| Id Trinity | FTRINITY_DN53967_c7_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_88819 |
| Sequence | GAAAATGCAAGCTTCAGCCTCCAAAAGACTATTCAGTCTTATTCTTTTAGATCAGTAGAGAGCTACTTCAACCTCGTCTAACCGTAAAGCCTCCGATATC ATCGTCGCGAACAATGAACGGCGCCGGAAACCGTAGATGGGAGCGCAGAGACAATAACAACAACAACGGAGGATCCAATAAGCAGAAGCTGATTCGTAGC GCTGAGGAAGAACTCGAATCCAAATTAGGGTTCGATATTTTCTCCGAGGGCGATAAACGACTTGGATGGTTGCTCAATTTTGCAACGTCATCGAGTGAAG ATGAAGACACACACAAAGTCTACAGTTGTGTTGATCTATACTTTGTTACACAGGATGGGTCTTCATTCAAGACAAAATACAGATTTCGTCCTTATTTCTA TGCAGCTACGAAGGATAAAATGGAGATGGATGTTGAAGCATACCTGAGGCGACGTTATGAAAGTCAGATTGCAGATATTGAAATAATAGAGAAAGAGGAC TTGGATCTTAAAAACCATTTGTCTGGATTAAAAAAATATTATTTAAAGATATCATTTGATACCGTGCAACAATTGATGAATGTGAAGAGGGACCTCATGC ACGTAGTTGAAAGAAATCAGGCAAAGTCTGATGCTGCAGATGCCTATGAGTCTATATTAACTGGGAGAAGAGAACAAAAACCTCAAGATTTTCTTGATTG CATAATCGATCTCCGTGAATATGATGTTCCTTATCATGTTCGCTTTGCCATTGACAATGATATACGGAGTGGCCAGTGGTATGATGTTGGAGTGTCCAAT ACTGGGGTTACACTTGAGAAGAGGACAGATCTTCTGCAGCGTGCCGAAGTTCGTGTCTGTGCATTTGATATTGAGACCACAAAACTTCCATTAAAATTTC CTGATGCTGACTATGATATAATTATGATGATTTCATACATGGTAGATGGACAAGGGTACTTGATCATAAACCGAGAGCGTGTTGGGGCAGATATAGAAGA TATAGAGTACACTCCAAAGCCAGAGTTTGAAGGGTGTTTTAAGGTTACAAATGTCCAAAACGAGGTTCAGCTTCTCAGATTATGGTTCTCTCATATGCAA GAGGTGAAACCTGGTATCTATGTGACTTATAATGGTGATTTCTTTGATTGGCCATTCTTGGAACGAAGGGCAGCCAGCCACGGGTTCAAAATGAGTGACG AATTGGGGTTTCAATGTGATACAAATCAAGGAGAATGTCGTGCCAAGTTTGCTTGCCATTTAGATTGTTTTGCTTGGGTTAAACGTGATAGTTATCTTCC ACAGGGGAGCCAAGGCCTAAAGGCTGTCACAAAAGCAAAGTTGGGTTATGATCCGTTGGAGGTAAACCCCGAGGACATGGTTCGCTTTGCAAAGGAAAAG CCTCAGATGATGGCTTCCTACTCTGTTTCTGATGCAGTGGCAACTTATTACTTATATACAACTTATGTTCATCCCTTTATTTTCTCTCTTGCCACTATTA TACCCATGTCACCAGATGAGGTTTTGCGCAAAGGCAGTGGGACCCTCTGTGAAATGTTGCTCATGGTCCAGGCATACAAGGCCAATGTTATATGTCCTAA CAAACACCAATCTGATCCAGAGAAGTTTTATAACAACCATCTTCTTGAGAGTGAGACATACATAGGTGGCCATGTTGAATGCCTAGAAACTGGTGTGTTT AGATCTGATATTCCATCTAGTTTTACACTCGAGCCATCTGCCTATGAGCAATTGATCAACAACCTTGATCGAGATCTACAGTATGCTATTAGAGTAGAGG GCAAGATGGATTTGGAATCTGTCTCCAATTACGATGAAGTAAAAGATGCTATCATGGAAAAGCTGATAAAATTACGAGATAAACCAATACGTGAAGAATG CCCCCTCATTTATCATCTGGATGTAGCTGCTATGTATCCAAACATAATTTTAACAAACCGGCTTCAGCCACCATCAATTGTTACGGATGAGGTTTGCACC GCTTGTGATTTCAACCGTCCTGGAAAGACTTGTTTACGAAATCTTGAGTGGGTTTGGCGCGGAGAAACATTCACAGCAAAGAAAAGTGACTATAATCATG TAAAGAAGCAGATTGAGTCAGAGTTTGTTGAGGGTGCTGATGATAGGCCATCAAAGTCTTTTCTCGACCTGCCCAAGTCAGAGCAACAATTAAGGCTGAA AGAGCGTTTAAAGAAATACTGCCAGAAGGCATATAAACGGGTACTCGACAAGCCAGTTACTGAACTTCGTGAAGCAGGAATCTGCATGCGCGAAAATCCA TTTTATGTTGACACTGTTCGCAGTTTCCGGGATAGAAGATATGAATATAAAGGTCTTAATAAAGTTTGGAAGGGAAAACTATCTGAAGCAAAATCCAGTG GTAATTCTATGAAGATCCAGGAAGCACAAGACATGGTAGTGCTTTATGATTCATTGCAACTTGCCCACAAGTGTATTCTTAATTCCTTTTATGGATATGT GATGCGCAAGGGTGCAAGATGGTACTCCATGGAAATGGCTGGAGTAGTCACATATACTGGTGCGAAAATCATTCAGAATGCCCGCCTGCTGGTAGAGAAA ATAGGGAAACCACTTGAACTTGACACAGATGGAATCTGGTGTGCACTTCCTGGATCATTTCCAGAAAATTTCACTTTTAAAACAAAAGAATCAAAGAGGA AGTTGACAATCTCATACCCTTGTGTCATGCTTAATGTTGATGTGGCAATAAATAATACAAATGACCAGTACCAGACCCTCACAGATCCTATTAAGAAAAC TTATACAACTCATAGTGAATGCTCTATTGAGTTCGAGGTGGATGGACCATACAAGGCTATGATCCTTCCTGCTTCCAAGGAAGAAGGAATTCTAATTAAA AAGCGGTATGCTGTTTTTAATGATGATGGAACTCTTGCAGAGCTGAAAGGTTTTGAGATCAAGCGCAGAGGTGAACTGAAGCTAATCAAAGTTTTCCAGG CTGAGCTTTTTGGCAAGTTTCTCCATGGCTCAACCTTAGAAGAATGCTATTCAGCTGTCGCTTCTGTTGCAAACAGCTGGCTTGATCTTCTTGATAGCCA AGGAAAGGATATCGCAGACAGTGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAGTCTTTAGTTGATTATGGTGAGAAGAAGTCTTGTGCT GTTACCACTGCTAGACGTCTTGCTGACTTTCTAGGTGTTGAAATGGTCAAAGACAAAGGTCTTCGATGTCAATACATCGTAGCAAGTGAACCTAAGGGAA CACCTGTAAGTGAGCGTGCTGTTCCTGTGGCAATATTTGAGACAGATGCTGACAGGATGAAGTTCTTTGTTCGGAAATGGTGCAAGGTCTCATCAGATGT TGGCATCCGATCAATAATTGACTGGTCCTATTACAAACAGCGGCTTAGTTCTGCAATTCAAAAAATTATCACTATCCCTGCTGCAATGCAACAAGTTTGA TAATTTTTCCTTTCTGTGAGTTGAAATCATCCATTGTTGTTCTTATTTTTTTTAAAAAGAGTTTAATTGTCACAGGTTGCAAATCCCGTCCCTAGAGTAG TTCATCCTGATTGGTTGCATAAGAAGGTCCGTGAGAAGGAGGACAAGTTTCGCCAACGAAAACTAGTTGATCTCTTCCCAAAAGTAAGCCGGGATGAGTG CTTAAAAAGGCATGACGAATCTGATAGTATCCGCCTTGTGAGGGATGAAGAGATGGTTAATGACTTGGAGGACTTCGGAAACAAGACCAAGAATTCTACA TTTGGACCTAGACCAATCATACGACATTATGAAGCTAATAATGAACGACATCCTTTGAATGCCAATTGTGAAGAAGGTTTTGACCAGCAACAAAATGATA ATAACAGCAATGATCAGCCACTTTCACAAAATGATATATCGTGTGATGATGTGGATAGAACTGTAGATTATCAAGGATGGCTTCAAATAAAGAAGAGAAA GTGGAAACATATCCTAGAAAGGAGAAAGAAGCGAAGATTGCAGAGTTCTAAGAATTCTGACCGTGTATATGACACTCTTGAACAAATAAACGGTAAGAAT AATCAGGGAAGAAGTAATATCAGTTCATATTTCAGAAGACATGAGGTGCTTCTGACGCAGTACCACTGGCAGATAATACAGCTTGTTCACAGTTCACAGA TTGGACAGTTTTTTGCTTGGGTTGTTGTTGATGGGGTTATGGTTAAGATTCCTGTTTGTGTTCCTAGAGTCTTTTACCTCAATTCTAGATCACCAATTAC TGAAGAATTTCTGGGCAAACGTGTCAACAAGACTCTTCCTCATGGAAGGCATAGTTATAACCTGTATGAGGTCACAATTAATGAAGTTCAGTTTAGGGAA GCAAGCAAAAAACTTGCAGCTCTTCTTGCTGATCCTGATGTTGAGGGAATATATGAAACCAAGGTGCCACTGGAGTTCAAGGCTATAATCCAACTTGGTT CTGTATGTAAGGTGGACAAAACTGCTAAAAAACGTAGTCTACAGGACCCATGGAATTTGAGTGAATTGCACATGAAGACCACAACAGAATGTGTTTATCT CGAAAAGTCCATACAGTTCTTTTACCTCTATCATAGCATCTCTGAGGGACGCGCTATATATGTTGGGTATTTTCCTGTATCGAAAGTAATAACAGTTGTG GTAGTTAATCCCTACCAAAACAAAGATTTATCACCATCTTTTCTTGAAAGACAATTTCATGATGGCTGCCGAGCTTTGTCTATTGAGGCACCTCCCAGGA ATGACATTACTTTTAAGGTGGACTATGTTGGATATGTCAAGGATGCTGAAACAGTAATGCAAAGAGCAATAGATGATCACAGGAATGAACATCATGGTCC TATGGTTGCTGTCATTGAATGCCCCGATGTTCAACTTGTAAAATTGGGTATTCGAGCGCTAGATGAATTTCCATGCCTGAGTGTACCTTCTAATGCACGT GATAGTCAGTATCAGATTCTTGGATGGCAACAACTTGCTGCAAAAATTGGAATGCAACGTTGTGCCGCGTCAGCCCAATGGCTTAACGAGAGAATTGCTA TCTCAAGATATGCGCATGTGCCATTGGGGAATTTCGAACTTGACTGGCTTATATTTACAGTGGATACCTTCTTTTCAAGAGCGTTGCATGATAATCAACA GGTACTTTGGATATCTGATGACGGTCTTCCAGATTTAGGTGGCATCAGTGATGAAGAGACCTGTTTTGTGGACGAGGTCCGCCAACCTGTTTGTAATTTT CCTGGAGCTTATAGAAAAGTGTCTGTGGAGCTTAAGATTCATCACCTGGCTGTGGATGCTCTTCTAAAATGCAACCAGATTAATGAATTGGAAGGAGGTG CATTATTAGGATTTGACCATGAATTCAATTCTGGAGCAATTTCCATGAATGGTCAGAATGGATTTGATGAGGCTACCTCATGTGCACATGCCCTTCGAGT TCTAAAACAATTGATTCAGCGATGCCTTTCGGATGCAGTTACATCTGGAAATGTATATGCTGATGCAATATTACAAAATCTATATCGGTGGCTTTGCAGT CCTCGATCAAAACTTCATGATCCAGCTCTTCACCAGCTACTCCACAAGGTAATGCAAAAGGTCTTTGCATTGTTGTTGGCAGAGTTCCGCAAGCTGGGGG CAACAATTGTGTTTGCAAACTTCTCAAAGATTATTATAGACACGGGGAAATATGATCTGTCTACAGCCAAAGCTTACTGTGATAGTTTGTTGCGAACCAT ACAATCTAGAGACCTATTTGAATGGATTGAGCTTGAACCACTGCAGTTCTGGCACTCATTGCTATTCATGGATCAGCATAACTATGGTGGAATACCAGTA AAATTGGAGGAAGCCATAAATGATGAATCTCAAGTTGACATTATATCGAGCTGGTCTATTGCTGAATATTTGCCCAAGAAAATTCAGGACCATTTCATTT TCATCGTTTCTCAGTTCTTGTATATGCCCTGGAAGTATGCACAAAAACAAGCAGCAAAAAGGACTTCATTGCTGAATGATGATGAATCCTGCACCCCATC GATTAACATCGGATCTGCAGAGGCTATTGAATCAGAAATAACGGAGAATATTAAGCAGCAGATCAGCTCTTATTTTGCAGACAAGCTTCTAGGAATTGTT AGCGATATTGTTCTTCATATGAAGGGGACAAACAAATCAGAAAACGACCAGAGTATATCATCTGGCCTTCCTCAACTTGGGGGTGATGTTCATAGAGGGG ATGCTGCCTTGGAATTTATCAAGCATGTGTGTGCTGTCCTGGCCCTTGACCAAAGTGTACATCATGATGTTTTGGTCATGAGAAGGAATTTGTTGAAATA TGTTCGTGTCAAGGAGTTTGCTCCAGAAGCTGAGTTTCGTGATCCTTGTCAATCCTTCATCTTATCCAATGTCATATGCAGCTATTGTAGTGACTGCAGA GACTTGGACTTGTGCCGTGACTCGGCATTATTGACTCAAGAGTGGCATTGTGCCGTGCCACAGTGTGGCCAGCCTTATGACCGTGAGGTGATGGAGAATG CTCTACTTCAGATTGTACGACAAAGAGAACGGCTATACCACCTGCAAGATCTGGTGTGTGTCAGGTGCAACCAGGTTAAAGCTGCACATTTAGCTCAGCA ATGTGCATGTGGAGGCTCCTTTAGGTGCAAGGAAGGTGTAAGTGAATTTCGCTCTAAAATGCAGGTTTTCTTAAACGTAGCAATTCGACAGAAATTCCAA CTTCTCCAAGAATGCACCTCCTGGATTTTAAAATCTTAGTCATTAAAATTTATAAATGAGTTCCTTGGGTAGGGGAGTTACTATTATTGTGACTAAAACT GTGCAAGTAACAGGATTTAGTGTATACAGCGGGTGATTGCAATTTGCAAGCAAAAAGTTTTCCGCATGAGGGGGGAATCGAATGCCAAACAGGTAGTAAA TTTTCAACTATTTGCAGTGATGTAAAAATGTCTATAAAATTATCTTTTCGTTTTTTTTGTGTGGGGTGGGGGGTTGAGTTATGAAATGTTTATCTTCATC AGTGAAACGTATGTGCTATGTGCTCATCATATTAAGCTTAAGTGTCAGAAAGGAGTAATTTAATGCATCACATAAAACTAAAAAAAAGGCATGGCGCAGT GCAAAGGCATCACATAAAACTAAAAAAGAGGCATGGCGCAGTGCAAAGGCTCTGCTATGTGAGTGATTATGTTATGAATTGGCCTACATTAGATTTTTGT TAGTGATCCCAAAATACCCTTAAAATTCATTTTAGGTTATGTATATTTGAGTTTTGGAGAGCAGGCGAAAAGCTTCAGAATTTTCTCATAAATATATATA TATAGCTGAGGGATCGATATACACCTATTTTAAGTTACACTGGTTACTATTTGAAATTTTACCCATTTGGTCCGTTAGATCTAAGAAAATGAATGAATAA GATTGAGTGTAACCAGTGTAACTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_38520; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_88819
| Blastp | DNA polymerase epsilon catalytic subunit A from Arabidopsis with 84.77% of identity |
|---|---|
| Blastx | DNA polymerase epsilon catalytic subunit A from Arabidopsis with 70.26% of identity |
| Eggnog | DNA polymerase(COG0417) |
| Kegg | Link to kegg annotations (AT1G08260) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453891.1) |
| Pfam | DNA polymerase family B, exonuclease domain (PF03104.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |