Id Trinity | FTRINITY_DN53893_c4_g1_i13 |
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Name Transcript | Ll_transcript_23219 |
Sequence | ATGATGGTTCAGATCCAGTGATCTCGGATGGGGATGGCTATCGTGCTGTTCCGTTTAAATATGCAAATCCTAATGACCCGGCTGAGACAAGAGACAGTGA TACGGAGTCTGCATATCGTCCTCCCTTCCCTGTACCAGAAAGATTACTCCATAGTCTGTGTGATTAGGTGATAATTGTCTAGGGTGCATATGTTATTCTA AGGCTTACAATGTCTAAGTTTCAGATGCTTGGAGCATAAATGGAGTTCTTGTGACTCAAGGTAGCCATTCTCAGGCACCTTGTTTCCTTTTGATGTCATG AGAAGGGTCTGTGCAGGTTGGATTAGGATGATAGAAATTGGTTGATTCTTTACCTCGAGAGCAAATGGGATGAAATTTATCTTCTTAAAGTCCTGTTTCT TGATCTTTATGGTTATGCAAGTATATTTGAGGTTATCTTATGTTTGTTTAGTGAGATATTTATGTATTTCTGCCTGCGAAGACCTTTTAAAAGTTATATT TATGCTAATTTTTTGAAATTCACACTTATTGATGAAGAAACCTTTTTTGTTTGTATTTTCAGCCTCCAAACGAGAAGGTACATCAGATTATCTCAAGGAC TGCAATTTTTGTCAGCAAACATGGAAGCCAGTCAGAAATTGTCCTGAGGGTGAAACAAGGAAACAATCCAACATTTGGGTTCCTGATGCCTGATCATCAT CTTCATGCATATTTTAGGTTTCTTGTTGATCATCAAGAACTTTTGAAAGGTGACAAAGATGATACCATCGGCAACCCATCTGTTGACAAGAATAAAAGTC AGGGGCTTGACCAAACAGGTGGTGCATTGTCTTTGCTTGGATCAGTTTATGGATCTGGAGAGGATGAGGATGGTACAACCGATAATACTCATGACTTCAA GAGAAACGAATGTGAAGGAGCTGTTGATGCTGTTAGTGCTCATGATTCTGCAGGAGTAGAACCCGCAGAGTCATCTCCAGATGCAGCCAAGAAGGATGGA AGCATTTCTAGAAGTCCGATATCTTCGAAAGAAAATGTTCCTGTCATTAAGCGGAACCAGCCTATCAGTACTGTCAAGGCAGCAATCGCAGCTAGGGCAA AAACAACTGATGCATTGGATTTAGTGTCTAATGTGGTAGACAAATCACAGGTTTCTGTGCCCAATAAAGTTAAGATTGAACTACCCGTTGTGGAGCCCCC ATCTAGCATAAAGGAAGTTATTGAGAAGGTGGTTGAGTTCATTTCAAAAAATGGAAAACAATTTGAGGCTGTTCTTGCTGAACAGGATCGTGCTAATGGA AGGTTCCCATTTCTTGTGCCGTCTAATCGATATCATACCTATTATCTGAAAGTTCTTCAAACTTCTGAAGATTCTAAGTTACCAGGCAAGGGCTTGCAAA GGCACAATTCAGCAGGTCGTTCAGGGGACAATAATTCTATTGCACACGAAGAAAGTGATAATTCTTCATTTGGATCTGTGAGCTCTGATATACCACATGA TATGGACCGCAAAGAGAAGTTTAAGTCGATTGTCAGAAAGTCGAAGAAGGATGGTCAAGATGCAACTCCCGAAGACATCCAAACTCAGACCATGGTGTGC ATGGATGCAGCAGCAGCTGCTGCTATTCTTCAGGCTGCCACTAGGGGTATTAAAAACCCTAATTTAGAAATATTTAGCAAGACATCAAGTGGTAGCAGTC AAGGCCTTGGAAGTTATGTCAAAAGCCCAAATCTGAATGCAGAGGATAGTGCTTCTGTCCCTGTTGGCAAGGCTATTCGAGAAAAGGTCAATATTGCTGT AGCAGGTGAGGCAGACTCCTCTGAAGCAAATATGACTAAAGAGAAGATTAAGGCAGAGAGACTGAAACGAGCGAAGATGTTTGCAGCCATGATAAAAAGC AGAGCTGAGCCACTCAAGAGTGAAGTCCCACGTGGTTTATCAGTTGAGCCACCAGGCTATGGACTTTCAAGTTCAGATGCTGAGACTGGGAATCTTATGG GTGAAGAAAGAAAAGGAAGTTCTGTTCCACTAGATGTTGATAATTCAGATAAAAGTCAGAAGTCTGAGGAGAAACTTTCTGTTGATAAATCAAACGAAAG TCACAAATCTAAGGAGAAACTTGCTGTTGATAACGATGAACGGCGGTCGAAAAGAAAGTACCGTTCAAGATCCAGTAGACATGAGGAGGAGGAGGAGGAG GAGGA BLAST |
Tissue | flowers |
Gene name | LI_gene_37752; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_23219
Blastp | Pre-mRNA-splicing factor sap114 from Schizosaccharomyces with 35.38% of identity |
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Blastx | Splicing factor, suppressor of white-apricot homolog from Homo with 39.02% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (SPAC22A12.09c) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456009.1) |
Pfam | Surp module (PF01805.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |