Id Trinity | FTRINITY_DN53540_c0_g1_i3 |
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Name Transcript | Ll_transcript_180489 |
Sequence | ATAGAGTCAAAATTCCAAAGCTAATGGTTCTCTGTACGCGCGATTGAAACCAACGGAGATCATATCATAACCGTTGATCTATTCTCCATGTCATGGTTTT CTGATATTAACCGTTAGATGAAACTGATTTCATGATACCAAATGAGCCTTCCCGCATAGGATAATTTCCATGCAAGGATGTAGGGGACAATGAATTCCAC TATTCCTTCATCAAAGGTTCATGTCCGAAAATGAAATGAATCAAAATTGTATCCGAGAGTGCTCAACTACACACAACTGATATTGAATTGATTCAATGGG GTGCTAACTGTTAAGTTCATATATTGAATGGCTAGTGCATAATGACAAATTATTTTTTTAGTTGAAGTGAACATTTTCTGATAGTGAGATCGGAGTCATT GTGTAATTTCATGTGTTGGTTGCTAGATATAGTTTACTGAAGTAGTGAGAATAGAAGTTCATTTGGAGCACCATGGATTTGCATTTGAAGAATTTGTTTG GAAGATTTCAGGAGCAGTTTGGGTCTGGACCTGGATTAGGTCCTGGATCTGGAACATGCCTGATGAAAGTTGATGGTATTGATCCTAATTTCATTAGATC TTTATACAAAGCTTCTGCGGCCTTATATCGAACTGAGCCGTGGAAAAGATTGCGTCCAGGGCATTATTTCGGTGTCCGGGTTGGGAAGGATTCAGGGTGG ACTGACAAGAAGCAGCCTTTCCTTTGTGTCCAGTTCATTGGAGGGGGTGGAGGGGATGTTGGGTTCTATATGTTCAGATCGGAAAGTGATGCTAAGAAAA TGACAGGGCCTAGAGAGACCATTCATGTTCCGAATGTTGAGCTTCTGAGGGTCACTTATGAAGTGGAGTCCTTGATGTTCCCTTCTAATCGCAAAATGAT CAAGACTTTGTCACTGGAAGCGTCAGGTACTGATCGATTTCCTGTTATCGATGTAACTCGCTGCATGCCTGGTGGTGATCTTCGATTCAGAAATCCGTCA TTTGAAGAGCTCAGGTTTGTCTATGCATTCATGAAAGCTATTTCTATGGTGCACCCCTTGCTTATGCAGTTAGACAAGGAAGGTGGTCCGAAATATTCAA CAATGGCGTATTTTGAACCTTTCATTGAGACGGTTGATGTTCAGTGGCCTCCAGAAGTAACAAAGAGAGGTTATGATCTTGTCGCTGTTACTATCTCGCA CCCACCAGGTCAGGTATATGAAGAAAAAGGTGGTATGAGTGCTGGCTCAACCCCAACCAAATATAGAGAGTCGCCGGGGGAGGGAAATTTCAATGAAACA AAAGTGTATTCACATGCTGGATTGAGACAGTGCGCAATGTGTGATAAAGAAGTGCATGGAGAACACTCACTTTGTTGTGGCCAGTGTAGATCAGTCATTT ACTGCAACTCATTCTGCCAGAAGCAACACTGGAACGACACACATAAAAGCATGTGTGGACTTTACAAGGCCATGATGGAAAGGGAAGAAGAGTTGGCTAT AAAAATTTTCATGTTCCCATGTTCCGCCGACCAGCCTTGTAAGTGGCTTGAATCCTTAAGCATCCACCAGAAAGGTATGTGGAGGAGAAAGTGCAGTTGC TATTCACACTGCGCTTTCGGTCTCCTCCCTGTGAAAGGTGGGCTGCAAGAACTATGGGGCGGACTTAACGAGTTTGAATATCCTCACGACTTTCCTTTTA ATAACCATTACGTCTCAAGCCCGTTTCACCTCTCTGGTTGGTCAGAGTACTACAACCTTCGCTCGCTTTCACTGGCGAGTCCTGTTGCAGACATTCTCTC GCATCCGTTGACAGTGTATCACATACTAACTACTCTTAATATAAGTTCAAAGAATCTTGTACTGAAAGGGAAGGAGGTGATTGTTCACTACCTTGGACCT GAAGGTGAGTTGGATTGGATGCAAGCATTTGCCGAAGTAGGCCACTTGCTTAATGGATTGGGCAATGTACAAATAGTGATGGTGGGACCGGAAGTTCCAA CAAATTTGTCTGGTACAACTTCTGGAATAGGTAGCAGAGTTAGAGTGAACTTTGTGCGAGGTGTTTATCAGGTAGAAGCCTCCTACCTACCTACTCCGCA TGCTGTCATAGCTCTAAACTCCGATTTAGAAAGGTATTCTAGTTGGGGTGGAGCTCTTGATTTAATCAAGTTAATGGCTGTGCCTGCATTCTTCACTGAG CAATCTGAAGTTTCATGTGTAAATGCTAAACAAGTCCTTCGTAATGCTGGACTGCACATCACACAACCGGTGACTCCTAATCCTTTTCGATCGCCTGTGA AAAATCTCACCCCTTCTAGCAATCTTCCTTCATACAGCAATGGTTTTGTTTTTGGGGTAAATACCTGAATGCTGTCCTATAACTCCAAAAACATGTCTAT CTACTGTCATTGATTCATAGGGTTGCAGCAATCTTCGAGTTTTCGCAGTTGTTAATTTGTTATACGGTCTGCTGAACATTACAGCAAAGTATGGAGATCC TTGTGAGTTTGTTCAATATATGAATATAGACTCTGCTTGGCATTGTCTCTTTTGAATGTTAGAATTATGACTCTTGTTTTTGTGCAAATTATTGTAATGT GCCAACATTTTCATAGGTTCTTTCATCACATTGAAGTTTATGAAATTTATGTTTCATATAATCTTGTGCACAAAACCTTAACCAAGTTTGTAAAAGTTGA AATCAAATATGAGATTGCTCAACACATAGCACCCG BLAST |
Tissue | flowers |
Gene name | LI_gene_34610; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_180489
Blastp | Zinc finger MYND domain-containing protein 15 from Mus with 28.53% of identity |
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Blastx | Zinc finger MYND domain-containing protein 15 from Mus with 28.53% of identity |
Eggnog | zinc finger, MYND-type containing 15(ENOG4111I8B) |
Kegg | Link to kegg annotations (574428) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419631.1) |
Pfam | MYND finger (PF01753.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |