Ll_transcript_180385

• Id Trinity: FTRINITY_DN53592_c3_g5_i1
• Name Transcript: Ll_transcript_180385
• Sequence: CATGTATACAGTGGCATCCATCTTGTGAAAGAGATAGCGAGGAAAGGAAAGTATGTCGAAAAGCGTAACAAACTTGAGCACCGTTACAGCTTATCATCAT AGCCACGGAAACAACTCAATCTATCTCAATTCTCCCAACTCTTTCATCTTCTTCGGACAATCTTCAACTAACTCCAACCTTTCCTGTCGTACCACCAATG TCGCTGTCTCTGTCTCTTTGTCCCACACCACTCACAACACAACCATATATGATAATGAAAATGCAACAATTTGCAAGTTCTGCGAAATGGGTCATCTTAG AAAATCCATGGAGTTGCTTATAAAGTCACAAAAATCAAAACTTGAGTTGAATACTTACTGTTCTGTGTTGCAGCTATGTGCTGAGCTTAAATCTCTGGAA GATGGGAGAAGGGTTCATTCCATTGCCATTTCCAATGGTATGAAGATTGAAGGGGCTTTGGGGGCAAAACTGGTTTTCATGTATGTAAATTGTGGTGATT TAATTGAAGGGAGAAGGATATTTGATAAGATTCTCAATGATAAGGTTTTTCTATGGAATCTTATTATGACTGAATATGCAAGGATTGGTAATTATAAGGA ATGTTTGTGTATTTTTAAGAAAATGCAGGAGTTGGGAGTTGCAGGGAATGCTTTTACATTTACTTGTGTGTTAAAGTGTTTTGCTGCATTGGGGGAGGAA ATGGAGTGTAAAAGGGTTCATGGGTATGTTTATAAACTTGGTTTTGGTTCTTATAACGCTGTTGTTAACTCTCTCCTAGCGGCTTATTTCAAATATGGTG GTGTTGAGAGTGCATATAAGTTGTTTGATGAATTGAGTGATCAAGATGTTATCTCATGGAATTCTATGATAAGTGGTTGTGTGATGAATGGTTTTTCCAG AAAAGGGCTTGAGCTTTTCATTCAGATGTTGATTTTGGGTGCTGATATGGACTCGGATACCTTGGTTAGTGTTCTTGTGGCTTGTGCGAATGTTGGGAAT CTTTCATTTGGTAGAGCTCTTCATGCTCTTGGAGTGAAAAGATGTTACAGTGGGAATGCCGTGTTCAACAACACCTTACTGGACATGTATTCAAAATGCG ATAATTTAAATGCCGCAGCTGATGTATTTGTAAAGATGGGTGATAAAACGATTGTTTCATGGACTTCAATTATAGCTGCGTATGTACGGGAAGGTCGATA TGATGATGCTATTGGGTTATTTGATGAAATGCAAAGCAAAGGTCTTAAGCCAGGTGTTTATACTGTCACAAGCATCGTTCATGCTTGTGCTTGTAGCAAC TCCTTGGATAAAGGCAGGGAAGTACATGATTACATTACAAAGAACAAGATGGGGTCAAGCTTGCCTGTCTGTAATGCTCTCATGAATATGTATGCAAAAT GTGGAAGCATGGAAGAAGCTCATATAATTTTCTCTAAAATTCCAGTTAAGGATATTGTCTCATGGAATACCATGATTGGAGGCTATTCAAAAAACTCACT TCCGAACGAAGCTCTATATCTTTTTGTTGACATGCAAAAACAATCAAAGCCTGATGAGATTACAATGGCTTGTGTCCTTCCAGCTTGTTCTGGTTTATCA GCTCTAGACAAAGGCAGAGAGATACATGGGCACATATTAAGAAAGGGGTACTTTTCAAATCCGAATGTATTGGGTGCACTGGTCGATATGTATGTGAAGT GTGGATTACTAGTTATTGCAAAGCTACTCTTCGATATGATTCCTAAAAAGAATCTGGTCCATTGGACTATTATGATAGCTGGATATGCCATGCATGGTTT TGGAAATGAAGCGATTTCCACTTTTGAAAAGATGAGGAAAGCTGGTATTGAGCCTGATGAGACTTCCTTCACTTCTGTACTTTGTGCTTGCCGTGATTCT GGATTACAGAAAGAGGGGTGGGTATTCTTTAATTACATGAGAAGGAAATGCAGCATTGAGCCCAAATTAGAACACTATGTCTGCATGGTGGATCTCCTTG CCTTATCTGGTAATCTATCCAAGGCATACAAGTTCATTGAGACCATGCCAATTAAACCAGATGCTACTATTTGGGGTGCCTTGCTTTCTGGATGCAGGAT CCATCACGATGTTGTGCTAGCAGAAAAAGTGGCGGAGCATATTTTTGAGCAAGAGCCAGAGAACACAAGATATTATGTTCTTCTAGCGAGCGTCTATGCA GATGCAGAAATGTGGGAAAATGTGAAGAAGTTTCAAGAAAAGATTCGTAAACGGGGATTTGAAAAGAACGCAGGCTGTAGTTGGTTAGAGGTCCAAGGAA AAT
• Tissue: flowers
• Gene name: LI_gene_35077;
• Additional information: details;

Expression of Ll_transcript_180385

FPKM

• FPAB: 1
• FPNAB: 0.5
• LF1: 0.4
• LF2: 0.4
• LF3: 0.6
• LF4: 0.9
• UF1: 0.5
• UF2: 0.5
• UF3: 0.7
• UF4: 1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_180385

• Blastp: Pentatricopeptide repeat-containing protein DOT4, chloroplastic from Arabidopsis with 54.45% of identity
• Blastx: Pentatricopeptide repeat-containing protein DOT4, chloroplastic from Arabidopsis with 54.45% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT4G18750)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464352.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;