Ll_transcript_180130

Id TrinityFTRINITY_DN53571_c3_g1_i15
Name TranscriptLl_transcript_180130
SequenceGTGCAACCCGAGTTCTTTACAGACAACAATTTAAAACATCATGCCTTAGACTATTTGCTTATTCATGTTCCTTGTTAGAAAAATTGAAGTTATGATTGGC CAGCAAGAAGGGTGAATAAGTAATTACAAGTGTGTATTTTCTATTTTGTTTTGTTTGTTTCATTGCAGAATCTTTGCTCTGCCACGGAATGTTGCAATTT GGCTTTTTATGATAATTATTGGTGGTTCATCCATGTAACTATATTTGTTTGTAGCCCCTTAATGCATTTGAGTTGATTATTGAATATTGATAATGATTTT GAAGTCTTTTACAGAAGCAAATCTCAGTTACTTTATGAAGATTTAAACTTGAATTAGATGGGTTGTGGCTGAGATAGTAAGATTTGATTTTGGGAATTGG ATTCTGGAGTGTGACTAGGCAATATGATATTTTTAATGGCATAGCATAATCTATGGCTGTTGCTCTTGGCAGAATGCTTCCACTGGTTTATGGCTGCACT AAATTGGAACTTTATGTGGTATTTAAAGTGCATATCTTGCTTTAAAATCTTTTTGCGTATACCACATTTCTAGTTTGAAAAGATTAAGTCGAATTTGTTT TTAACAAGTTTTTGGAGATGCAATATTTTATTATTTGTCAATTTTTCGTTTAACCAGCAAATTCCAATTGTCGGTATGGGCTATGGAGCTATGGGTAGTT GCTAATAATTCCTTAATTCAATATGTGCATCATCCATGTTTGAAATTTGAAAGTATGTAATTGATTTTCCGTTGATATTGCTACTATACTAATATAGAGG TTGAGTTTAGTGCAACAGCCCGTTTTTATTGCTACTATACTAATATGATTTACAGATTAGGGACAAATGCAAGTCAGTTGGCAGTTGTGGCATTCTCCAG ACTACAAAAGGAGATTGCTAAAGATGGTAGAGAACCGAATATGGTGTCCAATGGGGTGCATAACAAATCCGTTTCAAGAAAAGGTTCCGATGCAGGATCC TCTGCCACAACAAAAGAGATGAGTGCCCTGTCACAGTTCTGTGTGGATCTCACTGAACGTGCGAGCGAAGGGCTAGTCGATCCAGTCATCGGCCGAGAAG TTGAAGTTCAGAGAATTATTCAAATACTAGGCCGGAAAACAAAAAGCAATCCCATTCTTCTTGGTGAAAGTGGTGTCGGAAAAACAGCTATTGCGGAGGG GCTGGCAATTCATATTGCTCGGGCGGATATTGCTCCTTTTTTATTGACAAAGCGTATCATGTCGTTGGATGTTGCAATGTTAATGGCTGGGGCAAAAGAG AGGGGAGAACTAGAGGAACGAGTTACGAAATTAATAAAAGAGATAATAAAGTCAGGTGATGTCATTCTTTTCATTGACGAAGTTCATACACTTGTTCAAT CAGGGACAAGTGGGAAAGGAAATAAGGGATCTGGCCTTGACATTTCTAATTTACTTAAACCTGCACTTGGAAGGGGTCAATTTCAGTGTATTGCATCTAC CACCATAGACGAATACAGGCTTCATTTTGAAAAAGATAAGGCATTGGCACGAAGATTTCAACCTGTTTGGGTTGACGAGCCAAGTGAGGATGACGCAGTT AAGATACTTATGGGTCTACGCGAGAAATACGAGGCACATCACAAATGCAGATTTACTGAAGATGCCATAAAGGCTGCAGTTAATTTGTCATCAAGATACA TATGTGATAGGTATCTACCTGATAAAGCGATTGACCTCATTGATGAAGCAGGAAGTAGAGCTCATATTGACGACTTTAAGAGGAAAAAGGAACTAGACAA TTGCGTACTTTTGAAGAGCCCCACTGATTACTGGCAAGAAATTAGGGATGTCCAGGCCATGCATGAAATGGAGAGCAAACTTAAATACTATGGCACTTCT AGCATTGATGATACTAGTGAACTTATAGTGGACTCATATTTACCTTCTGAAGCCAATGATAACGAACCTGTAGTAGTTGGACCAGAAGATATAGCAACTG TTGCTTCCATTTGGTCAGGAATTCCTGTTCAGCAGCTCTCTGTTGATCAAAGAACTCTGCTCCTAGATCTTAATAATCAACTTCGCAAACGTGTGATTGG ACAAGACGAGGCTGTTCTTGCCATTTCTCGAGCCGTGAAGAGATCACGGGTTGGCCTTAAGGATCCTGATAGACCCATAGCTGCAATGCTATTCTGTGGC CCAACTGGGGTTGGGAAAACTGAACTTGCAAAATCTTTGGCGGCATGCTACTTCGGATCAGTAAGATTTTACACATAATATATGATTTAGCATTAACAAT TAGAAAGTGTTCTTTTTGTAAAAAATGAGGACCATTTCCCCCCTGCTTTTACATAATATGCATCTATTTGGTTGGAATGCTGATGTGAAATTAAACCCTT TAGAAATCTACTATTTTGTAATGAAAATTGAATTGGGGATAATTTTGTAGGAAAAGTTACACATTACAAGGATTTAAATATAAAAGTATAAAATAACAAT ACCTAGACTATTAATGATATCGGCAATATAATTCAGTTCACCTTATGGAGTAGTTTTTTTTCCTCGCTGTTAGGGTCCAATCATAAGGTATATCACATGA GTGCCACATCGGAAGGATGTGATTTTTGTATGGGTTTATACGGCCTTCTGCTCTTGAACCCTAAGGCCTAGCTTTTGTGGTATGGTTTTCAGAACGTCTA TATCAATTGGTATCAGACCTTTTCCGCCGAGTCTATTGATTGCAAACACGATGGTGATGTTAGCATTGCCTATTTGCCCAAGACTAGTCGGAGAGCTAGT GCGCCACCAGCTTGTGTGGGCAAGTTGGCCGATGTTCATGACTTATTGTTATCAATGATCACCTGAACAGGAATGGAAGGACCACATATTTCCTGTTGCT TTTCTTCTTTGTTTTTTTGGACTACAATGATTATGCTATGGTTGATGCATGCCACATTAATTGTTTATATATAGTTTTTCTTATTATTATTACTATTTTC AGGAGGCTGCCATGATAAGATTAGACATGAGTGAATATATGGAACGGCATACCGTGAGCAAATTGATAGGATCACCCCCAGGTTATGTTGGTTATGGAGA GGGGGGCATTTTAACCGAAGCTATTAGAAGAAAACCATTCACACTGTTATTGCTTGATGAAATAGAGAAAGCTCATCCGGATATATTCAACATTCTTCTT CAATTGTTAGAAGATGGGCAGCTTACGGATTCTCAGGGTAGAAAAGTTTCATTTAAAAATGCATTGGTAGTGATGACTTCGAATGTGGGGTCTAGTGCCA TTTCGAAGGGCCGGCACAACTCCATAGGGTTCTTGATTTCAGATGACAAGTCTACATCTTATAATGGCATGAAATCAATGGTAATGGAAGAACTGAGGAC ATATTTTCGCCCAGAATTGCTTAACAGAATAGATGAAGTGGTAGTGTTTAAACCTCTTGAAAAGTCACAGTTGCTCCAAATATTGGATATGCTGCTTCAA GACCTAAAGAAAAGGGTCATGACCCTAGGAATTGATTTAAAGGTGTCAGAATCAGTTAAGAACCTTGTATGCCAACAAGGTTATAACCCAACATATGGTG CCAGGCCTTTAAGGAGGGCTATTACATCAATAATTGAAGACCCCTTGAGTGAAGCATTCTTAGTTGGAAAGTGCAAGCAAGGTGACACTGTCTTCATTGA TTTGGATTCCAATGGTAACACCATTGTTACAAATAATATTGATCAGATTGTGAACTTATCTGATACAAATCATCCATGTAATTAACAATTGTATAGAAGT AGTATGATAGGTATACATATATAATTACACATGTATTGAAGTTGTTTTGGCCCTTGAAGCTAGCTTAGGAAGTTTATATAATGTAATTAGCTCATCCATC ATTCTTTGAAATTTATGAAAATATATCCATATTCTCTTATCTTGCATATTTCTACTACTTTAATTTGAAATCAAAA BLAST
Tissueflowers
Gene nameLI_gene_34864; 
Additional informationdetails; 

Expression of Ll_transcript_180130

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_180130

BlastpChaperone protein ClpD, chloroplastic from Arabidopsis with 69.54% of identity
BlastxChaperone protein ClpD, chloroplastic from Arabidopsis with 69.54% of identity
EggnogATP-dependent CLP protease ATP-binding subunit(COG0542)
KeggLink to kegg annotations (AT5G51070)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019429737.1)
PfamATPase family associated with various cellular activities (AAA) (PF00004.28)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;