| Id Trinity | FTRINITY_DN54156_c4_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_43466 |
| Sequence | GGCTTCACCATCGGTTCTTCCCACCCCAATGATGAAGCTTACTGAACAAAATTTCTTGGTGTGGCGTCATTTTATGATTGTAACACTCACCTTATGTTCA TGGCACTGAGATACTTGATTGTTTTCTCACCGATGGTGATTGTCTCATTAACAAAGTCAATTCGGCTTACTTACAATGGGAGGATCTCTTGGATCCTTAA CTCGTTATCTGAAACTTTGCAACCTCGTGTTGTCTTGTTAACGGCAGTTTTGGGAGGAGCTTCACAATTTTTGTAGCTCACAGACGAAGGCTAGGGCTAG ACAACTTCGCTCAATTTCTCAGGGCTCGTCTTCGATTGCAGAGTATTTTCGCAAGATTAAGAACCTCATTGATACTCTTGTGTTTATCGGAGTTCCAATT TCATCATCTGAGCATATTGACCGTGTTCTAGATGGATTGAATGAGGAATTCTAACCTGTAATCACTTCTATTGAAACTTAGGATGATCTTCCTACATTGC ACAATCTGGAATCCTTCCTTCTCACTTTCGAGTCGCGAATGAATGGTGGAAGAGGTTTCCACTGCCAGTCGCCACTGTTGTATTATGACTTCTGCAACCG CCATGGTCATGAGATTGCCACCTGTTATTACGCTCCATATGGGTATAGTGCAGCTCTCCCATACACCCCTCCTGGTCCTGGTCCATCCGTGCGTCTCAAC TCATTTACTCAGAATGGGCCAAGTCATCATCAACATTTTAATTTTGCTAATGGGCCTCGTCATGCGGCCCACTTTCCTTCCTACACTGATGTGTATTATA TCCCTCCATCATACTTTCCTCCCACTTCTTGTCATTATACTTTTGGACCACCTCATCATCAATCTCTACTTGGGCCCAGCCCAATCTCAACTTCTTATGG TCCCTCTTCTTCCCGTGGTAATTGCTTCAACAGCTCACAATGCACTCCACATGCCATATGCTAGACTCCATATATACTAGATAGTCAGTAGCATAAAATG TGACCCACTTGAAGTATCATTGCAGTAGTTAACTAGTTTTGTGAACATAGTTTTCTGCAATACCTATGGAAAGCCTCAGAAATGCTGTGGGGTTTAGGCC ATTAAATCTTGAGGTTTAGAATGGATTTCGAAACTAACTGCAGTCACCAGGTTGGCTGGGGCTCGGGTGGTGCTTCCTTCAATAGCCAAGTCTCAGTGTT TACAACATATTCTGCCGATTAAGAGTTCCTTATCGAAAGGTATTTGTTCTGTTATTTGGGTGGCTGACATTTGGTCTCTATAGCGGTGCAGAAATAATGC TATTTTTAACAACAAGATAATAGGTTTGGAGGAGCTGTTGGATGAGATTAAGTTTAAGGCTTGGTTTTGGATCAAACGTAGACTTAAAGGGACAACAATG TCTTGGGCTGAATGAGTCAATAATCCGATTTTGTGCTTGGATTGTTATTGTTAACCACCTTCTTTGGTGAATAGGTGTTTGTTGTTCCCTCTGTATTCTT GTGGGGCTGTCATGTCCCTTGTTATTGTATATGTTTGTTCCTTTTTTTATGTAATTTTGTTCCTTTATTAATAAAAAATTTACTTACCAAAAAAAACTGC AGTCACCAGATAGTATTCTGTAATTTTGAATATAGTTGTGGTGGGTAATTGGTTATGGGAGGGATAAAAGGTTTATACAGTTAGTTAGTTGGACATATAT ATATATATATTCAGTAACAACATGGATAGTTATGAAAGAAGAGAGAAACTTATAACAATGAATTCTAAGTGTTTGAGGCTATCCTTTTACGGAATCACTC TTTCATCTTGGACATACTTTGGCTAAACTTCATTGCATTCTAGTTCTCAGTGGAGTTGGACATCAAGGTATTTTGTTTGAGACGAAAGGGAACATTTTTT ATTAACTGTTTTATCTTAAAATTGAAGATTGAGTTGAAGAGGTACCAACAAGTTGTATTATCATATTCATAGGGTGTATTTCAATTGTTGAACATGTGGT CCTTTTCAGTGTCATGTGCAATTTTCTTTATATGATAGTGAAATTAACAATTCTTCAGGTTCAAGATGAAATTGGTGCCTCACCAATTGAGATTGCTAGG GCATATATGGATTTTCGTGCATCAGAAGCAGGTCCCAGTTCTAAGAGCATTATACAAACTATTGAAAGCACAGTGTTGCATGGTGCTGAAGCTGCAATAA AACCATATGATCCATCACCATACATGAAGTCATCATCATGTTGGCCAGGTGCTATGGTACAGGATGCCTATGTAACACCACATAGTCAAAGAAGCAGATA TGGACTTCAAAATTTTCCTCGAACTCCTTATTCAAGATCTCTGTTATCAAAGTCCAAGACTAGGTTGACTCATATGCAAGGTGATAGCCATATTTCATCA ATCCCCCTCCGTCAATCTGAGGCTACTCGGTATCTGCAGGATAAATCTAAAGTCGATGCATCAGAAAGTGGATATGGATCTGTTGGACCTATTCGTCGAA ATAGGCATAAGGTTGGTGCACAATCTTCTTCAAGAAGACCAGCTTATTCATCTCTTCGTGGCCCTTCACAGTCTGGCGTTAATGAAGGTTTCACTCCTGC TGTTACAAGGAGCTCTGAACCTGATGGGAGAGGCGACAGTCATAAGCCACTAGGCTTTGAGATAGGTACTCCAACAGTACCCATGCATACCAGTTTGATG GCCAAGAGAATATTGGAGCATATTGATAGAAACATTCCCACTCCTAAAGAGAAATCTGCTGAGTTGAAGCTGGCAATCGAATGGAAGAAGCCTGAACCTA CTACCTTGTCAAAAGATGTTAGTCCTTATAAATATGATGGGCTTGATGGAAAGAAATCTGTTCTAACAAATGAAGGTCAAGGAAACTTTAATTTTGGTAT TCCACCAAAGGATATTGCTGATAATTCTACTAATGTTACAAAAGAAGGAACTTCGGCATCTGACATGAACATTCACAGAAGCATACCAAGACTTGGTAAT GATGCAATAACTACACAAAATTTCGGTGGTTCTCAATTTTCTTTCACGAAGTCTACTGAACACCAGAATGTTTTGAAGACTCTCCCAAGTGGTGATAACC CTTTTGAACTGAATCTAGAAAAGAAACCCTTTTCCAACTCTCCAGCAAGTAAACCAGTTTTACCTCCTATTTCCATCAAGAAGCATGAATCAAAATGGAC TTTTTCATCGGATAATGGCTCAGGATTTACCTTTCCCATTTCGGCGTCTTCTTCTGTATTATCTGAGCCACCAACACCATCTATCATGCCATTATTCTCC ACTGGGGATCAACATCAATCAAATGAAAGATCTACAGACCCATCATATAGTTTTGGTTTAAAAAATTCCAGTGAAGCAGTGGTTTTTAACTTCCCTTCAA CAAGCAATACTGCTGCTCATAATGATGCTGGTGAGATAAAGTTCAATTTTGGTTCAACAGAAAAGGAAAGGCTTTCATTTTCGTTTGGAAAAGATGCTAT CTGCTACTAAGTAAAATGGAAAAATGAGGTTCCAAAAGTTTTTCACTAATTTTCTGTCAATCTTTATCAGTCTCTCAGCTAGTTGTGTAGTGTACTTCGC TTTGCTTTTTTGTTATTTTGTGAAGATACAAGTAGAATTAAGCCGTTTTGAATCAGAAATTGTGTTCTTTTTATGGTCCTATGACTTCCTTTGTTTTTTC CTTTCTTTAGACCATAAGCTTGTCCGAGAAGCTGGTTTTTCTTTATGTTTGTAGAGGATCATTGTCATAGTGGATATTCAAATTTGGAACTTTATCCAAT TCTTATCAATAATACCTAGGTTTTTTCATAATGAAGCTGAATTAGGTGTCATAAGATCACTGGCCTCAATTGCTGGTGGTCATAGAAAATCTTGAATAGA AATATATACATGTCATATTTAAATAAGTATATTTATGTTTTTTTTATATTATCATTTATGATTAAATTTTATTTAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40233; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_43466
| Blastp | Nuclear pore complex protein NUP1 from Arabidopsis with 31.54% of identity |
|---|---|
| Blastx | - |
| Eggnog | nuclear pore complex protein(ENOG410XPV4) |
| Kegg | Link to kegg annotations (AT3G10650) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415343.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |