGACTGTCATGAGTGTGTGACCCAATTTTGCAGGGATGGATGTGGAATGTGGTGATTACATTACAAAACATGGTAAATCA GCAGTGTTGCAGAAAAAAGTACCTATATATCAAATCGACCGTGCCCTTCAGAATCTTTTCTCTATTAGAATACGGCTAGGCTTGTTCGATGGAAATCCAT CCAAGCTCTTATTTGGCATGATTGGTGCAAGTCAAGTGTGTTCCAAACAACACTTGCAACTAGCCCTTGATGCAGCAAGAAATGGCATTGTCCTTTTGAA GAACAATAAAGCACTTCTCCCACTTCCAAAAACAAACCCCAGTATTTCTGTTGCAGTGATAGGTCCGAATGCCAATGCTTCATCGCTCGCTGTTCTAGGA AACTATTTTGGCAGTCCTTGTAAATTGGTGACACTATTGCAAGGCTTTCAGCACTATGCTAAGAACACCATTTATCATCGCGGATGTGATGATGGAACAC AATGTGCTTCTGTTCAAATAAATCAGGCAGTGGAAGTTGCAAAAAAGGTTGATTATGTGGTTTTAGTTATGGGATTGGATCAAAGTCAGGAGAGGGAATC ACATGATCGCGATCAGCTAGACTTGCCAGGCAAGCAACAAGAACTCATCAACAGCATTGCTGAAGCTTCTAACAGACCAGTTATTTTGGTTCTCTTGTCT GGAGGCCCTGTAGATATCACTTTTGCCAAGCATGACAACAAAATTGGAGGCATCTTGTGGGCAGGTTACCCGGGTGAACTCGGAGGATTGGCCCTTGCGC AGGTTATCTTTGGTGACCATAACCCGGGAGGAAGACTTCCAATTACTTGGTATCCAAAGGATTTCATCAGAGTACCAATGACAGACATGAGGATGAGAGC TGACCCATCATCAGGCTATCCTGGGAGAACATACCGATTTTACACGGGTCCAAAGGTGTATGAATTTGGCTATGGCCTAAGCTACTCAAAATATTCCTAC GAGTTTGTTTCCGTTGCGAAGAACAACATTTACTTCAATCAATCATCCACTCATTTGATGGTTGAAAATTCCGAAACCATCCATTACAAACTGGTTTCGG ACCTAAGCGAAGAAACATGCCAAAGCATGTCCATCTCAGTCACTTTGGGAGTTACAAATCATGGAAGCATGGTGGGGAAACATCCAGTATTGCTGTTTAT GAGGCAGGCAAAACAGAGAAATGGAAATCCAATAAAACAGTTGGTAGGTTTTCAAAGTGTGAAGCTAGATGCAGGAGAAAGATCTCAAGTAGGATTTGAG ATAAGTCCTTGTGAGCATCTTAGCACAGCAAATGAGGCTGGTTTAAAGGTAATAGAAGAAGGGTCCTATTTACTGCTAGCAGGAGAAGAAGAGTACCCAT TAAATATCATTACTTGATGCAACCATGCAATGGATTGAGTCTTCACTTTATGGATCTTGTGACCCATCAATGTATTATGATTTGAGTTCATTCAAAAGCC ATTGTATCCACATACACTCTTTGATAAAAGAATCACAAATGTCTGTTATTTTTGCTATCTCTTTCAAAAAAAGAATATACATGCATATAGTTATGACTTA TGACCCATATATTGGTGCCAGATTCCTCTTCGGTAATGGAAAGATTATGTATGAATAAAAACATTAAAATCTCAATAGACAATTATATTTGTATCTTTTA TTTTAT BLAST |
Tissue | flowers |
Gene name | LI_gene_33893; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_128286
Blastp | Probable beta-D-xylosidase 7 from Arabidopsis with 57.87% of identity |
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Blastx | Probable beta-D-xylosidase 7 from Arabidopsis with 58.06% of identity |
Eggnog | hydrolase family 3(COG1472) |
Kegg | Link to kegg annotations (AT1G78060) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461481.1) |
Pfam | Glycosyl hydrolase family 3 C-terminal domain (PF01915.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |