| Id Trinity | FTRINITY_DN54030_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_140486 |
| Sequence | AAATCATTAAATTAATTTGTATCTCATATTAATCTAGGACACGAGTGTAATACAACTGGAGTATAGTTGTGACTAGCGAAAGAAAATGCAAGCAACAAAC CAGAAGCAGAATTGTAGCAATTAGCAACACACCATGTCGTCTTCCCCTTCTTTTTCATCATCAGAATCAGAATCAGAAACTCCTCACAACCTAATCCCAT CCCTCCCCGATGACGTGGCAATTAACTGTCTCTCCCGTGTCCCTCGTTCCCACCACCCAACCCTCTCTCTCCTCTCCAAACCCATCCACTCCCTCCTCTC CTCCCCTCTCTTCTTCTCCTCCCGCTCCTCCCCCGAACACCTCCTCTACCTCACTCTCCGCCCACGCGCCTCTCCCTTACAACACTTCACGCTCCACCTC AACCCCTTCACCAACCGCCGCTACCTCGTTCCCCTCCCTCCCACCCCTTCCCCCTCCGTTGGCTCCGCTTATGCTGTCCTGGGACCCACCATCTATGTCA TCGGTGGGTCCCGCAATGATATTCCTTTTAATCATGTTTGGCTTCTTGACTGCCGCTTCCACCGTTGGATCCCTGGTCCCAGCATGCGCGTCGGGCGTGA GTTCCCTGCTGCTGGTGTTGTTGACGGTAAGATCTATGTTATTGGTGGGTGCGTGGCGGACACGTGGTCACGCTCTGCTGCATGGGCGGAAGTTTTTGAC CCTGCTGTGAACCGGTGGGAGCGCGTAGCGAGCCCGGTCGAGTTTCGGGAGAAGTGGATGCACGCGAGTGCTGTAATTGGTGGGAAGTTTTATGCGATGG CGGACCGTGGTGGGATGGTGTTTGATCCGAGGAGTGGCGTGTGGGAGAGTGTGGGGAGGGAGATGGATAATGGGTGGAGGGGGAGGGCGTGTGTAGTGGA TGAGGTTTTGTATTGCTATGATTATTTGGGGAAGATTAAGGGTTTTGATGTGAGGAGTGGGGTGTGGAAGGAGGTGAAAGGGTTGGGGAAGGGTTTGTTG CCGAGGTTTTTGTGTGGCGCTACGATGGCGAATGTTGGCGGGAAATTGGTCGTGGTTTGGGAGTGTGATGGGAATGGGAAGGAGATGGAGGTTTGGTGTG CTGAGATTGAGGTGAAAATGGATGGGACTAATGGAGAATTGTTGGGTGAAGTTGGTTGGATTGAGAAGGTTCTTTGTGTTCCTAAAGGCTCATCCATTGT GCAGTGTTGTTCTGTCACATTGTGAACTAATGATGTTGAGCACTTGGAGTTTGATGCATATGGCGTATTTGGGTACGAGGTTTCTACAGCAAATGTCCCA TAGGATCGAGATCCTGAATGTGATACATTAAATTGCTTCTACCTGATCTGAAAAGTTTTGATCAGGTTACATCTATAGCTCCATTGTTGTATGAAATAAA ACAGGAGCTGCTCAAATAGTACTGCATCTTTACAACTGTAAAATTGCCATCATAGTTTATCTCTTCCACCTTATGAGTCAATGGAGAACCCGAGCCAATT ATTACCAGGATTTTTGGCTCTGATACTTGTTACTGAACAAATACTAGTGTCGAATGTAGCGTGAATGTGTGTATTATGTTGAAAGTAATGGCATGTGCCT TCTGTATCTGTTTCGTCTTACTATTCGCTTTGCTGGGACACATGCATTGGTTATAGATGATGCATCCTTGTGTCTGTGGAATTAAAGTTGTTAACAAACA TTGAATTTCATCTTATTGGATTTGAACGAAATTCTTATTGTATGTTTAGCCATAATATGACACTGGCCCCGACAATGAGTTTTCAGAATTTAATTGAAAG AAAATTTGTGCAGGTTCAAGCTAAAATAACTTGTGCAAATAATGCAAGATTTCACAAGTTTGTTGATATGGTTAAACAGAAATTACAATCAAAAGTGAGA GTTCTCAACATTTGTGGCTAAATATAGGGGTTGATGAGATGGCAGTTATTTGAATCAACTATATGGATCAAAATGACATTACAATGCTTATTAGTGTTTT TTGTGACAAGACCGTGTCTCTAAATCCTTATTTGTTTTGTGTGACATAGGGAGTTCATATCTATCTACTATCTTCAATTCTCTTGTACATTGCTTCGATC TAATATATTCACTGACTTGTGCATTGGAGACCTTAGTAAGTATCTATAATTGTTGTGGAGACATTGAGAACACCTAAGCCCACTGGAGGAAGGGTGTTCT TCCATCAAAGAACATTGGGGCTCTTTGTGGGATCAAATAAGTTTCAAATCTTACCAACAGAGTTACTTTCATAGGACAAACTACCCCAACAAATCGTTCT GATACCATCATCCCAAGCCTTGGAAAGTAGGAGCAAGAGGGAGCAGAGACTTTAGTTACTGTAATATTCCATCCTATCGCCCTTGGTTGCATGCCAATAG CTTTCTTTCTCCTCCATCTATCCAGCAGAGCTTTTAAGTTGATAGAGCTATTGTAATTGCATTATACAATCTCGTCAATAACAGTTGTACTGTTTCTTCT GAATACTCTGGTTAAACTAATGGCTAATGACTAGATCATTATATGTAGTGTTGGAAATATGACAAATCAAGCTTTAGTTCGGTTTAACTCGATAAATATC TACCCAATTTGACTTTAGTTATTTTTTTCATCTTTAACTTAACTTGATTTGAATTTGCCAACTATTTGATTCAACTTTTTCACTCAAAATTGTTTAGTTC ATTAGGAGTTCTTGAATTGTTCACTTCAACTTATTAGCTTGTTGGACTAATCTTGTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_39091; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_140486
| Blastp | F-box/kelch-repeat protein SKIP6 from Arabidopsis with 53.33% of identity |
|---|---|
| Blastx | F-box/kelch-repeat protein SKIP6 from Arabidopsis with 51.11% of identity |
| Eggnog | Kelch repeat-containing F-box family protein(ENOG4110X8D) |
| Kegg | Link to kegg annotations (AT2G21950) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430235.1) |
| Pfam | F-box domain (PF00646.32) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |