| Id Trinity | FTRINITY_DN53967_c7_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_88816 |
| Sequence | GAAAATGCAAGCTTCAGCCTCCAAAAGACTATTCAGTCTTATTCTTTTAGATCAGTAGAGAGCTACTTCAACCTCGTCTAACCGTAAAGCCTCCGATATC ATCGTCGCGAACAATGAACGGCGCCGGAAACCGTAGATGGGAGCGCAGAGACAATAACAACAACAACGGAGGATCCAATAAGCAGAAGCTGATTCGTAGC GCTGAGGAAGAACTCGAATCCAAATTAGGGTTCGATATTTTCTCCGAGGGCGATAAACGACTTGGATGGTTGCTCAATTTTGCAACGTCATCGAGTGAAG ATGAAGACACACACAAAGTCTACAGTTGTGTTGATCTATACTTTGTTACACAGGATGGGTCTTCATTCAAGACAAAATACAGATTTCGTCCTTATTTCTA TGCAGCTACGAAGGATAAAATGGAGATGGATGTTGAAGCATACCTGAGGCGACGTTATGAAAGTCAGATTGCAGATATTGAAATAATAGAGAAAGAGGAC TTGGATCTTAAAAACCATTTGTCTGGATTAAAAAAATATTATTTAAAGATATCATTTGATACCGTGCAACAATTGATGAATGTGAAGAGGGACCTCATGC ACGTAGTTGAAAGAAATCAGGCAAAGTCTGATGCTGCAGATGCCTATGAGTCTATATTAACTGGGAGAAGAGAACAAAAACCTCAAGATTTTCTTGATTG CATAATCGATCTCCGTGAATATGATGTTCCTTATCATGTTCGCTTTGCCATTGACAATGATATACGGAGTGGCCAGTGGTATGATGTTGGAGTGTCCAAT ACTGGGGTTACACTTGAGAAGAGGACAGATCTTCTGCAGCGTGCCGAAGTTCGTGTCTGTGCATTTGATATTGAGACCACAAAACTTCCATTAAAATTTC CTGATGCTGACTATGATATAATTATGATGATTTCATACATGGTAGATGGACAAGGGTACTTGATCATAAACCGAGAGCGTGTTGGGGCAGATATAGAAGA TATAGAGTACACTCCAAAGCCAGAGTTTGAAGGGTGTTTTAAGGTTACAAATGTCCAAAACGAGGTTCAGCTTCTCAGATTATGGTTCTCTCATATGCAA GAGGTGAAACCTGGTATCTATGTGACTTATAATGGTGATTTCTTTGATTGGCCATTCTTGGAACGAAGGGCAGCCAGCCACGGGTTCAAAATGAGTGACG AATTGGGGTTTCAATGTGATACAAATCAAGGAGAATGTCGTGCCAAGTTTGCTTGCCATTTAGATTGTTTTGCTTGGGTTAAACGTGATAGTTATCTTCC ACAGGGGAGCCAAGGCCTAAAGGCTGTCACAAAAGCAAAGTTGGGTTATGATCCGTTGGAGGTAAACCCCGAGGACATGGTTCGCTTTGCAAAGGAAAAG CCTCAGATGATGGCTTCCTACTCTGTTTCTGATGCAGTGGCAACTTATTACTTATATACAACTTATGTTCATCCCTTTATTTTCTCTCTTGCCACTATTA TACCCATGTCACCAGATGAGGTTTTGCGCAAAGGCAGTGGGACCCTCTGTGAAATGTTGCTCATGGTCCAGGCATACAAGGCCAATGTTATATGTCCTAA CAAACACCAATCTGATCCAGAGAAGTTTTATAACAACCATCTTCTTGAGAGTGAGACATACATAGGTGGCCATGTTGAATGCCTAGAAACTGGTGTGTTT AGATCTGATATTCCATCTAGTTTTACACTCGAGCCATCTGCCTATGAGCAATTGATCAACAACCTTGATCGAGATCTACAGTATGCTATTAGAGTAGAGG GCAAGATGGATTTGGAATCTGTCTCCAATTACGATGAAGTAAAAGATGCTATCATGGAAAAGCTGATAAAATTACGAGATAAACCAATACGTGAAGAATG CCCCCTCATTTATCATCTGGATGTAGCTGCTATGTATCCAAACATAATTTTAACAAACCGGCTTCAGCCACCATCAATTGTTACGGATGAGGTTTGCACC GCTTGTGATTTCAACCGTCCTGGAAAGACTTGTTTACGAAATCTTGAGTGGGTTTGGCGCGGAGAAACATTCACAGCAAAGAAAAGTGACTATAATCATG TAAAGAAGCAGATTGAGTCAGAGTTTGTTGAGGGTGCTGATGATAGGCCATCAAAGTCTTTTCTCGACCTGCCCAAGTCAGAGCAACAATTAAGGCTGAA AGAGCGTTTAAAGAAATACTGCCAGAAGGCATATAAACGGGTACTCGACAAGCCAGTTACTGAACTTCGTGAAGCAGGAATCTGCATGCGCGAAAATCCA TTTTATGTTGACACTGTTCGCAGTTTCCGGGATAGAAGATATGAATATAAAGGTCTTAATAAAGTTTGGAAGGGAAAACTATCTGAAGCAAAATCCAGTG GTAATTCTATGAAGATCCAGGAAGCACAAGACATGGTAGTGCTTTATGATTCATTGCAACTTGCCCACAAGTGTATTCTTAATTCCTTTTATGGATATGT GATGCGCAAGGGTGCAAGATGGTACTCCATGGAAATGGCTGGAGTAGTCACATATACTGGTGCGAAAATCATTCAGAATGCCCGCCTGCTGGTAGAGAAA ATAGGGAAACCACTTGAACTTGACACAGATGGAATCTGGTGTGCACTTCCTGGATCATTTCCAGAAAATTTCACTTTTAAAACAAAAGAATCAAAGAGGA AGTTGACAATCTCATACCCTTGTGTCATGCTTAATGTTGATGTGGCAATAAATAATACAAATGACCAGTACCAGACCCTCACAGATCCTATTAAGAAAAC TTATACAACTCATAGTGAATGCTCTATTGAGTTCGAGGTGGATGGACCATACAAGGCTATGATCCTTCCTGCTTCCAAGGAAGAAGGAATTCTAATTAAA AAGCGGTATGCTGTTTTTAATGATGATGGAACTCTTGCAGAGCTGAAAGGTTTTGAGATCAAGCGCAGAGGTGAACTGAAGCTAATCAAAGTTTTCCAGG CTGAGCTTTTTGGCAAGTTTCTCCATGGCTCAACCTTAGAAGAATGCTATTCAGCTGTCGCTTCTGTTGCAAACAGCTGGCTTGATCTTCTTGATAGCCA AGGAAAGGATATCGCAGACAGTGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAGTCTTTAGTTGATTATGGTGAGAAGAAGTCTTGTGCT GTTACCACTGCTAGACGTCTTGCTGACTTTCTAGGTGTTGAAATGGTCAAAGACAAAGGTCTTCGATGTCAATACATCGTAGCAAGTGAACCTAAGGGAA CACCTGTAAGTGAGCGTGCTGTTCCTGTGGCAATATTTGAGACAGATGCTGACAGGATGAAGTTCTTTGTTCGGAAATGGTGCAAGGTCTCATCAGATGT TGGCATCCGATCAATAATTGACTGGTCCTATTACAAACAGCGGCTTAGTTCTGCAATTCAAAAAATTATCACTATCCCTGCTGCAATGCAACAAGTTGCA AATCCCGTCCCTAGAGTAGTTCATCCTGATTGGTTGCATAAGAAGGTCCGTGAGAAGGAGGACAAGTTTCGCCAACGAAAACTAGTTGATCTCTTCCCAA AAGTAAGCCGGGATGAGTGCTTAAAAAGGCATGACGAATCTGATAGTATCCGCCTTGTGAGGGATGAAGAGATGGTTAATGACTTGGAGGACTTCGGAAA CAAGACCAAGAATTCTACATTTGGACCTAGACCAATCATACGACATTATGAAGCTAATAATGAACGACATCCTTTGAATGCCAATTGTGAAGAAGGTTTT GACCAGCAACAAAATGATAATAACAGCAATGATCAGCCACTTTCACAAAATGATATATCGTGTGATGATGTGGATAGAACTGTAGATTATCAAGGATGGC TTCAAATAAAGAAGAGAAAGTGGAAACATATCCTAGAAAGGAGAAAGAAGCGAAGATTGCAGAGTTCTAAGAATTCTGACCGTGTATATGACACTCTTGA ACAAATAAACGGTAAGAATAATCAGGGAAGAAGTAATATCAGTTCATATTTCAGAAGACATGAGGTGCTTCTGACGCAGTACCACTGGCAGATAATACAG CTTGTTCACAGTTCACAGATTGGACAGTTTTTTGCTTGGGTTGTTGTTGATGGGGTTATGGTTAAGATTCCTGTTTGTGTTCCTAGAGTCTTTTACCTCA ATTCTAGATCACCAATTACTGAAGAATTTCTGGGCAAACGTGTCAACAAGACTCTTCCTCATGGAAGGCATAGTTATAACCTGTATGAGGTCACAATTAA TGAAGTTCAGTTTAGGGAAGCAAGCAAAAAACTTGCAGCTCTTCTTGCTGATCCTGATGTTGAGGGAATATATGAAACCAAGGTGCCACTGGAGTTCAAG GCTATAATCCAACTTGGTTCTGTATGTAAGGTGGACAAAACTGCTAAAAAACGTAGTCTACAGGACCCATGGAATTTGAGTGAATTGCACATGAAGACCA CAACAGAATGTGTTTATCTCGAAAAGTCCATACAGTTCTTTTACCTCTATCATAGCATCTCTGAGGGACGCGCTATATATGTTGGGTATTTTCCTGTATC GAAAGTAATAACAGTTGTGGTAGTTAATCCCTACCAAAACAAAGATTTATCACCATCTTTTCTTGAAAGACAATTTCATGATGGCTGCCGAGCTTTGTCT ATTGAGGCACCTCCCAGGAATGACATTACTTTTAAGGTGGACTATGTTGGATATGTCAAGGATGCTGAAACAGTAATGCAAAGAGCAATAGATGATCACA GGAATGAACATCATGGTCCTATGGTTGCTGTCATTGAATGCCCCGATGTTCAACTTGTAAAATTGGGTATTCGAGCGCTAGATGAATTTCCATGCCTGAG TGTACCTTCTAATGCACGTGATAGTCAGTATCAGATTCTTGGATGGCAACAACTTGCTGCAAAAATTGGAATGCAACGTTGTGCCGCGTCAGCCCAATGG CTTAACGAGAGAATTGCTATCTCAAGATATGCGCATGTGCCATTGGGGAATTTCGAACTTGACTGGCTTATATTTACAGTGGATACCTTCTTTTCAAGAG CGTTGCATGATAATCAACAGGTACTTTGGATATCTGATGACGGTCTTCCAGATTTAGGTGGCATCAGTGATGAAGAGACCTGTTTTGTGGACGAGGTCCG CCAACCTGTTTGTAATTTTCCTGGAGCTTATAGAAAAGTGTCTGTGGAGCTTAAGATTCATCACCTGGCTGTGGATGCTCTTCTAAAATGCAACCAGATT AATGAATTGGAAGGAGGTGCATTATTAGGATTTGACCATGAATTCAATTCTGGAGCAATTTCCATGAATGGTCAGAATGGATTTGATGAGGCTACCTCAT GTGCACATGCCCTTCGAGTTCTAAAACAATTGATTCAGCGATGCCTTTCGGATGCAGTTACATCTGGAAATGTATATGCTGATGCAATATTACAAAATCT ATATCGGTGGCTTTGCAGTCCTCGATCAAAACTTCATGATCCAGCTCTTCACCAGCTACTCCACAAGGTAATGCAAAAGGTCTTTGCATTGTTGTTGGCA GAGTTCCGCAAGCTGGGGGCAACAATTGTGTTTGCAAACTTCTCAAAGATTATTATAGACACGGGGAAATATGATCTGTCTACAGCCAAAGCTTACTGTG ATAGTTTGTTGCGAACCATACAATCTAGAGACCTATTTGAATGGATTGAGCTTGAACCACTGCAGTTCTGGCACTCATTGCTATTCATGGATCAGCATAA CTATGGTGGAATACCAGTAAAATTGGAGGAAGCCATAAATGATGAATCTCAAGTTGACATTATATCGAGCTGGTCTATTGCTGAATATTTGCCCAAGAAA ATTCAGGACCATTTCATTTTCATCGTTTCTCAGTTCTTGTATATGCCCTGGAAGTATGCACAAAAACAAGCAGCAAAAAGGACTTCATTGCTGAATGATG ATGAATCCTGCACCCCATCGATTAACATCGGATCTGCAGAGGCTATTGAATCAGAAATAACGGAGAATATTAAGCAGCAGATCAGCTCTTATTTTGCAGA CAAGCTTCTAGGAATTGTTAGCGATATTGTTCTTCATATGAAGGGGACAAACAAATCAGAAAACGACCAGAGTATATCATCTGGCCTTCCTCAACTTGGG GGTGATGTTCATAGAGGGGATGCTGCCTTGGAATTTATCAAGCATGTGTGTGCTGTCCTGGCCCTTGACCAAAGTGTACATCATGATGTTTTGGTCATGA GAAGGAATTTGTTGAAATATGTTCGTGTCAAGGAGTTTGCTCCAGAAGCTGAGTTTCGTGATCCTTGTCAATCCTTCATCTTATCCAATGTCATATGCAG CTATTGTAGTGACTGCAGAGACTTGGACTTGTGCCGTGACTCGGCATTATTGACTCAAGAGTGGCATTGTGCCGTGCCACAGTGTGGCCAGCCTTATGAC CGTGAGGTGATGGAGAATGCTCTACTTCAGATTGTACGACAAAGAGAACGGCTATACCACCTGCAAGATCTGGTGTGTGTCAGGTGCAACCAGGTTAAAG CTGCACATTTAGCTCAGCAATGTGCATGTGGAGGCTCCTTTAGGTGCAAGGAAGGTGTAAGTGAATTTCGCTCTAAAATGCAGGTTTTCTTAAACGTAGC AATTCGACAGAAATTCCAACTTCTCCAAGAATGCACCTCCTGGATTTTAAAATCTTAGTCATTAAAATTTATAAATGAGTTCCTTGGGTAGGGGAGTTAC TATTATTGTGACTAAAACTGTGCAAGTAACAGGATTTAGTGTATACAGCGGGTGATTGCAATTTGCAAGCAAAAAGTTTTCCGCATGAGGGGGGAATCGA ATGCCAAACAGGTAGTAAATTTTCAACTATTTGCAGTGATGTAAAAATGTCTATAAAATTATCTTTTCGTTTTTTTTGTGTGGGGTGGGGGGTTGAGTTA TGAAATGTTTATCTTCATCAGTGAAACGTATGTGCTATGTGCTCATCATATTAAGCTTAAGTGTCAGAAAGGAGTAATTTAATGCATCACATAAAACTAA AAAAAAGGCATGGCGCAGTGCAAAGGCATCACATAAAACTAAAAAAGAGGCATGGCGCAGTGCAAAGGCTCTGCTATGTGAGTGATTATGTTATGAATTG GCCTACATTAGATTTTTGTTAGTGATCCCAAAATACCCTTAAAATTCATTTTAGGTTATGTATATTTGAGTTTTGGAGAGCAGGCGAAAAGCTTCAGAAT TTTCTCATAAATATATATATATAGCTGAGGGATCGATATACACCTATTTTAAGTTACACTGGTTACTATTTGAAATTTTACCCATTTGGTCCGTTAGATC TAAGAAAATGAATGAATAAGATTGAGTGTAACCAGTGTAACTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_38520; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_88816
| Blastp | DNA polymerase epsilon catalytic subunit A from Arabidopsis with 70.87% of identity |
|---|---|
| Blastx | DNA polymerase epsilon catalytic subunit A from Arabidopsis with 71.12% of identity |
| Eggnog | DNA polymerase(COG0417) |
| Kegg | Link to kegg annotations (AT1G08260) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453891.1) |
| Pfam | DNA polymerase family B, exonuclease domain (PF03104.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |