| Id Trinity | FTRINITY_DN54471_c2_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_238697 |
| Sequence | TTAGAAATCACTTGCTCCATGCATAGCAATAATTGCCTTGATTAATAAATAAAAACAAGTTGAAAGTTAAAATATCAACATCAGTGCATCTGAGTTTCTG TGGTTTTCCTTCCATATAAGTACATGATTTTGGATGCTAAATCAATCCACACATAATAACCCCACATGTGCAACTACTTCATCCTTTTGAACTCACCATA CAAGCAAGATGAGAAGCATTTCAAAGACAACATGCTTCATTTTCATTCTTATAGTAGTACTAACAGCAGTTCAAGTTGAAAGCCGTGTCCTTGGCATAAG TGCTTCTGAATTGGTTTATGATGGAGTTGATGATGTTAAAAATGAAAGTTCTAATCTTTACCTCAAAGGGAGTGAGCCCTCTGGAAAATACTGTGAGCAA ATGTATGGTTTCTTGCCATGTTCAACTAACATTTTGGGTCATCTCTTTCTGATTTTGGTGTATGAGTATTTGTTATTCCATGGAGAGTCATACTTGGCTG CTGGTGGTGAACAAGTGTTCAAGATTCTTGGCCCTGGCATTTTTGGTGCTAGTGCCTTTGATATCCTTGGTGCCCTTCCTGAGTCTCTAATTCTTCTTGT TACTGGACTTAACAGTGATAAAGAAAGTGCACAACACTATGCATCCAATGGAGTTGGCTTGTTGGCTGGATCTTCCATTTTGCTTTTGACAGTAGTTTGG GGAACATGTGTTATCATTGGTTGTGAAAAGTTGAAAGATGACCCTAAATCTAGTGGGTCTAACACCTCCAATTCATCAAATGGAAGGATAAAAGAAGCAT TGACTGGTTCTGGCATTATTGTGGATATAGATACTGTAAAGATGTCAAGAATGATGGTTTTCTCAGTTATACCACTCATCATAATGCAGATTCCAACTTC ATTCAAGCTATCTCCCACACATTGTGCTGTCGCCTTGATGGTTTCTCTTATCGTCGCCGTCATTTTTCTCATCTCCTACTTCATATATCAGGTTTTCAAA CCTCACATAGAGAAGACAAGACTAGAATATATTAAACATGACGATTTAATATTAAGGATATTTCAGCATGTTGAAAAGCAAACTCTTCAAAAGATCCTCA CTGAGGATGGAACCCCTAATGTTACAGCCATAAGTGGACTATATCATGAAATAAGCCGACACGGGGACAAGGACTTGTTGGCTTCTGAAATTAAAGAGCT GCTGCTTCAGAACAAAGAAAATGGAGCAAATATCAAAGAGGAACAAATAGCAGGCATGTTAAGAATTTTCGACCGAAATGGCGACCAAGTTATAACGAAG GAAGAATTTGTGGTAGGCTTGACAGAATATATTAACCAAACAAAGCATGCTCTGGACAGGAAGTACCTCCCAAAAGAATCAATGAACAACTTGTATCAGG TTTTTATCAAGCCATGGATTGAACATACCAGGAGAGAACGTGAATTGAAGGGACATCTTATATCTGAAGTGTTAAGGCATGCTCAGAACGATATGGTTGG AAGTCTTTGTAAAGATGATGGTACACCTGATGAAGCTACAATAAGAAGGTTATTTGAGCAAGTTGATAGCAATGGAGATAATCACGTCTCAAAATCAGAG TTAAAAAAATTAGTCAAGGACATTCATCTTGGTAAGGTTGCAGATTCAGAGGAGGCAGTTGCAAAAATCGTTCACGAACTTGACCTTAACAGAGATGATG AAATCAGTGAGGATGAATTTGTTGTTGGATTTTCAAAATGGATAAACAGAAATTCCAGTCAAGCTCCCCACTTAATTGCAATGCCTCATGAAAATCATCA AGTACTTGCCCTATTCCTTCACTCAAATAAGTAACTCAATTTCTATTCTGCTTCACTTTTTAAGGGTCACATATACACTGAATAACAGAAACTAACATGA AGTACTGAAATGAATGTGTTAGACCTGGGAAGAAGTTGAAGAAGTGATGGAAGATAATCAAATCAAAGGAATAAATGCTTGGTTGAGCGCTTTAGGATAT GTGATGCTGGGAATTACTATGTTATCTCTTCTTGCAGAGCCCTTAATAGACAGTGTCGAAAACTTCTCTGAAGAAGCCGGAATTTCATCTTTTTTCATCT CATTTATTATAGTCCCCATTGCTACAAATTTTAGAGAAGCAACCTCAGCTATCAAAGAAGCTAGTCATAAGAAGAGAAGAAACACTTCTCAAACAATTTA TGAGATTTATGGATCAGTTTTCATGAACAATATTCTTGGCTTTGTGGTGATCTCCAGTCTAATATATATGAGAGATATCACTTGGGAATTCTCAGCTGAC GCATTGGTTGTAGCAATTGTATGTGCTGCGATGGGCCTCACTGCGAGTTTTCGCTCCACTTTCCCTCTATGGACATCTGTTCCTGCATATGCCTTGTACC TAGCATCATTAGTTTTGGTTTATACTCTTAAAGATATTCTGCATTATGTTTAGTGACTGAGTTTTGAGCAAGCAGAACAGATTGACTGATAAGCTGTGAA TGCAAATAAAATTGTGTCTGTAATTGATAGACGCATTTGGCCGACCTATTGAAGCAGTTAATCATAATTAATTAATAACTTAATTGTATTGAAGAACTCA TGATTAATAACTTACCTGTATGTCAACAAGGAAAACTCGGCTAAAAACAAGTCCAGTAATTTCTTGGTTGGTTTTGGCTCTCCTTGTGGCTTTTTCCATG CATCAGCCTGGTGAGTGAGGACTTCAGACAGGGCTGGTTGGCCTTTTCAACTAGACTATGAATGCAATAAAAAGTGGCAGGGATTCCACCTGCTTCAAAG ACTACCCCAGAAGCCATACCCTCTGAAGGAGTAATTCCAAGATATCCTTATACTCAAATTCACGATAGAATGAAAATGCATTCGGGAATATAAATCTCCG ACTTAGGGTGTTCATTAGTAGAATCAAATATCAATAAGGATCTTTGTATGTAAAGGAAAACAAATTGCTCCTTAAATGATGCTCAACATTCCTTCCCCAT AGACATAAATGCCACAAACAAAGAACGAGAGGCTTGAGTTATTTCTCCATTTGGGTGCCCCAAATATCTGGTTTCAGTTAAGGAAGTAAAACATATCCCC ATGATGATGCAACCAGAGTCCAGACACACGAAAATATTATTTAATGCATGCATGAATTAGCTTATCTAGTGTCTATGATAGATTATATTTAAAATGCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_42925; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_238697
| Blastp | Sodium/calcium exchanger NCL from Arabidopsis with 37.6% of identity |
|---|---|
| Blastx | Sodium/calcium exchanger NCL2 from Oryza sativa with 36.28% of identity |
| Eggnog | Calcium-binding EF hand family protein(ENOG410ZVKW) |
| Kegg | Link to kegg annotations (AT1G53210) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449181.1) |
| Pfam | Sodium/calcium exchanger protein (PF01699.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |