Ll_transcript_274552

Id TrinityFTRINITY_DN54249_c4_g1_i5
Name TranscriptLl_transcript_274552
SequenceCAAATATATCAGATAGCAGATAGAGAAGTGAGAAGTGAGAAGTGAGAAGTGAGAAGTGAGAAGTGAGAAGTGAGAAGTGAGCGTGAAAATGTTGCAACCG CACTCCTGTTCTGCTACAACAAAATCTTCCATTACTATCCCAAACGACGCTTTCACTCCAAAGTTCATTCCTTTAAGGCGTTATTCTTCTTCTTCTTGTA TACCCACTTTTTCGTTTACCCTCCAACCACTCTCTATCACATGCCGCCACTCTAACCTCTATGAACCTAAATCATTTCCCTCTTCTCCACAAGCTCAACG CTATTCAGCACAACCAGCTTCAGTTGGAACTTTACCACCTAGGGTTTTTGTGGGGCACTCAATTTACAAAGGGAAGGCTGCACTCACTGTCTCTCCTAAA TCTCCGGAATTTCAATCATTGGAATCCGGGGCATTCAAAGTATCTAAGGAAGGTTCTGTGCTACTTCAGTTTGCTCCTGCAGTTGGTTTGCGTCAATATG ATTGGAACAGAAAACAGGTGTTCTCGCTATCAGTGAGTGAATTGGGAACTCTAATTAGCCTTGGTGCAAGGGAGTCTTTTGAATTTTTTCATGATCCAAA TCAGGGAAGAAGTGATGAAGGTAAAATTAGAAAAGTTTTGAAGGTGGAGCCACTCATGGATGGTTCTGGTCACTTATTTAACCTCAATGTTCAGAACAAG CTTGACAACATCGACGAAAATATCTTCATTCCTATTACAAAGGCAGAGTTGGCGGTTCTCAGCTCACTTTTCAATTTTATCATGCCATACCTTCTAGGTT GGCATACTTTTGGAAACTCTATAAAGCCAGATAATTCCAGCAAAGTGAATAGTGACAATCCAAGATATGGAGGAGACTATGAATGGAGCAGATAGATAGA TAGATAGATAGGGATCAATCACTTTTGCTTCTAATCACTTCATGGTGTTATCAAGTGTAGAATATGTAGTGGGATCAATCACTTCAAGAGACAGTCAACA TTTAGCACATCATGTTTCTTCTAATTGTCAATGGAGATGAAGTGTTGTATTTATAGTACACAAATATAAAGTTGTGTCCATTGAACCTAGTCAGGATGTT AGTAAGGAGAGTGAAGATAGTCCCTTCTTGCATTTGCTGCTCTTAATTAATCATCAAAACTTCACACAAGTGCAGTCATTTTCATGCATATTCATATATA GTCTGCTTTGTTAATATGCATAATAGTATATTGTGTATTTAGGAGTGTTGCCGTAAATAAAAAATGTAGTAGTAACTATTTCTAAAACCAAAAACTCAAT GGTATGGATATATAAAATACACTAAATATAATCCTACACAATTTAGTAATTGTCCTTACTTTTGTTTATAGGAGTTATTTTCATCTCAAAAAAATGTCAC TAAGACTATTCATGAAATAGATGTTTTTGCAGTAATATTTTGTCCTTTAATTATACTTGCCTCCAAGTTTGTAGTATATGATAAATGTTACTGTCTTGGG TAATTTGGAAAACCATGAAGTATTCTAATGTTCTAATAAAGTAATAGTTAGAAGGTGTTATTCAATAATGTTATTAGTTCATAGTTTGGTTTGTGAATCT GATGATACTTTTTTTATTAGTCACTATTTTAAGCATGTCATTAACACTTGATCTGTACTTCTTATAAGATAAATAAATATTTGAAGAAGTAGATGAACCT GGACATAACATTGGTCCATAGTGAGAATTGAAGAATATTGTGAAGTTGCAGGACATCTGATCATATCGATTGCCCACATGCCTCTCTGCATGTTTCCCAA AGTCTTCAGTTTCAACTTTAAAGTTATTTATCCTTTTCTGCTTTTCTGATACATACTCACAACTCACAACTCACACCTCATATATATGGAATCTAGCTAG TACCTCATTCTATGTACACACAATGTTGTGTACATAGAATGCTACACTGCTTTACTTATTTTATTTTTATACTTGTTTTACCTATAATTGCTGCACATGA TTTATTAGTTTTTTGTTTTGAATTATAAAATTCATGGCTATGAAAATGACTAAAAGGGTTTGAGAAGTGATGATTTGAATCACTTTAAGAGCAAGAAATG CAATAAGGGACTTTCTTCACTCTCCTTATCAAACATCCGGACCAGGTTCAGGAGACAGAAACTAAGGTTTCTCTGACATATATGACTGTACTATATATAA ATAGAACAGTTGATGTGCATTTGTTGAGCATGACAACTCAGGAGTTAATTGTTGGCTGTCTCTTGAAGTTCCTATGAGCACTTCACACATGTGTATCACT ACTCTAATTAGAAAGAGTTAAGAGTGGTGTGAAGTGTTTGGAGGAACTTCAAGATTCATCTAACACTGATTACCAAGATTCAACTAACAAATGCAATAAG GGTTCAACTCTATGGTTCTGCATTGTCATTTTACATTTCACACTCGATTTATTACTTTTGTTCGTTACAATATAGTATAAGATTGATGTAAATAATATAT CCTTAAAATTATTAATGTATTTTGTAATTAACTAAAAATAATAAAAAAATGTTGAGTTGTATACAGAATTTGATTAGTGTTAATGTAATTTAGTGTTACT GAAATAATAATAGTATGATGAGGTATTTGATGGTAGAGGGTAAGGCCCTAAGCGAGCCCATGGGCTTAGATTAAGCAGCAAATGAGGGTGATGTGTATGT AGGTTAACATCCTTCATTCAGAGAGAGACTCAGAGAGAGAGAGACACACAGAGAGAGACACACAGAGAGAGACACAGAGAGAGACACAGACACAGAGAGA GAGAGAGAGAGAGAATGTTTGGGCGACGCAAGTTTCTTTCCTTTCCCTTAGTCATCGGGGCAGTGATGTAAGTTTCATTCTTCTCTTTCTTTCTTTCTTT CTTGCTTTCCATATTCCTTTCATCTTATCTAACTAGGGATCTTCAATTTGTATGAATAATAATAATAATAATGTATGAATAATTAATACGAAGTGGGTGA TGCTTGTAGCATTGGTGTTGTCTCTGGGAAAGCAATATTTGGAGCCCCACTTGAGGAGTATTGGAAAAAGAAGCATCAGGAAGAAGAAGCTGAAGCTGCT GCTGCAAAGGATAATCACTCATCTTCATCTTAGGACTATTTCCTTCAATTGCATTATGCTCCAACTACTGTAACCATATTACAATTATGTTTTGCTTATT ACTGTAAAATGCTCATTTTAATAATCAAATAATATTAAAACAACCTACACAATAGAGATAATCATATGTACATCAAAATTATTTCTTTTAAGATAATCAT ACGTTCAATAGAGATGGGATTGTTAACACCAAATATGTTTTATACAGCAAGTAGTTTAAAAATAGGGGTATTCACATCAAAGGTCAAACAAAAATAAATA ATTGCAAACTGCAAAAAACTATATCTGAAAACTAATCTAAAATGAATTACATTGTTATACATTATTACATTTCACCAAATGAATTATTTTTGCTGATAAA AAATAAAACAATTGAGTAGTAAATAATGTATTAGTTTTATTATGAATTTGATGTATATGATAGAATATAGAGACATGTCTATTTTGCTACAAATTATTGT ATATTGAATATTATTACCTTTAAAGTTTAAACAGTAATTAATGTAAATGTAAAATGATACTAGGAATTTAAACCAACAAAAAAGAATAAAGGGAACGATC CGTGTCCATAAGCTTGTAGCATGTCTTGCCTTACTTGTAGCACCTTGCTCCTTCCTTCCCTCTCTCTCGGCCATCCTTTTGATCCTTTCCATCATTTTCA TTTTCATTTTCATTTTCTATCTGCAATTCATTCATCATAATACCAACACCAAT BLAST
Tissueflowers
Gene nameLI_gene_41063; 
Additional informationdetails; 

Expression of Ll_transcript_274552

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_274552

BlastpSingle-stranded DNA-binding protein WHY1, chloroplastic from Arabidopsis with 63.56% of identity
BlastxSingle-stranded DNA-binding protein WHY1, chloroplastic from Arabidopsis with 63.56% of identity
EggnogSingle-stranded DNA-binding protein that functions in both chloroplasts and nucleus. In chloroplasts, maintains plastid genome stability by preventing break-induced and short homology- dependent illegitimate recombinations. In(ENOG41124UZ)
KeggLink to kegg annotations (AT1G14410)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019454671.1)
PfamWhirly transcription factor (PF08536.10)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;