| Id Trinity | FTRINITY_DN54423_c0_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_238629 |
| Sequence | ATTTGGAATAGTGAGACTAATAACGATAATCTACACTCATGACAGAAGAGACAGACATCCCATCAAGTAATTGTTGGTGACCTGCTATGGTAAATAGTAA TAATCTTTTTTGTTTCCCATTTTCCGGAGGAAATACTGTTCGACCTGAGAACATCTACGTATACTTGTAACATTTCAGCGAATATTTTTTACATACATAA GACTCGAACCGTTAAATGGTAATGATTTGAGCTGGAGTATTGTTAATTATGATTATACTTATTTTGGAGTCATAAAAGTGAAAACTACAAACCCTCTTTT TCCACTTTTCATTTGATCAATTTCTCCATTCTGTTCCTGAAACCTCCTTAGGTCATGGAACAACATTCTCTTCCTCCACCGTCTCAACCACCAACTCGCC GTCTCAAAAGAGGAAGACCTCCAAAACCGAAGCAAAACGATCAAGAGAGTTCTCATGATGCACCAAAAAGGCCTAAATTAAAACGAAGTCGTTTTCAGCA AGGAACTTCAAGTGTTGCTCAACAAGCCTCTGATTTAACATTGATTGAGGCGATCAAAGGTAATGACAAGCTTATTCCTCATGTCGTCAAACTTTGGGTT GAACGCTATGAAATGGAGCCAAAACCTGCGATGGATGAACTCTTGACGATGTTATTTCAGGCATGCGGAGCCAAGGATTACAACAAAGGTGATCTCGTGG ATGAGAATGATGTTGATGATGTTGTAGTTGCTCTGGTCAACTACGCTATAACTGGTGAACTTGAAGAATATCAAAATTCCAAAAAGGAGTTTAAAAAATT CAAAGAGAATCTTAAGTCATTCTGGCATAATTTGGTTTGTGAATGTCAACATGGCCCATTGTTTGATCAGGTTTTATTTGACAAGTGCATGGACTATATT ACTGCACTATCATGCACCCCTCCAAGAGTTTACCGCCAGGTTGCTTCATTGATGGGTCTTCAGCTTGTCACATCATACATAGCTATTGCTAATGTGCTTG GTGGACAAAGAGAGACTACACGTAGACAATTGGATGCTGAAAAAAAGAAAAGAAACGAGAGACCTTCACTAGAGTCACTGAATAAGAGGTTTTCTGATAC TCATGAGAACATAAGATTGTTGGAGGAGATGATGCGCAAAATATTTACTGGGTTATTTGTGCATCGCTACAGAGACATTGACCCAACTATTAGAATGTCA TGCATTGAGTCACTTGGTCTATGGGTTCTGTCATACCCATCACTTTTTCTGCAGGATTTGTATTTGAAATATCTTGGATGGGCATTGAATGACAGAAATG CTGGTGTTAGAAAGACTTCAATAAACGCACTGCAAAATATTTATGAACCAAATGATAATGTACCATCCCTTGGTTTATTTACTGAAAGATTTTCTCGGCG GATGATTGAGCTTGCTGACGACATTGACGTTTCTGTAGCTGTTTGTGCCATAGGGCTTATTAAACAACTACTAAGACATCAACTTATTTCTGAAGATGAC TTGGCTCCTTTGTATGATTTGTTGATGGTTGATCCTCCGGAAATCAGGCTTGCCATTGGAGCACTAGTTTATGATCACTTGATTGCTAAAAAATTTAATA GCTCCAAATCAGCACCAAGAGACAATTCTTCTGAAGTCCATCTTAAGAGAATGTTGCGACTTCTGGAGGAGCTCCCGCGTGATCCAATTTTGAGTATTTA TGTGATTGATGATGTCTGGGACTACATGAAAGCTATGAAGGATTGGAAGTGCATTGTATCCATGCTTCTTGATGAAAACCCATTGATTGAGCTCTCGGAT AGAGATGCATCAAACCTGGTGCAACTCCTGTGTGCATCTGTGAAAAAGGCTGTTGGAGAAAGTATCATTCCTGCTACTGATGCTACTGATGACGGAAAAC AATATCACAACAGAGCCCAAAAAGAAGCATATGAAAGTAATAAACAGGATATAACTGTTGCCTTGATGAAGAGTTACCCATTACTCTTGCGGAAGTTCAT TTCAGATAAAGAAAAGGTGTCATCACTGGTTGAGATTATTTTGTACATGAACCTTGAGCTCTATTCTTTGAAGAGACAGGAGCAGAGTTTCAAAAATATC CTCCAGCTCATTAAAGAAGCATTTTTTAAGCATGGTGACAAGGACACCCTGAGAGCTTGTGTGAAGGCAATTGATTTTTGTTGTGAAGAAAGTCAAGGGG AGTTGCAAGATCTTGCCTGTAATAAATTAAAGGAACTTGAGGATGAACTTATTTCGAAGCTGAAATCTGCAATTAAAGTAGTAGTGGATGGTGGTGATGA ATATTCTCTTCTTGTAAACTCTAAGAGGTTGTATGAGCTCCAATTGATGATATCTGTGCCTATTGATAATAACCTATATGATGACATTGTCATGGTGCTA CGTGGTTTTAGGAATATGGAGGATGAGGTTGTTGGCTTTCTGCTTCTGAACATGTATTTGCACATGGCTTGGGGTCTGCTATCTATTATAAATGAAGAAA TTGTTTATGAAGAATCCTTAGATTCTCTTCTGTATAAGCGCGATACATTGTTACAAGAACTTGAATACTTTTGCAACTTAGGTACTGACAGCATGGAAGG TGGTAAACAAGGAAGTGAATTAGCTTGCAGAGTATGCATCATACTTTCAGAAATATGGTTCTTATTTAGGAGGGAAAATTTCTTCGAGACAGTGTTGGAA AGATTATTATATGAGCCAAATGACTATGTGCTTCGGAAATACTGGAAACTTTGTGAACAACAGCTTAATGTTTCAGAAGAGGAGGAAGATGAAGATGAAG ATACTAATGGAGAGTATTTTCAGGAGACAAATAGATATGTTGTTTTGACTGCTGCTATAAAGGTGGTTGCTTTTGATGCTGTTCCAAAGGAGTATCTTGC TTCTGAGATTATTTCACATTTTGTAATGCATGGGACAAGTGTGGCCGAGATTGTAAAGCATTTGATCACAGTTTTGAAGGAAAAAGATGATGATTTAGCT GCCATTTTACTCGAAGCACTTAAAAAGGCATACAATCGTCATGTTGTGGATATTTCTGGCTGTGAGACTGATTCTGCAGATAGTAACTCTTTATCGGGAT GTAAAGATCTGGCCGCTCAGCTTTCTGGAATATTTATTGGTGCTGACCGGACCAAACATAAGGCAGACATTTTAGAAATTGTCAGGGGAGGTATTGAATA TGCTTTTGTAGATGCTCCCACTCAGTTGTCTTTTCTGGAAGCAGCTGTGATCCATTTTGTTCCAAAACTCCCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_42482; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_238629
| Blastp | Sister-chromatid cohesion protein 3 from Arabidopsis with 62.09% of identity |
|---|---|
| Blastx | Sister-chromatid cohesion protein 3 from Arabidopsis with 61.77% of identity |
| Eggnog | Stromal antigen(COG5537) |
| Kegg | Link to kegg annotations (AT2G47980) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444129.1) |
| Pfam | STAG domain (PF08514.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |