Ll_transcript_236353

• Id Trinity: FTRINITY_DN54434_c3_g1_i1
• Name Transcript: Ll_transcript_236353
• Sequence: CCTCTTCTTCCTCCTCCTCCTCCTCCAAACCCTTACTATTACCCTCCTCCTCCTCCTCCTCCTCCTCCGGGTTACTATTATAACTCAACAAATCCACAAT CTTATTATCACTCTTCTTCTTCTCATCACCCTTTCTATCCTAATCAACACCATCAACGTGGTTGCACCACCTTGACTCCCCCAACTATACCCTATGTTGA CCATCAAACTGCCAAGAAGATAAGGAATAATGTTAATTTGCATAAACATACTCTCTCCCTTCAACTCGATCCACTCAACCCTAATCACCACTTGCTTTCT TTCGTTTTCGACGCCCTCTCTCATGGAAGCATTACTATCTTCTACTTGGCCAAAGAGGAAGAACAATGTAGATTTATTCCACTATACCCTGATGCATTTG AGCCAATCACATTCCCCTTTCAGAAAGGAGCTGGCCAGAAATTTTGTCAGCCTTCAGGAACTGGCATTGACTTGGGTTTCTTTGAGTTGGATGATCTTTC AAAGCCCTCACCTCAGGAAGATGTATTTCCTCTTGTAATATGTGCTGAAACACGTGCCGAAACTGCTTCGGCAGATGAAAATCCTAGCAATTCCATGCTA GATTCATCGCCTCGCATGCAAATAACTCAAGCCGTCTTGGAGAAAAGAAATGGTAGTGATCCTTTCCAGGTAAAAGTAGTCAGGCAGATTCTGTGGATTG ACAATGTTCGTTATGAGCTGAGAGAGCTATATGGAATAGGAGGATCAACAGCAGCAGATTTTGATGATACTGATCCTGGGAAAGAATGTGTAATATGCAT GACTGAACCAAAGGACACCGCTGTCTTACCTTGCCGACACATGTGCATGTGCAGTGAGTGTGCCAAAGCTTTGAGGCTTCAATCAAACAAATGCCCTATT TGCCGCCAAGCTATTGAGGAACTTATAGAGATCAAGATAAGTGAGGGCGACCAGTGACATCTTCCCCCGGATGTGAAGTTGAACAGCATGGTATTTCCGT CGAAGTCTTTCCTATATTTAAAAAAAAAAACTCCCCTTTTCACTCTGCAGTCTGGTACTATATAGCATTTTTCTTCTTTTTTGTAAATTGCAATCGATTA TCTGTTTATAGTTCATATGTAATGAGTTTGAAAGAAAATTAGATCATAAGCACTTTTTTGTGTCATTAAATGTTACTTTTGTGCCGTCTACGTTGTACGG TCGATTGTTTATATTTTGCTTTACTTTTTGTATGTTGTGATATTTGTAGACCTGGTTTGCTTGTTGACAAACCTCTATGTATCATGAAGGTGAAGATTCC TCAATCCTCTCCAATTATGTTTGGAAAGTATTCATATAAGTCATAGTTTTCAACAATCTTTCTTCTCCTTTATGCCTTTTGCTGAAATGGTTCATATAAG TCTATAGTTTTCAACTAATATTTGCATTCAGAACTGTTTATGCAAATCAGAATCTTCAAAGCTTTGACAAGTTTCTGG
• Tissue: flowers
• Gene name: LI_gene_42637;
• Additional information: details;

Expression of Ll_transcript_236353

FPKM

• FPAB: 18.5
• FPNAB: 17.3
• LF1: 10.9
• LF2: 8.1
• LF3: 5.7
• LF4: 7.6
• UF1: 10.2
• UF2: 9.7
• UF3: 5.5
• UF4: 6.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_236353

• Blastp: Probable E3 ubiquitin-protein ligase LUL3 from Arabidopsis with 54.02% of identity
• Blastx: Probable E3 ubiquitin-protein ligase LUL3 from Arabidopsis with 59.25% of identity
• Eggnog: RING finger(ENOG410XRAE)
• Kegg: Link to kegg annotations (AT5G19080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437198.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13920.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;