Ll_transcript_140705

Id TrinityFTRINITY_DN54001_c0_g1_i11
Name TranscriptLl_transcript_140705
SequenceGCTTGTAGTCTCTCAACCCACTAGGGTTTAAAATTGTTCGTCCTGAGAGCAGACGTGTGCACATTTGAAAGACAAGAAAAGAATCAACGACTACGCCACC GTCTCCAACAACTTCTGGCACAAAACAAGATGCGTAGGAACAGTCCGGGATACTACAGTCCTCCAAGGAGAGGATACGGCGGTAGAGGGAGATCACCGCC GCCGCCGTCACCTCCTTATAGGAGGGGACACGGCGGTGGAGGAGGCAGGCGCAGGGAAAGCAATAATGGAAGCCTTCTTGTCAGGAATATTCCTCTCGAT TGTCGACCTGAGGAACTTCGGATCCCGTTCGAACGGTTCGGTCCGGTTCGCGATGTCTACATTCCAAAGGACTATTACTCAGGACAACCCCGAGGATTTG CCTTTGTGCAATTTGTGGATCCTTATGACGCCTCGGAGGCACAGTACCATATGAACGGACAAATTTTTGCTGGAAGAGAAGTAACCGTAGTTGTGGCTGC AGAGACAAGAAAGAGACCAGAGGAGATGCGTCACAGGACTAGTAGGTTCAGAGGACAGGGGAGCTATGGGGGGCGAAGGTCTTCACCTTATGGTAATATC TTCTTTAAAATCTCAAGTTGCATTTACCTTTTCAAATCGTTACATCATGCATGGATAAGTGGAGGGTTTTCCTTCATTGGAAGGTGGTGAACATATAAAG AGGGGAAACAAAAAGAAATTCGCATAAGGGAAGAAGGGAAGGAACTGGGGTTGACTCTTTTTTTAAAGTTTTATAGAAAAACCCCTAAAAAACAATGCTA TGTAAATAAGAAAGAAGGGCAAATAGGATATCTCCCATTTAAATTTTGGTTTCATTACATAATTTAAGAACTTGAAGACTGGTTTCTTGTTGGAATGCTG GTTCTTCTGAATGATTGGTGACAGCATGTATTGCATGATGTTTTCTTGCTCATCTTTTGATAGTTAAGACTAGTCCGTACAGGCTTATATCGCTGGGGTG AGGCTATTAATAACACTCGCAAATGTGTATTCACATTTCCTATTTTAACGAATCCAAATTTTAATTTAAAAACAAAATATTTACTGATCTCTAATGAAGA GTGTCCAGAGAAACATTCCTTGCCTGAGGACATATGCTTTGTTATTTTATTCTGTATCCTACTCACCCTCTCAACTTCCAAGGCATCTTGTTAAATTTAG GATAGTGAACTTGTTTCACCGGTTGACTTTCATATATAATATTTTCAAGAATTGTTTACATTGAATTTTTGTTCTTGTGTTGGCTCAAATGTGATATGAC ACTACTTAACTGGTAACTTTTGTTTATAATTATGTCAAATCCATTAGGGCGTTATCGATCTCGCTCAATTTCCAGATCTCGCTCACGCTCACCACCTTAT CACTCTGGTTC BLAST
Tissueflowers
Gene nameLI_gene_38825; 
Additional informationdetails; 

Expression of Ll_transcript_140705

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_140705

BlastpSerine/arginine-rich SC35-like splicing factor SCL30 from Arabidopsis with 80.29% of identity
BlastxSerine/arginine-rich SC35-like splicing factor SCL30 from Arabidopsis with 83.15% of identity
EggnogRna-binding protein(COG0724)
KeggLink to kegg annotations (AT3G55460)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019460827.1)
PfamRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;