Ll_transcript_180585

• Id Trinity: FTRINITY_DN53501_c0_g2_i1
• Name Transcript: Ll_transcript_180585
• Sequence: AACTATTATTATGTGGCATTGAAGCATTTCCCTGTAAAGAAAGTAAGAAACCGTTGATTCTTCCTGTTTGGGAAGATTGAAATTGATGATGGCTCTGAAG CTTAAAACATGTTTGGTATGTTGGAATTTGAACCTTACTTCTCCCTTCAATTGTAACAATCATCATCACCATCATAATGCTCTTCTCTCTTTTCCTACTT CAACATCTCACCGCCTTCTTCACGCTTCCTGCAAAATGCGACACCGCCCTCTCCGTTCTCAGCAGAAAAAGCAACAGATCAAGAAGGCTTCTAATGAAAA GCCTGCAAGTCCAAATCAAGATGATAACTCAAAGGTTTCATCGGATACAACCCCAGATTTGAACAAGGAAATCTTAGGTAGTACTCACACCGAAAACAGC GATTCTGGGCAGCATACCAATGACAATGAGGAGATTTTGATCCGGAAGCCTTTAACAGATGGAATTGGAAATCCACATCTAAATCAAAATGAGGACTCAA ACGTTTCACTTGATACAATCCCTCATACCGAAAACAGCGATTCTGGGCAGATTACCAATAAGGAGATTTTGATCGGGAAGCCTTTAACAGATGGAATTGG AAATCCACATCTAAATCAAAATGAGGACTCAAAGGCTTCATTGGATACAGTCCCTCATACTGAAAACAGTGATTCTGTGCAGCATACCGATGTGAAGAAT TTGAATGGTCCGAATGTACAAGCTCAATCGACACCATTGGGCATATACTTGAATGGAGCAGAGCAGGCTGAACAGTTGTCTGGTGGTCAATTGGAGAATT TGCTAAGCTTGATAAGAAAAGCAGAGAAAAACATCCTTCTTCTGAATCAAGCTAGAGTTCGTGCACTTGAAAATCTTGAGAAGATCCTTGCTGAAAAGGA GTCATTACAAGGAGAAATAAATGTCTTAGAGATGAAGTTGGCTGAGAGTGATTCACGGATTAAAGTTGCCACCCAGGAAAAGATAAATATGGAACTCTTG GAGGACCAGCTGGAGAAACTGCGTACTGAGTTGGCCAGTAGGGGCAGTACTGAAGGAAGCAACGCTGAATTTTATGAGCATCAAATTGGAGTTTTGGGTG ATAAATACCCTCTAAGTCATAATGATAGCATTCATTCTCTTACCGAAGAGCTTAATTCATTAAGGGAAGAAAATACGTCTCTGAAAAATGCCATAGAGTC GTTTGAAACACAGCTTAATGATGTCAAGGACACTGATAAAGATCTAGTGATATTGGAAGAGGAACGGGCATCTTTTGAGTCAGCCCTAAAAGAGATGGAA TCAAAACTATTAATGTCTCAGGAAGACGTGTCAAAACTGTCAACACTAAGAGTCGAATGCAAGGATTTATTGGAAAAGGTTGAAAATTTGCAATTGTTGT TGGATAAAGCAACCAAACATGCTGATCAAGCTACTACAATGTTGCAACAAAACCAGGATCTTCGAAGGAAGGTTGATCAATTGGAAGCATCCCTTGATGA AGCTAATATGTATAAGCTATCATCAGATAAATTGCAAAAATATAATGAACAAATGCAAGAAAAGATAAAAATATTGGAGAGCCATCTTCAAAAGTCAGAT GAAGAGATACACTCTTATGTTCAGATGTATCAAGAGTCCGTGGAGGAATTCCAAGATACACTTAATACTCTGAAAGAAGAAAGCAAGAGAAGGGAACTTG ATGAACCAGTAGATGATATGCCATGGGATTTTTGGAGTGGATTGTTGCTTATGATTGATGGTTGGTCACTTGAAAAGAAAATATCAATAGATGATGCAAA ACTTCTGAGAGAAAAGGTGTGGAGGCGAGACAGGCGTATTAGTGATATATATATGGCTTGCAAAAAACAAAGCGAACATGAGGCTATCTCTGCCTTTCTT GGGCTTGTAGCATCTGCAACAAGTCCAGGATTATATGTGATTCATATTGCAGCTGAGATGGCACCAGTAGCGAAGGTTGGTGGTTTGGGGGATGTTGTCA GTGGTCTGTGTAAAGCATTACAAAAGAAAGGACACCTTGTTGAAATTGTTCTTCCCAAATATGATTGTATTCAATATGACCGCATCCGTGACTTTAGGGC TTTGGATGTGATGATAGAGTCATACTTTGATGGTCAATTATTCAAAAATAAAATCTATGTTGGCACTATTGAAGGACTTCCTGTTTATTTCATTGAGCCT CATCATCCTGACAAATTCTTTTGGAGAGGGAATTTTTATGGAGAGCATGATGATTTCAGACGCTTTTCTTATTTTAGTCGTGCAGCTCTTGAGTTTCTTC TTCAAGCTGGCAAGAAGCCAGATATCATTCATTGCCATGATTGGCAGACATCATTTGTTGCTCCTCTATATTGGGATATATATGCCCCAAAAGGATTAAA TTCTGCTAGGATATGTTTTACATGTCACAACTTTGAGTATCAAGGGACTGCACCAGCTTCACACCTAGAATCATGTGGTCTTGATGCTCACCATCTAAAC AGACCAGATAGAATGCAGGACAACTCAGCACATGATAGAGTCAATTCTGTCAAGGGTGGAGTTGTTTTCTCAAACATTGTGACAACAGTATCACCTACCT ATGCCCAAGAAGTGAGAACTGCTGAGGGAGGACATGGCCTCCATTCCACTCTTTCTATTCATTCCAAAAAGTTCCTTGGTATTCTTAATGGTATTGACAC TGATGCATGGAATCCTGCCACTGACACATTTCTTGAAGTCCAGTACAATGCAAATGATCTTCAAGGGAAAGCACAAAATAAGGAAGCCTTGAGAAGGGAC CTGGGTCTTTCATCTGCAGATGTTCGGAGACCATTGGTTGGGTGCATAACAAGACTGGTTCCACAAAAAGGTGTTCATCTTATTAGACATGCAATATATC GGACATTGGAGCTGGGAGGACAATTTGTTCTTCTTGGTTCAAGTCCAGTGCCGCATATTCAGAGAGAATTTGAGGGCATTGCCAACAACTTTCGGAATCA TGATCATGCAAGGTTGATATTGAAGTATGACGAGTCTCTCTCCCATGTCATTTATGCTGCATCTGACATGTTCATCATTCCATCAATCTTTGAACCTTGT GGCCTAACACAGATGATATCAATGAGATATGGTGCCATACCCATTGTTAGAAAAACCGGCGGCCTAAATGACAGTGTTTTCGATGTTGGTGATGATACAG TACCTTCCCAGTTTCAAAATGGATTTACATTTTTGAATGCCGATGAGCCGGGAATAAACGGTGCTTTGGATCGCGCATTTAATCTCTACATGAACAACCC CGAGATTTGGCAGCAGCTTGTCAGGAAGGACATGAACATGGATTTCAGCTGGGACACTTCAGCAGCTCAATATGAGGATATCTACTCAATGTCTGTGGCT AGAGCAAAGGGCTACAAAAAAGTGATTAATTGAGCAAAAAGAAGCTTTGTTGTGCTATCCATTCAATTTTGCCAGTTTTCTACACTGAGGTTGAAGAGAC TTCATAATAATCATATTCACTATATTCAGATGGGTGGGGATTAGAGAGTAAGTTTAAAAGACTTATTTTTTATCTTATACCATCAATTTATTGGAAATCT AATAATTCAGATTTACCACTAATTCAAACTATTGGATTTCGATAGTATAAAAAGAGGATAAGTCATTTAAACTTAGTTTTGGAGTAATCCCTCCCTTATT CAGATTTGTATGGAATAAGTAATAGCAATAATAACCAATTTCAG
• Tissue: flowers
• Gene name: LI_gene_34234;
• Additional information: details;

Expression of Ll_transcript_180585

FPKM

• FPAB: 0.6
• FPNAB: 0.2
• LF1: 0.6
• LF2: 0.2
• LF3: 1
• LF4: 0
• UF1: 0
• UF2: 0.4
• UF3: 0.6
• UF4: 0.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_180585

• Blastp: Probable starch synthase 4, chloroplastic/amyloplastic from Arabidopsis with 59.57% of identity
• Blastx: Probable starch synthase 4, chloroplastic/amyloplastic from Arabidopsis with 68.31% of identity
• Eggnog: starch synthase activity(COG0297)
• Kegg: Link to kegg annotations (AT4G18240)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434541.1)
• Pfam: Starch synthase catalytic domain (PF08323.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;