| Id Trinity | FTRINITY_DN53715_c2_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_122554 |
| Sequence | AAGAATGTGGGTAACCCTCTTAGTTTTAGGATGTAAAAATTGTTGGGTCTTTTCTAAGAAAAGGTTTTTCTATGTCATTTTAATTTTTCCACTTTCATTT GCAATGCAAGTAATATTTCATGTTTACACATGATTTCTTTTGCTGTTTTCCCCTTTAGTTATCTGGATATAAATCGCGGGGATTGTAAAAAACCGGTCCT TGTTTTAAGTTATTCATCTCCAGTGCAAGTAGTAGTTCATGTTTTTGCTTCATCTTTAGTCATATTTTTCCCTGGCTTTTCATGTTGTGGATTTCTGATA GTTGTTAAGTTTTTAATGTCTGGACTCTGGGTTGCTGGTACTCTTCTATTTCTATTATTGTTGAAATATCTCTCTTCTTTTTCAGGGGACATTCATGGAC AATACAGTGATTTGTTAAGGCTATTTGAGTATGGGGGTTTACCTCCTAATGCTAATTATCTCTTTTTAGGAGACTATGTGGATCGTGGGAAGCAGAGTTT AGAAACCATATGTCTTTTGCTTTCCTATAAAATCAAATATCCAGAAAACTTTTTCCTTTTGAGGGGAAATCATGAGTGTGCTTCCATTAACAGAATATAT GGATTTTACGATGAATGTAAACGAAGGTTTAACGTGAGGCTTTGGAAAGCCTTTACAGACTGTTTTAACTGCCTTCCTGTGGCAGCCCTCATAGATGATA AAATATTGTGCATGCATGGTGGTCTTTCTCCTGAACTCACACACTTGGATGAAATCAGGAATCTGCCCCGCCCGATTGCTATCCCGGACACTGGTTTGCT TTGTGATTTGCTTTGGTCGGATCCTGGTAGAGATGTGAAGGGTTGGGGTATGAATGACAGAGGAGTCTCCTTCACCTTTGGCCCTGATAAGGTGGCTGAA TTTTTGGCAAAGCATGACTTGGATCTTGTCTGTCGTGCTCATCAGGTTGTAGAGGATGGATATGAGTTCTTTGCCGATCGGCAACTTGTTACGATATTTT CAGCTCCAAACTACTGTGGTGAATTTGACAATGCTGGTGCAATGATGAGCGTGGATGAAAACTTGATGTGCTCTTTCCAGATTCTCAAGCCTGCAGAGAA AAAAGCAAAGTTTGTGATGTCAAACAAAATGTGATGGTTGGAAGATCATCACTTTCCCTTCAACTATGGTCTGTTAATTATTTATTTTGGTTTTCATGGT ATTATAAGTACATTGGTTGAACTTATATCCCGAAACATGCAGTATTGTTAATGTCAGATTTCTGGTTTTTGTATTGGTACAGTTCAGCTTTTCTTTTGCG AAGTAGAGTGCATATATCTTCTCTTAAAGAAGTTATCTGTTGCTTTTCGAAATGAAAAGGGGATGTTTTGCTCATTTTTATGATGGGATTGCATTGATTA CTTATAACGATTGTACATGTAATATACCATATCTTTCTAACGGAGTGTTGAATGATCATGAAATTATAGGTAAGATTTGCATAATTATATTATGTGGTCT AATTGGCATTTCTGAATTTGGTTTTATCAACTAATATATATCATTCATAACAGAAAGTCCTGCTACTGTTATTCCTTCATTGATGGTATCATAGTTTTTT GGCTCAAAAGATTTAGGAGCAGATTTCTGTTATGAAAATCCGGTTAGATGACTCAATTATTTGCGTGTAGAAATATATATATTATTTGATGAGAGAGTTT CACATGGACAATTTACGGTAAGAACTAAGAGTACTGTGTTTTTAAGTTTCAAACCAGCCAAATCACTCTTGACTGAATTAACATTCAAGACCGAAGTAGA ATCGAAGGAAAATGCATATAAAAGTCCTTGAAATCACGAGTCAATGTTCATCATTCTCAATCACTAAACAGTGTATTGCATTTGCATAAGGTTGTGGTTA GATTTAGTTTAAACGCCTAGAAAAAAAGATTTAGTTTTAGCCTTAAATAGTAATCCCTTTCACTGCATCATAGCTACGTGCATTGAAGTTTTTTTGTAGA TCCATTTTCTGTGTCTAGTCTGCCATACTATGAGTTATATACATTGGTTAGAATAATACATAAATGTTTTTCTTGGTAATTTTTTCCTTCTGATAAAAAA TCGCATATTAAAGATTGCCTTGGAATCAATGGAATGTATGATTATTCATAATGGAAAACTGGACATTGTCAACCAAATTTTATTTTAGCTAACTAAACAA ACTCTTAGTGGTTGTTGCGATTCAATATTCCAATGTTTTCTTTACTCCATAAAACTTTCTTAGAAGCATTACATGCAAATATAACATCACCTGTTGAATT CCGCAACTAATCAAACCTAGTTATATTTGAGGCTGCTTTGTTCTGTGTTTTTTTCTTCATGATATGCCTCATTAATTTCAGTTTCATTGGTTTGTGTAAG TAATAGTTTTAGTTTTTTCTTCTTCAAAATTCTGTATTCTGGAAAATAACTGGATCAAAACAAATATGTTTATTATGCATTTTTTTGTACCTAAAATCTT TAAGTGTTTAAGGTATTGGTTTTCTTTCTTAATATTACCTGGTCTCGCACAGCAGGGAATCCCTTATTTAGCAGTATTCTTGAATGATACAAAACTGATT TAATTGTTTTTTGTTTGTTTGTGTATTCATATTATACCATCCATGTGCTTAATCTGTGGTTTCATCAGCTGCTGCATCATAGTTGTTGACCTTCATCATC TCTTTCTACGTTTTCTCTGGTGCAGGCATGTTCACTGATTTGTCGGATTAAATTAAAATCAGAAGACGATCTAGGTTGTCCGGTCTTTAGTTCTATCGAT TCTGCGGTCACCACGAGCAAGTTTAATTAATGCCTTGTCCGTCCCGTCAGTTCAGACTGCAAGCATAATGTACTATTTATAGGATATTAAGCATTGCTGT GGATGGCCGTAAAGTGAAGGTTTTTATCTCTTTTTTCTTCTTTAGTTTTCACAATTATTCTGCAGCACAATATGTACATATATGTGTTACAGAAAGCTCT TCATTGTATTAAACTATCAACTACATTCATGGTTCAATTAAGCAGTATGTATTGATGATTATTCTATCCAATTTTATTGAGATAGTAAAAGATGGCATTG ATGGATTTTATGGTTTTGTATTGGCTTGTTTTTTGTAATGTTAGATTAAGATCTTATGGTATTAAGAATGCAGAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_36187; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_122554
| Blastp | Serine/threonine-protein phosphatase PP1 isozyme 4 from Arabidopsis with 89.62% of identity |
|---|---|
| Blastx | Serine/threonine-protein phosphatase PP1 isozyme 4 from Arabidopsis with 92.37% of identity |
| Eggnog | serine threonine-protein phosphatase(COG0639) |
| Kegg | Link to kegg annotations (AT2G39840) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460612.1) |
| Pfam | Calcineurin-like phosphoesterase (PF00149.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |