| Id Trinity | FTRINITY_DN54062_c1_g8_i1 |
|---|---|
| Name Transcript | Ll_transcript_142242 |
| Sequence | ATTGTCCAACTTTTTTCATATAAAATGTACGAAAAGGAAAATTTGAGTTGTTCTGGATCCAGGGATCAAATTGATAAATTTTAAGCAACAGGCCTTCATT CTAAGACCTTTGAACTCAGCTCAATAGGCAATCCCTAAATGTTGACTTTGTCACAGCGGCTGCCCTTGCCATCGGACACCCGTGGAAGCTGCTCCCTACC ACCACAAAACTGTTCCATTCACAACGAGAGAACCAACCGATTTTTTTGGTACTACCAACAGTATTCTCTCGCTCTTCCGATAATAACTTGGTGGTGCGTG ATTATCCTTCCCAACAAGTGTAGGTCCCAGGAAAGACCAACCGATTTAATCCAACTTAATAGGTTTCTTAGGGGAAAATTTGTGTTCACCAGATGGGTTC CAAACTCTTCACCAGCGTTATTTTTTCCAAACCCTACTTCCATTATTCCCATTTGATTCACACCCATTTAGTTTCAAATGATTATGATGTTAGTGCTGTG TGCAATTCCTTTAGAAAGGGTTGGAATTGGGACATCATAACCAAAAAGTTTGGTTCTTTCAAGTTAAGTGATTCAGTTGTGGAGCAAGTACTTTTGGAGT TCAGAAATCCCAGTGATGCAAAAAATGCTCTAAGTTTCTTCCATTGGTCTACAAAGAACACGGGCTTCAAACATGGGACATGGTCTTACTGTGTAGTAAT CCATATCCTTGTTAGGGCCAGGTTGGTTACGGATGCACGAGCATTGATCGAATCGGTTTTGTTGAAAATCAAGGAGAGTAGTAATAGCATGAGATTTTCT GTTGTGGATTCGCTACTTGACGGATATAAGGTTTATGATTCTCATCCTATGGTGTTTGATTTATTGATACAGGGATATGCTAAATTGAGAATGGTTGACA TTGCTTTCGATACTTGTCGTTATGTGGAGGAATGTGGGTTCTCTGTTAGTCTCGTAAGTTACAATACATTGCTTCATGTTGTACAGAAATCTGATATGTG TGCTCTAGTGTGGGATATTTATGAGCATATGATTCAAAAAAGGATTTACCCCAATGTCGTAACTTTGAGGATCATGATTAATGCGCTGTGCAAGGATGGA CAGCTGCAGAAAATTGTCGATACATTGGAAAAAATTGAGGGGAAGAGGAACTCTCCTTCAGTTATTGTCAATACCAGCTTTATTTTGAGAGTCTTAGAGC GGGGAGACATGGAAGAAAGCATGGTGCTTGTATTGGTTAAGAGACTGTTGCAGAAGAATTTGGTTCCTGATTTAGTTGCCTACTCGCTAATTGTTCATGC CAAAATTAGATTAGGAAATTTGGATTCTGCATGGGAGGTGTATCAAGAAATGGTGAAAAGAGGTTTCCATGAAAATTCTTTTGTTTATACATCATTTATT GGAGCATATTGCAGGGAGGGCAGAATCGAAGAATCGAATGGTTTGATGCAAGAAATGGAAGAAAGGGGCTTGAAGCCATTTGGCCAGACTTTTGATCATC TTATCATTGGCTGCGCTAATTTGGAACGATTGGAGGAGTGCTTGAGTTTTTGTGAGAAAATGTTAAGAATGGGGCTTATTCCTAGTTGCTTGTCCTTCAA TAAGATGGTGGAAAAGCTCGGTGAGAGAGGGGAAGTGGAGCAGGCCAATGCAATGTTGACAGTGTTGTTGGATAAAGGATTCTTACCCAACGATGTTACA TACTCTCATCTGATAGAGGGCTATGCCAAAAATGACAAGATTCAGGAAGTTCTCAAGCTATATTATGAAATGGAGTACAAGTCTATGTCTCCTGGATTAT CTATTTTCACATCAATTATTCAGAGTTTATGCCGTTGTGGAAAGCTTGAAGATGGAGAAAAGTATTTAAGAATTATGAAAGATCGTTCACTAACACCAAA CGTGTCTATATATATGGCATTGATTGCCTGCTATATGCAGAAAGGAGATAGCTTAAGGGCTCTTCATCTTCGAAATGAAATGGCTTCTTTAGAGTTGTAG CTTATATAAGATTAGCCTTTCAGAAGCCAGTGCTTGTTTTTAAGAGCTTAATGTTATTTCGTTCGATGAAAAATTGTTGAATCGGTGAAGCCATCTATAT ATGATTTAATGGAATTTTGCATCCTAAACCCAGCTACACCGAAAGAAAAGCTGCTGCATCTTAGAAAGTTGTCATACACTGAGGAGTGAAGCTGACATGT ATATTATTTCTCATGCAGGTGCTTCTCTATTGTTTTCTCTTTTCAAAATTGTTTAGGGAATTTTTTTTCATTGTGTAGAAATGGATGTTTATTTCCATGG AAAATGAAGGGAGGTTTAGAGGCTTTGGACATGTTGAGTTTGAAGCAGTAGAAGTGTAAGAGAAATTAAGCTTTTGCGAACTTGCTAGTCTGTGTTTTAA ATTGCGGTCGTGATTGCAGCATGAATTATTTTGTGAGTAAATTTTTTTTGATATCGATACGGTCTGATGCGGCTCAAATGTGGTTGGGTTGCAGCCTGAT GCGGTTGCGTTGCTGCCCGTTGCAGTCGCATCATTGAGATTCGATTTAACACCGCAATTGTGGTGTGATGCGATTGCAGCACTTACCGGCTCACCGCTAC CGCAATATTGCATCCACATCACGTGATACGGTCCGCAATTTGAAACACCGGTCTCTGTAAATCATTTTGGAATTTCCTGAGAGTTATTTAAAGTGAATCA TACTTTGGAAACAACAATAACATAAACTTCTAATATCTACCAAGGAAACATTTTAATGATTAGATTTTATTAGCCCAATTTTCTTTCTCATTTCCAGTAT TATTATTAGAAATTTAGAACTTATTGACTCCATTTATTATAAAGCAAATTGCTATCCTGTACATGGATGTGGTTGAGGCTTTATCATCACTGAATATTGA TATTGCTGCAACCTACACTCTTGGTTGGGATCATCATCAGTTCATGTTTGGCTTGAGTATTTACACTTGTCTTCGGAATCTAATGTTGGATAGGCGCCAT AAACAATAACTTGCATATATATTACTAATACACAGAGTACCATGGTATTGTGGATGGGAGGTGCATGATTATGCACTGAAAAGTGGAATCCTACTAATCA GCTTTGTAAAAATGCATTGGACCACCACTAGTAAATATCCAATTTTACGATTTCCATAATCTTATTCAAGAATTTCTTGCACATATCGTGTTATCTTTTT AAATCACGCAATTATACATTTTTAACCAGTTCATTGCCTTATCTCACTAGATGTTATTGCTACATGTAGCCGACCCTACCTAGTGGGATAAAGTTTTGGT TGTTATTGTATGTTATCGCTACACATATCATTCAATCCCATGTCTTTCAATAACAATTAGTGTTTATAAGTGATGGAGGACTATCATTGATTTGTATAGG TTTTCTGTTATATTTGTATAGCTGAATGTGTTGCTATGCCTCTTGCGTCATATGTCCTTATGTATATCCAACCGTGGTTCTTAGCAAACAACAAAGACAT ATCGAGCTGAGAATAAATTTTCTTTTCGAAATAACTAGTCATAGGACCTTGAGTTGGATAATACAGAACCATGAGAGTTGAGAAATCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_39430; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_142242
| Blastp | Pentatricopeptide repeat-containing protein At1g66345, mitochondrial from Arabidopsis with 49.5% of identity |
|---|---|
| Blastx | Pentatricopeptide repeat-containing protein At1g66345, mitochondrial from Arabidopsis with 49.5% of identity |
| Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
| Kegg | Link to kegg annotations (AT1G66345) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426560.1) |
| Pfam | Pentatricopeptide repeat domain (PF13812.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |