Ll_transcript_182180

• Id Trinity: FTRINITY_DN53594_c1_g3_i5
• Name Transcript: Ll_transcript_182180
• Sequence: GGGATCTTTACACTTGGGGTGATGGTACTCACAATTCTGGTTTGCTTGGGAATGGAAATGAAGTCAGTCACTGGATCCCGAAGAAAGTAAGTGGTGATAT GGAGGGTGTACAGATATCATTTGTTTCCTGTGGACCTTGGCATACAGCTATTGTTACATCAGCTGGCAAGTTGTTTACATTTGGGGATGGATCTTTTGGT GCCTTGGGTCATGGAGATCATAGTAGCACAACTATTCCTCGTGAAGTAGAAACTTTGAAAGGATTGAGAACAACCTGGGTTTCTTGTGGTGTTTGGCACA CTGCTTCTGTTGTTCAGGTGAATGAATCTATGGAATCTTCAATGCAATCACTCTGTGGAAAACTATTCGCCTGGGGTGATGGGGATGAAGGGCGACTTGG ACATGTTGATAAGAAACCCAGACTAGTTCCTGATTGTGTAACGACATTGAATAATGAAAATATTTGTCGAGTGGCTTGTGGCCAAAATCTTACAATTGCA TTGACAACCTCAGGACATGTATACACAATGGGTAGTGCTGCTTATGGACAACTTGGATGTCCTGCATCTGATGGGAAAGTCCCTGGACGTGTTGAAGGTG AGCTTGCTGACAGTTTTGTAGATGATATTGCATGCGGCTCTTACCATGTTGCAGTCCTGACTTCTAAGGCAGAGGTTTACACTTGGGGAAAGGGTTTGAA TGGTCAGTTAGGCCATGGAGACATCGATCACCGGGATAAACCTACACTTGTTCCTTTTTTAAAAGATAAGCAAGTGAAGAGTGTTGCTTGTGGTTCAAAT TTCACTGCTGTTATATGCCTTCACAAATGGATATCAAGTGCTGATCATTCTGTATGTTCTGCTTGTCGTAACCCATTTGGATTCATAAGAAAACGTCGTA ATTGTTACAACTGTGGACTAGTGTTTTGCATAGGATGCAGTAGCAGGAAATCTACGAAAGCTTCACTTGCTCCAGATGCCAACAAGCCATACCGGGTCTG TGATGACTGTTATTCTAAACTAAAGAAAGCTGAAGAATCTATATCCTTAGTTCAAACTCCTACCTCCAGAATTGTGAGTGCAAATGACACTAGGGCTACT AAATTACAGGCATCGCTATCAACGCTTGCGCCTGTTGGTTCTATTGTTCGAGGAGCAAGCAAATACAAAAATCTTCCAGAATTGCATGATAACCATGTTT TTTCAGCTCTGAGTGGAAAACTACGGCTGGGGACTCCTCCTATAAAAGCATCAAATTCCCATTTTAGAACACCAAGGAAGCGCCATTCAATTTCTGTGCT TCCTTATAGAGGGGCTTCTCAATCATCTTCTATTTCACCAAAGTCAAGCACACAACAGTCTTGTACAGATATCCATGATAATTCAAAGCACATGAATGAT ATTCTAAGTCAAGAAGTTATATGTTTAAGGGCACAGATTGAAGATCTTACTCATAAGTCCAACTGTCTTGAGGCTGAACTTGAGAGGACTTCAAAGCAAT TGAAGCAAGTGACTGCAGTAGCTGCTGATGAAGCTGACAAGTGTATATCTGCCAAAGAGCTTATAAAAATGTTGACTGCTCAGTTGAAGGAAATGGTGCA AGTTCAAAGGCTGCTTGAAGGACATAATGCTGACTCCATTGCAGACTTATATTCTAAAACCACTGTTAATACTCTAAATCAGTCGGTAGAGAAGAGCCAT ATGACAAATACTATCACTCCTTCAAATGGATCAAACAGCAATGCAGCAAATCGAATATTGCCTAATGGCAATAAAACGCAAAGTGGAAAGACGGAATGGG TGGTGCAAGATGAACCAGGCGTATACATAACTTTGTCTTCCTTATCAGGTGATGGTATTGAACTTAAGAGTGTCCGTTTCAGTAAGAGACATTTCACTGA AGAACAAGCTGAAAAGTGGTGGGCTGAAAATGGAACAAAAGTATTGGAGAGGCACAATGTAGTTTCTTTATTAAACTTAAAGCAACCGTCACAAACAATT TCCATGACCCTCTGAACTGAAAATTCCTTTTCCTTCTCCCTCTTCTGTCTCTAAACAGTCGTGGATCCATTAGTCGAAAACTGACAGTACAATGAGAAAT TAGATGAACACAGAAATAGTCTTCTTATTTCAAGGAAAGTGGCAATTGACACAAATGAGTGAATTTCTATTTGATTCACTTATTTTTCACCCATTGTGAT TGTTTGCCAATGTGCACATTAATGTTTTATGTGACAATTCTTGCTTCCATTCAGACCATTGCATGGTACTGCACTCCAGTTCAAAAAAGAAAAATGTCTG TATCAGTTTCATAGGATGTAAATGTAACAGTCTCTTTCTTTTAGTTTTTCTCATGTATAAATTCAAAGTGAATGAAATTTTTGTCAAACTATTAGTTAGT AAAACAATGATTCATTGTTG
• Tissue: flowers
• Gene name: LI_gene_35096;
• Additional information: details;

Expression of Ll_transcript_182180

FPKM

• FPAB: 0.1
• FPNAB: 0.2
• LF1: 3.8
• LF2: 1.7
• LF3: 0.6
• LF4: 0.1
• UF1: 2.4
• UF2: 1.8
• UF3: 0.5
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_182180

• Blastp: PH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 44.52% of identity
• Blastx: PH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 43.96% of identity
• Eggnog: regulator of chromosome condensation(COG5184)
• Kegg: Link to kegg annotations (AT1G76950)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454817.1)
• Pfam: Regulator of chromosome condensation (RCC1) repeat (PF00415.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;