Id Trinity | FTRINITY_DN53573_c2_g1_i8 |
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Name Transcript | Ll_transcript_180037 |
Sequence | AAACAGAAAAAGCACAAATTTTGACCTTCATTCACCAGTTATCTAATTTCCTGAACAACCAAACAGGATATCAATTAAACAAAGAATAACTAAACAAAAA ATAAAATAAAGATCTAAATACAACCGGTGGTGATAAGAGAGAGAAATTTGAAAGGATTGAAAGTGAGAGAAAAAATGGATGTTTGTACCTTGAAAATGTT GAATTGGGTTTGGAGGTCAAAGTTGGTATCTTTCATAGCGAATGAGCTTCGATGTGCTCCCTTGGATCTGATCAGAGAACAGAGAGAGAGAATCAAAATC TAACATTGTCTTATATTAATTATATTTTTTATGTAAGTACATAACACTTCAAATAATGGATTTACACTATCAGCAAATCATCCACCTTGAACTATCTAAT AAAAGTAATATAAATCAATAGCGGATAATGGACTGACGGTATAAACAATATTATAATGACTCAATATTCAAACTAAAATCTACAATATTTTGCTAGATTA AAAATACAATTTTTCTTTCAGGGACTAAATCTTTGATAAACTAAAAAGTTAAAAAGAAAATTGAATGTGACTGAAGACTTGCATCATCTTTGTTAGAGGT TGACTTCAAACACTCTCCAATTCTGATATAAGAGGTAATCTTATTTCTTATTTCATTTTCTTTTATGATTTCGAAGTGTTCGATAAAATGCCCCTGTGGC TGTCTTTGCAGATATTTCATTCATGGTTTTGATAAAGACATTGTTATGCCTTCGTCGTTTCTACGGCACCAAAGTGGACCTGAGGAAGCTCCGACCCATG ATTCTCGACCGAATCGAGAAACGGGCACACGCTTACCCGGTTCGCTCCATGGTCCCCGTTGCAAAGGAGGTTCTCCTCGCTAGGAATGCTCATATCAATG GCGTTTCTACCCTCCTCAACTACATTCCCATCATGGCTTGCAAGTTCTGTCCAGAAATATGTATTGGTGAGCAGGGACATTTAATTCAGACTTGCTGGGG TTACAGGCGTCGTGCAAAGAACCGGATTCATGAATGGGTCAGTGGTGGTTTGAATGATATACTTGTTCCTGTTGAAACATATCAACCGCACAACACGTTC CAACATGTTATTACACACAATCAACGGTTTGACTGTGATCGCATCTCTGCCATTGTTGCGCTATGCTTGCAAGCAGGGGCTGATCCCCATGATGAAAACC TTAATTCAAGTAGTACGAACTTAGATGCTGTCGGTAACAAAGTCAATGGAACTGAATCTTTGTCGCCCAAAGATCTTGCCTTTGTAGCAAATCAAACATT CAATGCTTGGGAGGCTCTTAGGTCTGGGGTGCAGAAGTTGTTGTTGGTTTATCCAGTAAAAGTTTGTAAATATTGTTCTGAGGTTCATGTTGGGCCATCT GGACACAAAGCTGAGCTCTGTGGCATGTTTAAGTACGAGAGTTCGAAAGGAGCTCACTTTTGGATGAAAGCTAATGTTGATGATTTAGTACCTCCAAAGA TTGTATGGAGACGGAGGCCTCAAGATCCTCCCGTGCTTGTGAATGAAATGAGAGATTTTTACGGACGTGTTCCAGCTGTATTGGATCTATGCACAAAAGC TGGCGCCATTGTGCCTGTAAAGTATAATTGTATGATGAAAGTGCAGGGTTTGTCTACTCCTGTCAATAATAAAATTTGGCAGGAGCATTAGAGAAACAAA CTTTTGAAAGAAAATTGGTAAATTGAGTTGATGGATTGATTAGAATTTGGAGCTCAATCAAGGACAGTTTGTGAGATAACCTGATATGTCATTACTTTCG TCGGCAATTTTTATAATTTTAGGATTGGCTGGAATATCTAATTATGGATCCATATGCCTGTTCTTCAGTTGTTTCAGAAAGAACTCTGGTGCAGTGGTGC CTATATCTCAAATCTTACAAAATATTTACTATCTGCTGAGCAGATCAACACCCCTTTCTCTATATATGCAGCTGGACATAATGGACCCGTGTCTCAGGTT GGAATAAAGCAATTTCATGTTCTACTTCTCCAGTCTATGGTTTCTGTTCTTTGGATTCATCTTGTTTCTTGAGGAACATAAGTCTAATGATTGCTGGAAA CATGAGCAAGGCAGATACTAAATTGCTGTAAATGTTTGCAATAGGATCATCACTGCCAAAGAAAAAACTGTGTAGAACTAAAATTTCATTTTCTTTCAAA TGCTTAAATTGTGAGTGAATCTGAGACAATGAATATAATGATTTGGTTATTGTTAGTTTTTTTTATATTTATTATCGCCCAATTGTAATATAATAATCCT BLAST |
Tissue | flowers |
Gene name | LI_gene_34874; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_180037
Blastp | APO protein 4, mitochondrial from Arabidopsis with 57.33% of identity |
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Blastx | APO protein 4, mitochondrial from Arabidopsis with 57.33% of identity |
Eggnog | APO protein 4(ENOG410YFGI) |
Kegg | Link to kegg annotations (AT3G21740) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019457357.1) |
Pfam | APO RNA-binding (PF05634.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |