| Id Trinity | FTRINITY_DN54162_c1_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_44268 |
| Sequence | GGGGCAATAAAAAAATAAATAAAAGTAATTACGCATACATTGGGGGTTATATTTTCCTTCTGATTTGGCGGTGTAGGGTTTGCTCCTCATCTTCCTTCCA ACACATTCGCCAGATTCTCACACTCACCAAAACATGGCTACCACTTTGGCTAAGTCCTTCCTCCAAGCTGCTGCTACCGAGGAGACCGCACCCCCTCTTA GAGTCGTCCAGATTGAGGGTCTGGTTATCCTGAAGATAATTAAGCATTGTAAGGATCATTCGCCTTCTTTAGTCACCGGACAACTTCTTGGGCTTGATGT TGGTAGTGTTCTTGAAGTTACTAACTGCTTCCCCTTTCCGATGAGGGAGGAGGATGAGGAAGTTGAAGCTGATGGTGCTAATTACCAGCTCGAAATGATG AGATGCCTGAGGGAGGTTAATGTTGACAATAATACTGTTGGATGGTACCAGTCTACATTGCTTGGCTCCTTTCAGACTGTGGAACTGATTGAAACCTTTA TGAATTACCAGGAGAACATTAGGCGCTGTGTTTGCATAATATATGATCCATCAAGGTCTGATCAAGGTGTCCTGGCTCTGAAGGCCCTGAAGCTTTCTGA CTCATTCATGGAACTCTACCGCAACAATAATTTTACTGGAGAGAAGTTGAGAGAAAAGAACTTATCATGGGTGGATATCTTTGAGGAAATACCTGTAAGT TTACCTGGATTTTGCGGGCTCTGAATATTTGACCAAATAGTCTTTTAGAGTGATTTGGATGGAATAAATATTTTGCATTTGAAAAAAATGTTTCTACCGA CTTCTAGTGGATTCTTCGCTGCTTCTTTTCATTTGCTTGTTAGTTGTTGCACTTGGTTCAGTTGTTAATGCAATAAGTAAGAACAAACTAGTCATGTAAG TTGCATTACAAATTTACAATAAACTATTTTTGGTACATACTTTGTGCTATGAAATTGTATTAGTTAGCTTTGTATTAATTTTCTGTTGATAGGTTGCCAT TTCATGCTGATCTTGTTTCTTATATATTTATATCAGATCAAAGTTTCAAATTCTGCTCTTATCAGTGCTTTTATGACGGAGCTGGAACCTGATACTCCAG TCACCCAGTGTGATTATGATCGTCTGCAATTGTCAACCAGTTCATTAATGGAGAGGAATATGGAATTTTTGATCGAATGCATGGATGATTTGTCACTAGA ACAGCAGAAGTTCCAATTCTACTATCGCAACTTGTCCCGTCAGCAGGCTCAGCAGCAAGCCTGGCTTCAGAAGAGAAGGACGGAGAACATAGCACGTAAA GCCACCGGAGAGGAACCTTTGCCCGAGGAAGATCCTAATAACCCTATTTTCAAGCCACTTCCCGAGCCATCGCGGTTGGAGAGCTTCCTCATAACAAATC AAATTTCCAACTACTGCAACCAAATCAACGGTGTGTCAGGGCAGAGCTTTAACAGACTCTATTTGATGAAGGCTTTGCATGAAGATTGAAAGGAGTTTTT TGTTAGTCTATTGTGATGTAAGGTTTGAACCAATTTCTTTTCCATATATGATGAGAATTTTATTAGTATGTTAATGGATCATTATAAGTTGATGTAATTT TTGTTTATGAATCCATCAAATTGTGAGCCATATAATTGGTTCTTGTTAAGAGATTATTTCAGGTGATACTTGTTGCTCGTTAGTTTTCTTGTTATGGTTG TGATCTCCATATTATTTGGTTTCATTACTAATTTGTGCACTCATTCCGGTGTTCTAAAAACCAGTTTGTGTAGGTTGGTTCAACCAGTAAATCGGTGAAC CAGTCTCTATACCGTACGGTACAATAATCATATCGGTTTATTGATTTTTCAATATTAATGTTAATATATTAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40270; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_44268
| Blastp | Eukaryotic translation initiation factor 3 subunit H from Arabidopsis with 83.6% of identity |
|---|---|
| Blastx | Eukaryotic translation initiation factor 3 subunit H from Arabidopsis with 83.6% of identity |
| Eggnog | Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(ENOG410XSR9) |
| Kegg | Link to kegg annotations (AT1G10840) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443682.1) |
| Pfam | JAB1/Mov34/MPN/PAD-1 ubiquitin protease (PF01398.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |