| Id Trinity | FTRINITY_DN54313_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_197879 |
| Sequence | CTTGTAGAGAAATTAATCAAAAGTTAAAATGGCCACTTGTACAAATCTTCTAGAGAAATTAGTCAAAAAAGGTTAAAATGACCATACAGTCGAAAAGCGA ATCTGGTTTCAACTCATGGGTTGTTTGTTACGTACACATACAATCCTCATCTCTGTCTCTTTCTCTATATAACATTGTGCTTTATCCATATATCTATCTC TCTATCTTCATTTCTCTTCTTCAATCTCACCCCGAAATTCCATGACAAACATGGGTGACAAAGGAGAAAAATCATGTCCCATATGCACTGAAGAGATGGA CCTGACTGATCAGCAGCTGAAGCCATGCAAATGTGGCTATGAGATCTGTGTATGGTGTTGGCACCATATAATAGAAATGGCACAAAAGGATGAAACTGAA GGCCGTTGTCCAGCCTGCCGTTCACCTTATGACAAAGAACGTATTGAGGCAATGGCAGCAAATTGCAAAAGATTAGTTGCCGAAATGAACTCGAAGTATA AAAGGAAAATGCAAAAGTTGAAGCCCAAGCCATCAGAAGGAAGGAAACATCTTACTGATGTTAGAGTCATTCAACGCAAACTAGTGTACATAATTGGTTT ACCTCTTAACCTTGCACATGAAGATCTACTTCAGCAAAGGGAGTACTTTGGCCGGTACGGAAAGGTTTTGAAAGTGTCAATATCCCGTACCGCAACTGGC ATGATCCAACATTCTGCAAAACACAGCTGTTGTGTGTATATAACTTACTCAAAAGAGTCCGAAGCAGTCCGGTGTATACAATCAGTGCATTGTTTTGTAT TGGAAGGTAGATCCTTGAGGGCTTGTTTTGGAACCACAAAGTATTGCCATGCATGGTTGAGAAATGTGGTAAAATAGTCACTTTAAGCTGATTAATATGA ATGTTTTTTTACACAACTTTGCCTTTGTGTTATATTAAATTATAAGGTTTGTCCAGCCTTGCAGCAATAGAGATTGTTTATACCTACATGACTGTGGTTC TCAGGAAGATAGCTTTACTAAAGATGAACTAATGTTAGCATTTGCAAGGTATGTTGCTTCTCAACTCATGTACCCCATCAGTCTGTTTAACTTTTGAAAC TTCTGTCTTCCTTAATAAGCATCAGCTGATCGTCTTTTATCTATATTGTTTCTTCATTTAGAGTTCAAATCCAAAGTTGCAAATCAATGTCTCTTTGTTT GCAATTTTGTAAAACCGACAGATTAGTTAAACATACATATCATACTGTCAGTATCTTACTCAAATGCATCATTTAGTTCTCTCCCTAGTTTCCATAAATA TCCCACAGTTATTGGGTTTGTCCTAATTTTATTAGTTTTTTTATACAACAACCAAGCCTTATTCATTTTTTGTAGTCCTCCTTTATGACCTGTTTTTATT TATTTTTTTCATTGCTTTCACCTCATCATGCTTGTTTAGACTTTCTCTATATCATGGTTTTTCGAATCTCATGAATCATGACTTCATTCATGCGATTCAA TGGAAGTCTTATCTGCTTGATACAGATTGTGTGGAGTGTTGTTATGTTACCAGAATAACATGTTGAATTGCGGGAACTGCATGAACTGCAATTCTGCCCT GATTCTGAAGACACATATCTCTAAGGGATATCAAGCCAAACATCACTGTTGGGAAACCAACAAAGGTCATGATAGTTTGGTGTGGCCAAATCTTGTCGAT AGAGAGTTCTGTGAAGAAGGCAGCTGGAAACAGGTTCAGGCACACCACTAATTGCTGCCCAGATATATAGATACAGTGAACCAGCAATCACTGTGTAGGG ACATAGGGTTTTCTTGATAGGTTTTAAAAATTAGAGAGATAAGAGTATGGAGAACCCTTGTAATTAATGTACAGAAAATAAGGAAACAAAAATATAAGGA AAATATTGTATATAGAAAAGGGAAATAAAAATATAAGTAAACTAGTATGCATATAAAAGGAAATCAGAAAATCATCTATTTCTTACTTTTGTAGTTTTAT TATGAAAAAATATATTCTGTATTAGTTTTAGTGATTAATTGTGTATCTTATGATTAACGATACATTTTAATTCTTGATTCAGACAATAAGAATTCTGATT TGTGATTCAATTTCTCTTATCAACTACATTTTATTGTTTATGCTTGGTAGTTGTATGGTCTTTGATTATATTTTTGTTGTATTGTATTTTGGATTTTACA GGAGTAGGGTCCAACAAATTATTGGCGCTACAAATAATTTGAATCGTCGTTCAGGCAGCGTTTTACCACCGCCTGCAGCTGACTCTAGACATACGTCATC AGCGACCGATTTAGTTTCTGGAAGTCCTTCGGAAAAAATTGAGAACCAGATCAAAGGATCCTGTTCTGGTATTGGAGCAGACATTTCAGCAGCAATTCCT GCAGTGACCTCTTGGATTAGGTGTGTATCTGGCAATCTTATACAGGATACAAATTTGTCATGTTCTGGTACTCTGTTCAATAGAAAAGTTGAGGCATCTA ATGACCCACAAGCCCTTATGTCAGAAGTTGCTTCCACTGAAAGGTCTGATCTTAATAGTTCAGGGGAAGCTGAAAATAGCTCTGAGATGGACTCTAATGC TTTTACGGGCAATGATCAAGACATGGTTGCATCCTCTGAAAGCACAAGCTCCAGTAACCATTGTGATTTCGACATTGACAAAGTTGTGAGCGTTGATTCA AATAAGGATGTACAGGGCTTATGTTCAGGGTTATCATCTGTTAGCATGTGCAGTCCACTCGAAGATTCATCTTTCATTCCAGATTCAGTCAGATTACATT ATACCCATAACTCAATCAACTCTTCTATAGGGAAAAGTTTGTGGCAAGATAATGAATATTCATATTCGAAAGAACATTCAACCACACCAGCTTTCTGGGA AGACATTGTTGTCGAAGATGTGATAAATATAAATCGCGACCAGCAACATTTTAGCAAAGGAATCAATAATGTATCATCTGGGCTCTGTTCATCTTGTCTG CCTCAGAATGTGAACCAATCAAGCCATCAATTGTGGCCACAAAAACAAGAACAAATTTGTAACCATTATCAGTTGGTTAAACCTTCCGAGTCTTTTAATG AACCCTCAGAGACAGGACATGGGAAGCATGTGGAGAATAAGGATATTACAGTTTCAGACATGGGAGAGAGCAGTATCATATCTAATATTTTGTCTTTGGA ATTGGATGCATGGGAAGATTCCTTAGTTAAGTTGTTGGATGAAAGTGGTAAACCAACTTTACGAAAAGTCCAAGACAAGAGCCAGTCAAGGTTCTCCTTT GCCAGACAAGATAATCTCACGAATGATGCATCTGATTTGGAGCAATCTTTTGGGATTGCTGGGAATGCTCCGAAAGGGAACTTTGCATCTGCTGGTTTAA AGGGAAACAAGGATACTCCCACTGGAAAATACCCACGTGTTTCCCCATCAAGCAATTCTACGCTGTTAGATAAATTTGTTGGAAGTCAGCCTTTTGTGCC TTCTAAATATTCTGCGTCAAATGCTCATGCTTCAAGCCCACTAGGATTTGCAATATCCAGCAGAGTACCTCCAAGGTTTTCACGTGGGAGAGTTGAACCG GATAACAGTTCTGTGAAACATTTACAGCAGTATGCTCCTCCTTCTGGAAATATTAGCAGGATAAGGAATACTGAATTTAAAGATATTCCAGCATGGGGAG TTGGTAGTGGTATGCTGACTGAAAGGCTGGGTAATGCATCTTTTGACCGGAATGACCTGAGGCAAACTTCACTTCCAAAATTTAGTCCCGGTGTAGATGA TGCGAGACTTCAACTGTTAATGCAACAGTCGACGCCTCAGAATTTCGGACTCCCAGATCATGTTGGAAATATACTCCCCCCCCAAAATGACTCACACAGA ACTTCTTCAAGGTTTCTTGATCAATTTCAGTCGAATAGTCCATCTATTATTTACGAACAATTGCATTCTCAACAGTTCAGTAGTACTGTTCTTCCTTCAA ATAACCAGTGGGGTGGTTGGAATGACAAGAGCTTCAGTGGCCGGCGTATGTCAGAAGTATTGAATAATGAGAGGGGGGGATATAACAATTTCATGTCTAG TTAAAGAGTATATATAAAACTTTAAGCACCTGCTTTCTCTGATCTACTAGAACATTGTGGTGATTTTGTTTCAACTGTAATTTCTCTTCAATGCGCTAAT TGGCCATCGGATATCAAGTCTATGGGAATCACATCTGTCTCCAAAATACCCAAGTCTTGATTTGGCTGAAATTGTGTTTTAGTTAGGCCATATAACAGTA CCTTGAGATCACTTTCAAAATCAGTTTCGAATTCAAGTATCCTGAATCACATTCACAACTTTCTTATCAAATAGTCAATGCTAAATGTCAATCACTCTTG TTTGCTTAACTTCACATGCTAGTAGTGGAATCTGGGTTTCTCCACATTATTGTTGGTAGATGCATTGTCTGATGTAATTTGTTAGTTTAACCAGAGGTTG CGGTGGCTGAGAAATCCGGTTATGCCGAGCTTACTGGAGAGGTGGCTCTGGCTGCCTGGGAAAGTGCCTTGGAGCAGTTCCAGTTGGCCTACCTCGACAA GGATCTCTCCTGGATGTCCATCAACTTTTATGTGGAGAATGAATATCTTCTTCCGGAGGAGGACGAGAATGTTTCCAGTTCCATACTCAAGGCATAGCTT GTAGGTTAGCTCGGGGTAGTGATGAAGGTTGAGCATGGATTTCGACCTTGTAATAGTTTAGATTTTGCAACTCTTTTTAGACTATCTATAAAGTTCATTT TTTCGGCTGTTTTGTTGATATATCATGCTACTCCGAGTACCAATTGTCTTGACGACAAACCTAGTAATAATTACAATTAACTTTGAGTGACTCAATCATT ATGATATTTGAATGATCGAATAATTAATTTTTAACCATTTGAGAGGATCTTAATTTGAAATCCTTGCAAGACTTGACATTTAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_41573; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_197879
| Blastp | - |
|---|---|
| Blastx | CCR4-NOT transcription complex subunit 4 from Mus with 40.4% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002474) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443044.1) |
| Pfam | - |
| Rfam | - |
| GO | - |