Ll_transcript_182174

Id TrinityFTRINITY_DN53594_c1_g3_i3
Name TranscriptLl_transcript_182174
SequenceGGGATCTTTACACTTGGGGTGATGGTACTCACAATTCTGGTTTGCTTGGGAATGGAAATGAAGTCAGTCACTGGATCCCGAAGAAAGTAAGTGGTGATAT GGAGGGTGTACAGATATCATTTGTTTCCTGTGGACCTTGGCATACAGCTATTGTTACATCAGCTGGCAAGTTGTTTACATTTGGGGATGGATCTTTTGGT GCCTTGGGTCATGGAGATCATAGTAGCACAACTATTCCTCGTGAAGTAGAAACTTTGAAAGGATTGAGAACAACCTGGGTTTCTTGTGGTGTTTGGCACA CTGCTTCTGTTGTTCAGGTGAATGAATCTATGGAATCTTCAATGCAATCACTCTGTGGAAAACTATTCGCCTGGGGTGATGGGGATGAAGGGCGACTTGG ACATGTTGATAAGAAACCCAGACTAGTTCCTGATTGTGTAACGACATTGAATAATGAAAATATTTGTCGAGTGGCTTGTGGCCAAAATCTTACAATTGCA TTGACAACCTCAGGACATGTATACACAATGGGTAGTGCTGCTTATGGACAACTTGGATGTCCTGCATCTGATGGGAAAGTCCCTGGACGTGTTGAAGGTG AGCTTGCTGACAGTTTTGTAGATGATATTGCATGCGGCTCTTACCATGTTGCAGTCCTGACTTCTAAGGCAGAGGTTTACACTTGGGGAAAGGGTTTGAA TGGTCAGTTAGGCCATGGAGACATCGATCACCGGGATAAACCTACACTTGTTCCTTTTTTAAAAGATAAGCAAGTGAAGAGTGTTGCTTGTGGTTCAAAT TTCACTGCTGTTATATGCCTTCACAAATGGATATCAAGTGCTGATCATTCTGTATGTTCTGCTTGTCGTAACCCATTTGGATTCATAAGAAAACGTCGTA ATTGTTACAACTGTGGACTAGTGTTTTGCATAGGATGCAGTAGCAGGAAATCTACGAAAGCTTCACTTGCTCCAGATGCCAACAAGCCATACCGGGTCTG TGATGACTGTTATTCTAAACTAAAGAAAGCTGAAGAATCTATATCCTTAGTTCAAACTCCTACCTCCAGAATTGTGAGTGCAAATGACACTAGGGCTACT AAATTACAGGCATCGCTATCAACGCTTGCGCCTGTTGGTTCTATTGTTCGAGGAGCAAGCAAATACAAAAATCTTCCAGAATTGCATGATAACCATGTTT TTTCAGCTCTGAGTGGAAAACTACGGCTGGGGACTCCTCCTATAAAAGCATCAAATTCCCATTTTAGAACACCAAGGAAGCGCCATTCAATTTCTGTGCT TCCTTATAGAGGGGCTTCTCAATCATCTTCTATTTCACCAAAGTCAAGCACACAACAGTCTTGTACAGATATCCATGATAATTCAAAGCACATGAATGAT ATTCTAAGTCAAGAAGTTATATGTTTAAGGGCACAGGTAAATCTTCTGAAATACCTTTTCCAACCACACATCCTTCTGTAAACCTTTGCTATAAATTCTT ATGAAACAATAAATCCTTAGGTGTGATATGGTATTTTATTGACATGTCTTCTAGTAATAAAAACACAGTGGAACTTCAGATTCTCTTTGTTGTGGGTTAC CCTTTATTATTTTTATTACCCTCAAATAAACTAAAAGCAGTTAGGAAGAAAACAGGTAAATGTTGTTTATCTAGTTATCTATATAAAATAACAATAATTT TAATAAAAAAAAGTTCGCCCAATGTACGAGACTTTCACCTAGTGGAGTTTAGGGAGGGTAGATATCCCTCCAAGTGAAGAGGCTATTTTAGGATTTAAAC TCATAACTTCATGGCCACTAGGCAACAAGCTTACCATTGTGCCAAACTCACCCTCTAAGGAAGTGATAAATTGTCAGTAAGCAAGTGATACTTATGCACT CTCTATGGTATCTTACAGAATATCTCTTTACTCTCCCCTTACCTAAAACCCTCCAATCCAGCATGGTGTATATTAGAATAGTTGGGTCTAACATCACCCT AAAATCTAACTCATAGGGAGATGATCATTCATGTCATTATAAATGAGTTATAACTCATATTCTCAACTGATTTGGGACACTTCTACAATTAACACCCCAT CTCACCCATGAATGAACATTTGGATAGTGTCGCTGTAGGAATGAATATGTGTGGGTGTCCCAACATTGTACTAGACTCTGAGTACTACATTAGAATAGTT GGGCCTAACTCCCACCCTACAGCTAGCTCATAGGGTGGGGATTTCTGAAGTCACTATATATGGTTCTTGGCTCATATTCTCAAGTCTGAACTGATCAACT GATGTGAGACTTTTAATAGTTAACACTTTCTCTTTTGCTGAACCAGATAAGCATTTGCTGTAATATTGTACTTTTTAGTGGAAAGGTTTAGCGAAGGGTT TTGCATGTCAAGGTTTACAAGTTTTCTTTTAATTCTTGGAAGTGTATAGATTACTAAGTTCATATTGATGCGCAGATTAGTTTTGATTAGCCATTGAACT ATAAGCACGTCTAAGACATCAGTTGTCTGAAGCAAACTTCTTATTATTAACTGATATATGACATTTGCATATAAACTTGACAGTGAGTGTATATTCTTAA ACTTAGATATGTGACACAACTTGAATGATTGTATCAAGTGTTTGCTGCATCTTCATCTATAAGCTTCTCCTCACTGCTCAGGTTTGGATTGAACCTGAAA TCACATATTTCACAACTTCAATTGAATAACAACAACCATACCTTAACCCCACTAGGTGAGTCGGCTACATAGGTCAAACGATGCAATAATGCTCTCATAA ATCATATCTATTGACAAAATATTGATATCTAAATCATTTCACCAATTGTGTTTCTTAGTATCCCTTTGCCTATAAAAACTGCACTAACCTTCTTTTGATC TACTCTCCTTACGGGGGTTTCTAACGGTTTCCTCCACACAAATTACTTGATTTTGACATTTCTTTGATCATTTTGGTTAAGTACCTGTGAACTATAAGTG CACTGAATGATTTTTAAGTAGACTCATCCCCGAAGTTATCAACTATACTGGTTAGATTGAAGATCTTACTCATAAGTCCAACTGTCTTGAGGCTGAACTT GAGAGGACTTCAAAGCAATTGAAGCAAGTGACTGCAGTAGCTGCTGATGAAGCTGACAAGTGTATATCTGCCAAAGAGCTTATAAAAATGTTGACTGCTC AGTTGAAGGAAATGGTGCAAGTTCAAAGGCTGCTTGAAGGACATAATGCTGACTCCATTGCAGACTTATATTCTAAAACCACTGTTAATACTCTAAATCA GTCGGTAGAGAAGAGCCATATGACAAATACTATCACTCCTTCAAATGGATCAAACAGCAATGCAGCAAATCGAATATTGCCTAATGGCAATAAAACGCAA AGTGGAAAGACGGAATGGGTGGTGCAAGATGAACCAGGCGTATACATAACTTTGTCTTCCTTATCAGGTGATGGTATTGAACTTAAGAGTGTCCGTTTCA GGTATTTATGTTTTCCTATCCCTTAATTGTTGAAATATGTTCAATTTTATGTAAATCACATATTGTCCCAAGTAGAGTTTTTTTCAGAGTAATTGTCCCT GGTCAATATTAAATCTAAGGAATTCTTTTTGCTTCCGGATGCATCATCTCAAAATAAATATTCCTTAACATATAGTTCTACATATCTCCAAATAAATGTC ATGACAGACTCAATTTATATTCATTTGCATCCCTCGTGTGTCAATTTGACCCAGTTTTTTGCAAATGCCACATTCCATTGAGATATTCCCCATATGTCTG GTACATGTTTAGTGAAGATTACTTGATAACCCATCCAAAAAGGTAGTACTGAGTACTCTCACACGATTTGTACCTAAATAGGCACTTTCGCTATGGTTGG GTCAGGTGTGATGTTGATGTCGGAAGCTTGACCTTCCACTAGGCCAACAATGCTACTCTCACGTACCCGCTTGCGCCT BLAST
Tissueflowers
Gene nameLI_gene_35096; 
Additional informationdetails; 

Expression of Ll_transcript_182174

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_182174

BlastpPH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 50.3% of identity
BlastxPH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 49.5% of identity
Eggnogregulator of chromosome condensation(COG5184)
KeggLink to kegg annotations (AT1G76950)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019454818.1)
PfamRegulator of chromosome condensation (RCC1) repeat (PF00415.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;