| Id Trinity | FTRINITY_DN53962_c3_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_91585 |
| Sequence | AATTCAATAGTGTAGATCTATTCATTAATTCAAACAATTAGATTTCCAAGAAATTGATGGCTAAGATGAAAGATTTACTCTTCGAGTAACTTGATCCTCC AATTAAAATAAAGTGTTATTTTTTATTTATTGGCAAACATTGATTGGTCCATTACATGGGATAGGAAATATCAACGGATACACTATCTCCTTCTATAAAT AGGTAGCATTCACAAATGTATGAGAAGGAGGAGAATATAATAAATGAGCTTTATTCCATGTTTGGTGTATAAGGGTTAAAAAGTGAGGCAAATTGGCTTA GAGGTGCAACCAAAACAACATAACATGATACGAGCTCCTCTCTAGTAATGGAATATCCAATGCGGGAAGATGAGAGGAATTTTTTATTATTAAAAAAATA ACTTGATAGTCAGATGTCAATCTTTACTTTATATGCATTGGTAATTTTCAAGGCCATTGACAAATCTAGTGGATCTTGCCAATTTTACTTAGGAATTTCA CATTAAACCAAGAGAACAAAATTGTTTTTTCTTTCTTTCTCTATTTCAAGTAATAGGACTGCATGAGTAGTGGAATATGTTATGTAGTTGCATGAACTTA TGATTTACTGATTTTTGAGCAATTTGAAGTTTTCCAGGACAACCACATAGCAGGCAACAAACTTATGTTCCTCATAATGGGAACATGGAAAGGGTTTTCA ATCCAAGGCTAAGAGAGATTTTCCAGCACTCACCTCCAAGATTCACATTCCAAACAAGCACACAAGTTGTTCCTCCAGTGATTGAAAATTCCAAATCAAC AGTTTTGAGCAAGCTTAAGAAAGAAGTCTATAACCCCACCCCAAAGTTGTTAGCAAGGAATTTGAGCTCATATTATAGAGATAAATACAATAGAGTAAAT GGTTTGACAGAGAGGAGGAAAGAGAAGGATGAAGATGGGAAGAGGTGTGCTATTTGTTTAGAAGATTTTGAGCCTAAAGAGGAAGTAATGACCACTCCAT GCAAACACATGTTTCATGAGGATTGCATAGTGCCTTGGTTAATAAGCCATAGTCAATGCCCAGTTTGTAGGTTTGTTATTAGTGAGAGAGTGAGAGGGAA CCCTTCATCCTTCAACAACAATGATAACACCAATTTGGAACCCAGTGACCAGATTGATGGAGAGCTTTTGTCAATTTTGAGGGCCATGGAAGAAGCTTTT CACTTTACCAGTCACTAATATATACGTAAGAATTTACCATAGTTGTGAGGAAGATTTGTAAGTTCAGATATTACTATGTGCATGGTGGTTAAGCTTATAT AATGAGTATGGTAATGGTAATAAAAGTTCTGCATGCATGCACCTAATGACTCCCTTTTTGTAATTTCCCACTTGATCCATAAAGCTTTATATTAAAATGC ACCCATTTTTTTTAAAATTAGAAAAGTGTTGATTAATCAATTACATCTATTTATTAGAAATATGAGTCAAACAAAATCATGTATGCCATACACTCTGTTC TCACTTCTAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_38456; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_91585
| Blastp | E3 ubiquitin-protein ligase RING1 from Gossypium with 41.67% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase RING1-like from Arabidopsis with 31.3% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449977.1) |
| Pfam | Ring finger domain (PF13639.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |