| Id Trinity | FTRINITY_DN53594_c1_g3_i4 |
|---|---|
| Name Transcript | Ll_transcript_182175 |
| Sequence | GGGATCTTTACACTTGGGGTGATGGTACTCACAATTCTGGTTTGCTTGGGAATGGAAATGAAGTCAGTCACTGGATCCCGAAGAAAGTAAGTGGTGATAT GGAGGGTGTACAGATATCATTTGTTTCCTGTGGACCTTGGCATACAGCTATTGTTACATCAGCTGGCAAGTTGTTTACATTTGGGGATGGATCTTTTGGT GCCTTGGGTCATGGAGATCATAGTAGCACAACTATTCCTCGTGAAGTAGAAACTTTGAAAGGATTGAGAACAACCTGGGTTTCTTGTGGTGTTTGGCACA CTGCTTCTGTTGTTCAGGTGAATGAATCTATGGAATCTTCAATGCAATCACTCTGTGGAAAACTATTCGCCTGGGGTGATGGGGATGAAGGGCGACTTGG ACATGTTGATAAGAAACCCAGACTAGTTCCTGATTGTGTAACGACATTGAATAATGAAAATATTTGTCGAGTGGCTTGTGGCCAAAATCTTACAATTGCA TTGACAACCTCAGGACATGTATACACAATGGGTAGTGCTGCTTATGGACAACTTGGATGTCCTGCATCTGATGGGAAAGTCCCTGGACGTGTTGAAGGTG AGCTTGCTGACAGTTTTGTAGATGATATTGCATGCGGCTCTTACCATGTTGCAGTCCTGACTTCTAAGGCAGAGGTTTACACTTGGGGAAAGGGTTTGAA TGGTCAGTTAGGCCATGGAGACATCGATCACCGGGATAAACCTACACTTGTTCCTTTTTTAAAAGATAAGCAAGTGAAGAGTGTTGCTTGTGGTTCAAAT TTCACTGCTGTTATATGCCTTCACAAATGGATATCAAGTGCTGATCATTCTGTATGTTCTGCTTGTCGTAACCCATTTGGATTCATAAGAAAACGTCGTA ATTGTTACAACTGTGGACTAGTGTTTTGCATAGGATGCAGTAGCAGGAAATCTACGAAAGCTTCACTTGCTCCAGATGCCAACAAGCCATACCGGGTCTG TGATGACTGTTATTCTAAACTAAAGAAAGCTGAAGAATCTATATCCTTAGTTCAAACTCCTACCTCCAGAATTGTGAGTGCAAATGACACTAGGGCTACT AAATTACAGGCATCGCTATCAACGCTTGCGCCTGTTGGTTCTATTGTTCGAGGAGCAAGCAAATACAAAAATCTTCCAGAATTGCATGATAACCATGTTT TTTCAGCTCTGAGTGGAAAACTACGGCTGGGGACTCCTCCTATAAAAGCATCAAATTCCCATTTTAGAACACCAAGGAAGCGCCATTCAATTTCTGTGCT TCCTTATAGAGGGGCTTCTCAATCATCTTCTATTTCACCAAAGTCAAGCACACAACAGTCTTGTACAGATATCCATGATAATTCAAAGCACATGAATGAT ATTCTAAGTCAAGAAGTTATATGTTTAAGGGCACAGGTAAATCTTCTGAAATACCTTTTCCAACCACACATCCTTCTGTAAACCTTTGCTATAAATTCTT ATGAAACAATAAATCCTTAGGTGTGATATGGTATTTTATTGACATGTCTTCTAGTAATAAAAACACAGTGGAACTTCAGATTCTCTTTGTTGTGGGTTAC CCTTTATTATTTTTATTACCCTCAAATAAACTAAAAGCAGTTAGGAAGAAAACAGGTAAATGTTGTTTATCTAGTTATCTATATAAAATAACAATAATTT TAATAAAAAAAAGTTCGCCCAATGTACGAGACTTTCACCTAGTGGAGTTTAGGGAGGGTAGATATCCCTCCAAGTGAAGAGGCTATTTTAGGATTTAAAC TCATAACTTCATGGCCACTAGGCAACAAGCTTACCATTGTGCCAAACTCACCCTCTAAGGAAGTGATAAATTGTCAGTAAGCAAGTGATACTTATGCACT CTCTATGGTATCTTACAGAATATCTCTTTACTCTCCCCTTACCTAAAACCCTCCAATCCAGCATGGTGTATATTAGAATAGTTGGGTCTAACATCACCCT AAAATCTAACTCATAGGGAGATGATCATTCATGTCATTATAAATGAGTTATAACTCATATTCTCAACTGATTTGGGACACTTCTACAATTAACACCCCAT CTCACCCATGAATGAACATTTGGATAGTGTCGCTGTAGGAATGAATATGTGTGGGTGTCCCAACATTGTACTAGACTCTGAGTACTACATTAGAATAGTT GGGCCTAACTCCCACCCTACAGCTAGCTCATAGGGTGGGGATTTCTGAAGTCACTATATATGGTTCTTGGCTCATATTCTCAAGTCTGAACTGATCAACT GATGTGAGACTTTTAATAGTTAACACTTTCTCTTTTGCTGAACCAGATAAGCATTTGCTGTAATATTGTACTTTTTAGTGGAAAGGTTTAGCGAAGGGTT TTGCATGTCAAGGTTTACAAGTTTTCTTTTAATTCTTGGAAGTGTATAGATTACTAAGTTCATATTGATGCGCAGATTAGTTTTGATTAGCCATTGAACT ATAAGCACGTCTAAGACATCAGTTGTCTGAAGCAAACTTCTTATTATTAACTGATATATGACATTTGCATATAAACTTGACAGTGAGTGTATATTCTTAA ACTTAGATATGTGACACAACTTGAATGATTGTATCAAGTGTTTGCTGCATCTTCATCTATAAGCTTCTCCTCACTGCTCAGGTTTGGATTGAACCTGAAA TCACATATTTCACAACTTCAATTGAATAACAACAACCATACCTTAACCCCACTAGGTGAGTCGGCTACATAGGTCAAACGATGCAATAATGCTCTCATAA ATCATATCTATTGACAAAATATTGATATCTAAATCATTTCACCAATTGTGTTTCTTAGTATCCCTTTGCCTATAAAAACTGCACTAACCTTCTTTTGATC TACTCTCCTTACGGGGGTTTCTAACGGTTTCCTCCACACAAATTACTTGATTTTGACATTTCTTTGATCATTTTGGTTAAGTACCTGTGAACTATAAGTG CACTGAATGATTTTTAAGTAGACTCATCCCCGAAGTTATCAACTATACTGGTTAGATTGAAGATCTTACTCATAAGTCCAACTGTCTTGAGGCTGAACTT GAGAGGACTTCAAAGCAATTGAAGCAAGTGACTGCAGTAGCTGCTGATGAAGCTGACAAGTGTATATCTGCCAAAGAGCTTATAAAAATGTTGACTGCTC AGTTGAAGGAAATGGTGCAAGTTCAAAGGCTGCTTGAAGGACATAATGCTGACTCCATTGCAGACTTATATTCTAAAACCACTGTTAATACTCTAAATCA GTCGGTAGAGAAGAGCCATATGACAAATACTATCACTCCTTCAAATGGATCAAACAGCAATGCAGCAAATCGAATATTGCCTAATGGCAATAAAACGCAA AGTGGAAAGACGGAATGGGTGGTGCAAGATGAACCAGGCGTATACATAACTTTGTCTTCCTTATCAGGTGATGGTATTGAACTTAAGAGTGTCCGTTTCA GTAAGAGACATTTCACTGAAGAACAAGCTGAAAAGTGGTGGGCTGAAAATGGAACAAAAGTATTGGAGAGGCACAATGTAGTTTCTTTATTAAACTTAAA GCAACCGTCACAAACAATTTCCATGACCCTCTGAACTGAAAATTCCTTTTCCTTCTCCCTCTTCTGTCTCTAAACAGTCGTGGATCCATTAGTCGAAAAC TGACAGTACAATGAGAAATTAGATGAACACAGAAATAGTCTTCTTATTTCAAGGAAAGTGGCAATTGACACAAATGAGTGAATTTCTATTTGATTCACTT ATTTTTCACCCATTGTGATTGTTTGCCAATGTGCACATTAATGTTTTATGTGACAATTCTTGCTTCCATTCAGACCATTGCATGGTACTGCACTCCAGTT CAAAAAAGAAAAATGTCTGTATCAGTTTCATAGGATGTAAATGTAACAGTCTCTTTCTTTTAGTTTTTCTCATGTATAAATTCAAAGTGAATGAAATTTT TGTCAAACTATTAGTTAGTAAAACAATGATTCATTGTTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_35096; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_182175
| Blastp | PH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 50.3% of identity |
|---|---|
| Blastx | PH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 49.5% of identity |
| Eggnog | regulator of chromosome condensation(COG5184) |
| Kegg | Link to kegg annotations (AT1G76950) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454818.1) |
| Pfam | Regulator of chromosome condensation (RCC1) repeat (PF00415.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |