Ll_transcript_196452

Id TrinityFTRINITY_DN54350_c0_g1_i3
Name TranscriptLl_transcript_196452
SequenceCACTGAAATTTCCATCTAAATGGAGGATTCCGATGGAGTCCTCAACTTCGATTTCGAAGGCGGTCTCGACGCTGCTCCTCCCTCCGCCGCCGCCGCCACC GTCCCCTCCGCTGCCGCCTCATCCGGACCTCTCATCCACCACGATGCCTCTGCTGCCGCTTCCTCCATGGCCAACGGCAGCGCCGTCGGTATAACCCCTC ATTCCGCTGCTGATCACCCCTCTGGCAACATACAAGGGCGGCGGAGCTTCCGGCAGACGGTGTGCCGGCACTGGCTTCGAAGCCTGTGTATGAAAGGAGA CGCGTGCGGGTTCCTTCACCAGTATGATAAGGCGAGGATGCCGGTGTGCCGGTTTTTTCGGCTTTACGGAGAGTGCCGGGAGCAGGATTGTGTTTATAAA CACACCAATGAAGATATCAAGGAGTGTAACATGTACAAGTTAGGATTTTGTCCCAATGGGCCTGATTGCCGATATAGACATGCAAAATCTGCTGGACCTC CACCTCCTGTTGAAGAGGTCCTTCAAAAGATCCAACATTTGTATTCTTACAATTATAATGGTTCTAACAAATTTTTCCAACAAAGGGGTGCTAGCTATAA CCAACAAGTTGAACGATCTCAGTTTCCTCAAGGAGTTAATTCTACAAATCAAGGTGTGACTGCAAAACCCTTAGCAGCAGAGTCAGGTAATGCCCAGCAG CCGCAGCAAGTTCAACAATCGCAGCAGCAGGTCAGTCAGAGCCAAATACAAAGTCCCGCTAATGGTCAGCCCAATCAAGCCAATAGAACAGCAATCCCTT TACCACAAGGAATATCTAGGTCTGTTCAGAGTCTTGTAGTTTTCAATTAGGCTGGGTGAAATCTGTCATTAGTATGCCCTTACAGTTACTTAAATATATA AACGTGGTACATATAACATATAGAACATATTTTTATTTGGGAGATTATGCCAACATTTGCCTTGTGTAGTTAGTTTCTCCCAAGACTATTGCTATCGCTT GGCTGTATACACATATATTTGATGTTGGTTGTTATTGGCTGATCACACACATCAATGTTAGTTGATTTCTTGCATGTTCTTTACCACTAATTGACTTTAA ACTCAATTAGAACAACCTCTGGCTTCTAAGGTCTAATTCCTCTTGGAAATTTGATACCTTGACAAGCTAAGCATCAAGTTCTTAATTACTTACTGTTTAA TAAAATTTACTGTCAGGATATTATTTGTAGTCCATAGTGTAAAAATGTAAAATAAAGTTTGACAATTATTGAAAGTGAGAAGGACGTTTGTATCTCAAAA AGAAAAGGTTGACATGTTAAAGGTAAAACATGTCAGAGCAGCTTCATAACTTTAACAGTATAATTCTCGTTTAGGTTATTACCATATGCTCTCTGTTCAT TTCACTTGTTATCAAGTTATCTTCTATCACCGAGAGAAATATTGTTATAATATCAATCCCCTGTGCCTAGAATGTGAATTTGTATTACCTGCTGTATGGT TCCTGTTACCGAACTAGAGATTACTACATTATCATGTACTGTTCCAGAAGCGAAAAAATAGATATTTTTATGAGGGGTCTGTCCTCAAATCTAGATTTTT TATCCTATACAAACATTGCTTCAGTTGAGGCACTATTCTTTCATAAATGAGTTAGACTGATATACTTCTCCAC BLAST
Tissueflowers
Gene nameLI_gene_41865; 
Additional informationdetails; 

Expression of Ll_transcript_196452

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_196452

Blastp30-kDa cleavage and polyadenylation specificity factor 30 from Arabidopsis with 58.09% of identity
Blastx30-kDa cleavage and polyadenylation specificity factor 30 from Arabidopsis with 56.67% of identity
Eggnogzinc finger(COG5084)
KeggLink to kegg annotations (AT1G30460)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019419266.1)
PfamRNA-binding, Nab2-type zinc finger (PF14608.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;