| Id Trinity | FTRINITY_DN54471_c3_g6_i4 |
|---|---|
| Name Transcript | Ll_transcript_238714 |
| Sequence | TTCAAATGTTGAGTTGTTTTTGAAGTTAAAAAGAAAAGCCCATTAAAACATAAACCCTAATTCATAGGGAATAGTGATTAGTCAGAAGTGACAATGTTTT CTGTTGGAACCAACAAGAAGAAGAGCAATGCGAGAGTCCTCGACAACCACGATTCTCCGATCACTCCTCACCGTATCTCCGTCGATGAAACCGCCCTCCA CAATAGACCTTCCACCGGCACCCCCGCTCCATGGGCTCCTAGCTTATCCATTCTTGCCCGGGTTAATCAGGTCAACAGAACTCGAAAAGATGACACAACC GATTCAGTTAATCCTGTTTTTGTTGCTGAGTTTCCCCAACTAGTTCGCGACGAGCAAGCCTCTTTGCTCCGTAAGCGTGTTTCTGCTGAAGATTACACAT CTGGTGGGATTGACAAGAGTACATCACTGGCTTGGATTATTTGTGGAAACAAGGTCTTCCTTTGGAGTTATTTGTCGCCTGCTTCTCTGATGAAATGTGT TGTTCTTGAAATTCCTTTTGATACTTCGGATGATGGAGATGTTGACAGGAATGATGCTGGTAGCTGGTTGCTTTGTGTTGTTAATTGTGACAGCGCATCC ATGGGAACCAATAAAGTTGCAAGACATTGCAACTCAGCTGCTGTTGTTATGTGCAATAGAAAAACTAGGGCTCTTATATACTGGCCTGACATTTATTCTC AATCACACAATGCTCCAGTCACTAGTCTTGCATCTTCTGATGAGTTGGAGGCTCTTTTGACACCTGATAGGAAGACTTCCTTCAACAGGCATCGGGGACA GAGTAAGCTACGCAGTGGTGTGAATGCATTGCCTCTGTTTAATTCTTTGATTGCTTCTCCGGTCCCGGATTGCAATTTTGTATGTGTTGCCCTTGCATGT AGCTCGAATGGTGAACTTTGGAAGTTTCACTGCTTTCCTTCTGGCATTCATCGGACGAAAGTATATGAAAATATTGTGCATTTCCCTCACCAAGGGGTCG GTGATTCAGGTCAATTTGTGAGCAATAAGGGGTATCCAAAGTCATTGACATGGTGTTCTCCACATTATTCTACTAAAGAATCAAATCGACAATTTTTGGT ATTGACTGACCGAGGGATACAGTGTTTTAGGGTAGAGTTTAATTCTGATGTTCATGTTTCAAAGCTTTGGTCCCAGGAGATTGTTGGAACAGATGCTGAG GTTGGCATTAAAAAGGATCTTGCTGGTCAAAAGGAAATCTGGCTTCTTGATGTGATGGTAGATGATCGTTGTAAAGTGTTTACCGTTCTTTTTGCAATCT TTTGTAAGGACCGGATTAGCAGTTCAAGCTACTTGCAGTATTCTCTGCTAACCATGCAATATAAATCAGGGTTGGGTGGAGAGAATACAAATGACAGGGT TTTGGAGAAAAAAGCTCCTATCGAAGTGATAATCCCAAAAGCTAGAGTTGAAGATAAAGATTTTTTGTTTTCCATGAGGCTTCGTGTAGGGGGAAAACCT TCAGGTTCTACACTTGTAATATCTGGGGATGGAACTGCAACTGTCTCCCATTATTATAGAAACTGTACTCGACTCTACCAATTTGATTTACCCTATGATG CTGGAAAAGTACTAGATGCTTCAGTCCTTCCTTCCGCAGATGATTATGAAGAAGGTGCATGGGTTGTGTTAACAGAGAAAGCAGGAATATGGGCAATACC TGAGACGGCTGTCATACTTGGTGGAGTTGAACCTCCTGAGCGGAGCTTATCACGCAAAGGCAGCTCAAATGAAAGATCCACACAAGAAGAGATACGAAAT CTTACATTTGCTGGTAATTTTGCTCCTAGAAGGGCTAGTTCTGAAGCATGGGGTGCTGGAGATAGACAAAGGGCAGGTTTGAGTGGTATCACACGTCGAA CTGCACAAGATGAAGAATCAGAAGCTTTATTGAATCATATTTTCAACGAATTTTTATCATCTGGGCAACTTGACTGGTCACTGGAGAAGCTAGAAACTTC TGGTTCATTTGAAAGGGATGGAGAAACAAATGTTTTTGTGAGAATGAGCAAATCGATCATTGACACTTTAGCTAAACACTGGACAACAACGAGAGGCGCT GAGATTTTGGCCATGGCTGCTGTTTCCACCCAACTCTTAGAAAAGCAGCAGAAGCATCAAAAGTTCCTTCACTTTCTTGCTTTGTCCAAATGCCATGAGG AGCTGTGTTCTAGGCAGAGACATGCCTTGCAAATTATCTTGGAACATGGTGAAAAGTTATCTGCAATGACTCAGCTTAGGGAACTGCAAAATCTGATTAG CCAGAGTCGTTCTACTAGTGTTGGCTACTCCAATTCGAGTTTGGGTATTCAGATGTCAGGTGCCCTTTGGGACATGATACAGTTAGTTGGTGAGAGAGCT CGCCGCAATACTGTCCTTCTGATGGATAGGGATAACGCTGAAGTGTTCTACAGTAAGGTTTCTGATCTTGAGGATTTCTTTTACTGCTTAGATGCAGAGT TAGAATATATTATAAGCCCAGAGCACCCTTTTGGGATCCAGATCCAGAGGGCGTGTGAACTCTCAAATGCATGTGTTGCCATAATTAGGACATGCTTCAA CTATAAGAATGAGAATCATTTATGGTATCCACCTCCTGAGGGTTTAACCTCTTGGTATTGTCAACATGTTGTACGTAAGGGGATTTGGAGTGTTGCTTCT ATTCTGCTTCAGTTGTTAAATGGAAATTCTGGGCTTGATAAATCAGCAAAATTGGATTTGTATAATCATTTAGAAGCACTAGGTGATGTCCTACTTGAGG CATATTCTGGTGCTATTACAGCTAAAATTGAGTGTGGAGAAGAACACACTGGTCTACTAAATGAATACTGGGTGAGGCGTGATGAGCTTCTTGAATCCCT TTATCAACAAGTCAAAGAATTTGAAGATACCCAAAAGGACTCGATTGAAGGAGCTGAAGAACAGAGTGAAGAAGCAATTATGAAAGTTACGTCACATCTG CTATCAATCGCTAAACGACATGGATGTTACAAAGTTATGTGGACAATATGCTGTGATCTAAATGACTCAGAATTACTCAGGAACATTATGCGTGAAAGCT TGGGACCCAATGGGGGTTTTAGCAACTATGTCTTTAAGAAACTAATTGAAAGTAGACAATTTTCCGAGCTTTTAAGGCTAGGGGAAGAATTTCCAGAAGA ACTATCCATTTTCCTCACGGAACAACCAGATCTTCTTTGGCTTCATGATTTGTTCCTTCATCAATTTTCGTCTGCTTCAGATACACTTCATGCATTGGCT CTCACTCAAAACTTGCAGTCTACCTCAGTTGCTGAAGGAGAAGAGGACTATATTAAGTCGAAGCTAAAATTGGTGGACAGAAAGAAGCTTTTGTATCTCT CCAAGATAGCTGCCTTCGCCGCTGGTAAGGATGCTGGTATTCAGGTGAAGGTGGATCGAATTGAGGCTGATTTGAAGATTCTAAAATTACAGGAAGAGGT AATGAAGTGTCTCCATTCCATTGAAGATAAGGAACATGTTGAACATCAGCTGCTTCATCCAGAAGACTTGATCAAACTGTGCCTGGAAGGTGAAGAGCGG AAACTCTCATTGTGGGCCTTTGACGTGTTTGCATGGACCAGTTCCTCGTTCCGTAAGGTCCACTTAAAGCTTTTAGAGGACTGCTGGAAGAACGCTGCCT CTCATGATGATTGGAGCACATTACAAAATTCTTACACAGTTGGAGGATGGAGTGATGACGAAACCCAGCAAAACTTGAAAAATACTGTACTTTTCCAGGC TTCAAGCAGGTGTTATGGATTGCGAGCTGAAACCTTTGAAGAAGGGTTTGATCAAGTATTGCCCTTGAGGCAAGAAAACTTGGAGGATAGTCCTATTCTG AATGATATGAGTTCTTCAGTTGAAACAATATTGATGCAGCACAAGGATTTTGCAGATGCAGGCAAACTAATGTTATTGGCAGTGATGTTAGGTAGTGAGC GTGGTATGAAACTCGAAGGAGGGCCTTCCCCTATGGAATGATAGTGTGCTAAAAAATCATTCCTATCCATAATACACTAGCATGACATGTGATGCAGATA TATAGTGCTCATTATTCGTTATTCTCTGATGTGTTGCATTCCTTCACCCAGGATAATATCGTTTGGGTCCTTTATAGAAATTGTAGCTTTTACTAGTATT GACGAGACTTGTTTAACACGTCTATCATGAGATAAAAATACCACACATATATATATATATATATATATATATATATACATGGGTGACACGTTCCATGTCA TTTGTGTAACAAAGACAAGCAAGAAGGCTTCCACTCTAAAGTCACAGTTTTTATGACCACAAATTGACACATTAGATTCAAGAGAACATTTGGTATGTAG TTCAATTCCACTAATCATTAGTCTCTAAGTTGTTAAGCTACCAAGGCAGTAACTTTTATGACCATGAAAAGAATAGTGTCAAATTCGGTGATCACTTTGT AGCAGTAATCAATTAAAGGAGGTTTTGTATGTATATGGACCTCTCTCACCCAAAATAATAATTTGGATGTTATAATAAAAGGCAAATTAAGATATGTTAC ATCTTAGAGTGTACTAATTTCATTTCATTTAAGATGTGCTTTTGGTTGGACAAAAAACTCATAAATTGAACATGCATCAGAGCCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_42933; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_238714
| Blastp | Nuclear pore complex protein NUP133 from Arabidopsis with 54.47% of identity |
|---|---|
| Blastx | Nuclear pore complex protein NUP133 from Arabidopsis with 54.47% of identity |
| Eggnog | Non-repetitive/WGA-negative nucleoporin C-terminal(ENOG410ZVJJ) |
| Kegg | Link to kegg annotations (AT2G05120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460731.1) |
| Pfam | Nup133 N terminal like (PF08801.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |