| Id Trinity | FTRINITY_DN54211_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_273974 |
| Sequence | TTCAAATATTAAATAAAGTTTAAACCTCGTCTCTCTCTCCTTTCTCCTCCACTCGCGTGGCTACTAGAGTCTTCTAATTCTTCAAATTAGGGTTTATCAA GAAGGGTTTTATTAATCACAAACCTTCAACTTTTTTCATCCACGCGCCTCCACAACGATTCTAACTCCAAAATGGTTCGCTCCAATGGCCTCAGACTCCT TCAATATGTTGCTCGTCGGTCTCTCTCTGCAAACAATTCCATATGTGAAGGAATGTTACGGAAGGGTTATAGGACATTGAATTCAGGACTTCGTAATTCG TCCAGAGTTATTGGAAGTTGTTCACCAAATGTTGGAGGTGGTGTTAATTTGAAGAATTGGTTACCATTGCGAGCAGCAAATACATGTTGGGGGCCATCTA GGTCTTTTCATGGCTCAGCACCATTGGCAAAAGACTTTTATGATGTTCTTGGCGTGAGTAAGAATTCAAGTGCTTCTGAAATAAAAAAAGCATACTACGG GCTTGCAAAGAAGCTGCATCCAGACACAAACAAAGATGATCCTGAGGCTGAAAAGAAGTTTCAAGAAGTTTCATTGGCATATGAGGTTTTGAAGGATGAG GAAAAACGTCAGCAGTATGATCAGGTTGGCCATGATGCTTTTGTAAACCAACAGAGCACAGGTTTTGATGGAAACAGCGGCTTTAATCCGTTCGAGCAGA TATTCCGTGACCATGATTTTGCGAAGAGCTTTTTTCATCAGAATATTGGCGGAGAGGATGTCAAGGCATTCATTGAATTATCCTTTATGGAAGCTGTCCA AGGATGCACTAAAACTGTTACATTTCAAACAGATGTGCTTTGTAATACTTGTGGTGGGAGTGGTGTCCCTCCTGGTACAAGACCGGAAACCTGTAAGCGC TGTAAAGGCTCAGGAGTGACATATGTACAAGCTGGCCCATTTAGGATGGAACATACATGTGGTGCATGCAAAGGAACTGGCAAAATTGTATCAAGTTTTT GCAAGTCATGCAGGGGTGCAAAGGTTACCAAAGGAACAAAGTCAGTCAAGTTGGATATTATGCCTGGGATGGATAGCAACGAGATCTTAAAGGTTTATAG AAGTGGTGGTGCAGATCCTGATGGAAATCACCCAGGTGATCTTTATGTTACTATCAAGGTCAGGGAAGATCCTGTTTTCCGTAGAGAAGGATCTAATATT CATGTAGATGCTGTTTTGAGTATCACTCAGGCAATTTTAGGTGGAACCATTCAGGTCCCTACTCTTACTGGAGATGTTGTTCTTAAGGTTCGTCCTGGCA CCCAACCTGGTCAGAAGGTGGTTCTGAAAAAGAAGGGAATCAAGACAAAAAATTCTTACAGTTTTGGAGATCAATATGTTCATTTTAATGTCAGCATCCC CACAAATCTGACAGAGAGGCAGCGTGAATTGATAGAAGAGTTTTCTAAGGAAGAGCAAGGGGAAAGTGATAAACAGAAAGCTGCTTCAGCTTCAGGTTGA ACACACACTTTGAGAGCTGTTTCAGTAATATATATTACCAAATCATGGTCAAGTTTTGTAGGCTAATTAAATTATGGACTGGTATTCTTTTTAGTGTATG TAATATTTTTCGTCATAAGTGACAATGACCCACTCAAAATTTGAAGGTTATAAGGCAATCTTTTCGTGCAGCTTTTAAGATTCTAGTAATAGTACTCTAG TATGTGTTGTATATATATATATATATATCTTCTCTTAATAATATACATGGGGTGCATGCCACATTTTCATTATTTTTGCCTACTATCTTTATACATAAGA GCAGATGTATATGGATCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40684; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_273974
| Blastp | Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 58.95% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 58.95% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT5G48030) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437114.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |