| Id Trinity | FTRINITY_DN54612_c4_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_483 |
| Sequence | TATAAATTAAAGAAAATTAATTGAGAATAACATATTATGTTTTCTTATTTAGAAAATTTGGAGGATTTTTTTGTATGAAATTTGAGAAAGTCAACTTTGA TATCTGAATTATCATCCTCTAATAACACCAAATCTTCAATCAATTGAGCAAAGTAGTGATGATGAAACTCTTCGATGCACACTGTCATTTACAGGACCCA AGAATCTTAAGCAAAACACCGAATCTTATTAAAACTGCTCAAAATTCAGGTGTTGTTCATTTCGTTGTTAATGGAGTTTGTGAACAAGATTGGCATTTAG TTAAGGATTTGGCTCAAACTTACCCTTCTATCATTCCTTCCTTCGGTCTTCATCCTTGGTATGTTGCAGATAGGAGTCCTAATTGGTTTAAGACATTGAA AGAGTATCTTGATTCTACTCCCTCTGCTGCTGTTGGAGAGATTGGAGTGGACAAAGGATCACATGGAAGGACTATTGATTTTTCCGAGCAGGTTGGCGTA TTGAAGCAGCAGCTTGAACTTGCAAAAGATTTAAACAAGCCAGCATCTGTACACTGTGTTCGTGCTTTTGGTGACCTTCTTGAGCTAATGAAGTATGAAT ATCTAATCTCCCTATTTTGTTTCAATTGTTACTTGAAGAATTGTTCATGAATAATGATCTGAATTTGTAAAAAAATTGAGATGTAAACATTTCTTTTGGA AATGTAGAACAAATATCGAGCATTCTTCCAACAACTTATGCTCTTAGAAGAGTTGGTGCTTGACATGGTAATATAGCAATATCCACCTTCGAGAGTTTGT CATTTCCCAATATTGAGTTCATCTTACTCATTTATACATTCCATCCTTAGTTTGTTCCATAAAACTCCTTCGTACTGGTGTCCTTTTCTCTCCTTAAAAT TATTTTGCCTATAGCTATGGTCTCTCCTATTTTCTTCGCGGAGACAAAACTTGATTGGCTATTAAGAAAATCTTGGCAATTGTGAAAAGGTCATATTTTA AACTGAGTTGCTATATCCTTATTTTTTGTCCTGATTTTTAGGGGACTAAGCATTTGTTTCTGTTGTTGGAATTCAAGCGTTGAGAGTGTGAATGAAAGTT GCATATTTAATAGGAATGGACACGGGGAGGACTAGGTATAGTGAAATGACCTATGAACCTAATGTCTAGAGGGTTTGGGTTGGACATATCATCACTGTTG GATCCACTGGTGTGGTTCCTTTGCAAAGTCCATTGAAATTGATCTCCATGGTATTGTTAGACTAACCCCTTACTGAGCAAGTAGTATTACAGCCGGTTGT TCAGATTGGTTGGATGAGTATTGGCAAAACACTGGTTGATAAATGGTGGTATGAGCAGGTGGTCAAACCTGATGACTAGCTGTAACACGTGGAGGCATGC CTCAGTGAATAGTCAATCGCATAAACGTATGACCTGGCTCTTGGAAAAAGGAAGGCCTGATTAGTGGCCTGGTTCATGTGACGGTCGTCGGTCTGTAACA CTGATCAAGATGTGGCCCAGTTTGTTGAAGAGTGGTAATCATTGGCATTGGAGATTCATTGCTTTTGGAAAACATGGGATTGGTGCGCTGGGATTCCCCC TGAACTTAATAGTCAGTGGCATGTTAAAAATATAAAACCAATCTTGAGATTTCTCTTAATGGCTTAAGCTCTTAGAATAGTTAGTCCTTCACACTTCCTG CAGTAGTGATGCTATGAAAAAAGGAAATACCTATTTATATGGATGTATTCCATATTTTACTGCCGGTTGTAACAATCTGTTTTCACTAGATCTGAATTTT TAAACTTGAGATTTGTTGAATGGAGCAGTCTAGAAGTATAAATATTTATTCAGCCAATTGTCCTTTCAACATTAGTTAAGTCAGGTCACGTGTCCCGTTT CTGTAAGCTTTTTCAAGTGTTCAAGTCTATTAAATGATAGAGGGAAGGCTTCCGTTCTTCCTTGCAAGAAATGGAATCATGATTTCTTTTAGTTGTTTAT TTGTTTCCATAAACTGTTTTGAATTGCTGTCAAATTTAGTTCCTACGCAGTATCGAGGACGAGTTTTTTCCGGCTATTGTAGAATTTGACATTAATTTAG TAATCCCTATTCGGCATCCTACACATTCCCTCCTACATTTATCTTATACTTAACTCATAACAAAAATGGTGAACTGCTTGTATTTTTATTAGGGAAATCA GTAATCTAAGACTTGGTCTCATCTTATAAAGAAATAAACCACATTTCAACTGCTTGTATTTTTTTCTCGTCATGAATGGTTTAAATTTGGAAAATATGAG TCTGTGTTCTTCGGTTTGTTTCAGATAATGTTATCGCCTCCGGAAGACATTGTGAAGTAGGGCAAGAGTCTAGATAGGGTTCTCCCAAGGGGTGGAGAAG GATTGAGAGAGACATGAATCAAACACAGCCAATAGAGTGGTTGTTTTGGTATGACAAACCTGGAAAGAAGAAAATTCTTACTGATCCTACTTATGGATTT AAGATTCAGGAAATTGGTCTGCTATACTACTGCTGAGGGTTTAGCCTATAATATGGTGCAAGCTAAGAACTTTCAAGTTAGACATGACTTGCAGACTACA TTTATTGCCAATTCTTAGTTACAATTATTATACTTAAACTTCCTCGGCACAACTTACTAGAAAGCAAGTTACAAGAAACTGCGAAAATGTACTCCTTGGC TCTTACCACTAACCCAAACCTATTAAGATTCCTTGGTACATAGAAATAACTAGAATTCTTAAAGCATAAACATGGCCTGAAATACTACCCATAACAAGAA GCTATGAAAGTTTTAGAAATTATAAAAAAAGAACCTGCTCATAAAATGTGTAGGATACCTTGGCTCCACGCAAGGTAAGGTTACGTACATCTACCCTTCC CAGACCCCACTAAGTAGAAGCCTCATACACTAACTTGCGAGAGTAGTTAGTAGTTACAATTTAGTTATATAGAAGAATAATTTGGCTCAGAGGCTTACTT CCTGATTATTTTCATAATTGGTCATTTTTGGTTAACATGCTTGGTTAGATTCTCATTATCCAATGGAATGCCATGGAATTAGTGTTATATTGATATTGAT GTTTTTATTGAGCAATCCGAAGTGGCATCTTCAAAATTGGCCGCCTTAAAATTTTCAACATATCCAGGTCTGTGGGACCTTTTCCTGCTGGTGTCATTCT TCATTCTTATTTGGGTTCTGCTGAGATGGTTCCTGAATTTTCCAAGCTTGGGGCTTATTTTTCCTTCTCAGGGTTTCTTATGTCACTAAAAGCAAGCAAG GCAAAGAGAATGCTGAAGATGGTCCCTTCTGATAGGATTTTGTTGGAGACTGATGCTCCTGATGCACTACCAACTTCAAACATAGATTCTCTTTTTTTTG TTGAAGGAGATACTTCTCTCCCCAAAGAGCTTCATGACCAAAGAACTTCATCCTCAACTTCTACTTCATTCAGTAATTCATCCCAAGTCGTGACAGATGC TTCGATGTTGTCAAAGGAAACTCTCAATCATCCGGCTAACATTCGTAGTGTACTTGATTATGTTGCATCTATGCTGGAGATTACCAAAGAAGAACTTGCT GAATTAAGCTACCAGAATGCTGTTCGCTTATTCTCCTATGAAGGTTCCAAAGTACTTCAAAAGTAAACAAAATATCAGGTTCTTTCTTGTAAGAAATTAT GATTCCTTACTAGGCAAAATTTATTTGGAAAGTAACTTTCAGGATATTGAAGCAGATAGATTGGATGATAGTTTGCCTGTTTTCTAAAGTTAATTGTATC AATTGTTTCTGAGCATATAATGGTCATGTTATTTATCATCAGTTTTATTAGGAAAGGAATATGATAGATATGATATTTGGTTATTTAGATTTAATTAAAT AGTTGATAATATATTGATATTTCTACAATGTTCTAGAGTTGTAAGATTATGACACTTGTAGGGTCATCATCGTATCCTATTGTCTTCCTTCTATTTAAAT ATGGTATTCTTCATCCATAAGACAATCAATGAAAAATGAAGAACTTTTATTATCTTTTTAAAAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_44222; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_483
| Blastp | Uncharacterized metal-dependent hydrolase YcfH from Escherichia with 26.47% of identity |
|---|---|
| Blastx | Uncharacterized metal-dependent hydrolase YabD from Bacillus with 27.33% of identity |
| Eggnog | tatd family(COG0084) |
| Kegg | Link to kegg annotations (JW1086) |
| CantataDB | Link to cantataDB annotations (CNT0000065) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442900.1) |
| Pfam | TatD related DNase (PF01026.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |