Ll_transcript_1058

Id TrinityFTRINITY_DN54636_c0_g2_i10
Name TranscriptLl_transcript_1058
SequenceTTTATCTTTGTTGTGATGCATTGGGTCACGTTACCTCACTATGTCGTGTATGTTTGACACAACATAAAAGTATAAATTCACTCCTTCATCCAATTCCTGC AACTCACACATTTAATTAAGCGATTATCACTGTCATTGGTTTACGTCAAAGTAGTAGCAGAAGATTACGAACATGGTGGTCGATTTTGATTCAACCACTC GCAGAGTCGAGGTTGATAATCGCATTCCCCTCCACTATTATTATCGAATTGCCGATAATCTCCTCAAACAGGCAACTATCTATCGCGAGGAGAAAAACAT AGTTGACTTGTATATCATACTCATTAGATATTTAAGTTTGGTTTCTGAAACTATACCATATCATCGAGATTACCAAGTTTCACTTCCCAAGGGAAGAGCT GCACACAAAAAGAGATCACTAGCTGTTTTGGATGAGGTGGAATCTTTGAAGCCCGAGTTTAAACGCCGGTGGGAAAAATTGAATGACTCATGGGGAAAAG CTTCATTCCCTGAAGGTAATGGCTTCAATAAGGCTTTGGAGAGTTCAACGGGTTCATCTTTGGAACACCCTTCTGTAAATAAAAGCTATACCTTGAGCAT GGATTTTAAACAGCCTGTCAGATTGGGTTCACACCCTTCATGGAAATATAACAACAATATGTTAACTTCAAATTCCATGCCCATTGACAAGCAGTTTCAG AAACTATCTGTTGGTCTACCTCCTCCAAAGAAGGAGACTTTGTCCAGACACTCATTTTTGGGGCCAAATGGTCTTCAGGGCCAATGGCTTGGACCAAGTA CGGAAATAAAGGTTCAATATCCAAGCAGTAATGATCTGATACTTGACAAGGATTCAAGCCTTAATCAGGCTGGGCAATATGAACTTGTGGCAGTTAAAGA TGGTGATCAAGGACCAGTTACTTCCACACTGGAGTCAATTCTCTCCTTGGATGATGGTCGATGGTTGCGTCCTGCTGTCGAGTCCTGCTCTCCTGTTTTA ACTGAATTAAGGGAGGACCCTTTCCAGTTGCTCAACATCAAGCAACCTCTGCCTCCTCCTGTTCTTGCTCAGGTGTACCCGGAACATGCCCCTATCCCCC CTTCAAAAGTTGCAGATCCACGGCCAGGACCAGCTAAATCTTCTCAGGATTCTGGAGTTGGTCCCACTACATATCAACACCTACATATTCCTATCAAAAT GATGGAAGATTTTTTGAGACTGGCTTCGGGAAACACACGGAAGAACTTAGAGACATGTGGTGTTCTTGCAGGGTCCCTGAAAAACAGGGTTTTCCATATC ACTACACTTATAATCCCAAAGCAGGAATCAACGTCAGACTCGTGCCAAACATTGAATGAAGAAGAAATATTTGAAATACAAGACAGTTTATCACTTTTTC CTTTAGGTTGGATACATACACACCCATCACAGACTTGTTTCATGTCATCTGTGGATCTGCACACGCATTACTCATACCAGATCATGTTACCGGAGGCAGT TGCAATTGTCATGGCCCCTACAGATACAGAAAGTCCACACGGCATATTTCATCTGTCTGATCCAGGTGGCGTGTCTGTCATTCGTAATTGTCAACAACGT GGATTTCATCCCCATGAGGAGCCTTCGGATGGAAGTCAAATATATGAGCATTGTTCTCATGTCTATATGAATGCTAACTTGAAGTTTGATGTTGTTGACC TGAGAGAGAGATGATTGATCATGAGTGGCCTCTCTGAGGAATGTCTCTTCATGGATTACAGGTATAGAATGATATTCCGCGTGTTCTCTACCAGCCTACC TGTGAATTTTTTTGTATTTATGGAACTATGAAATAGAGAATACCGATGGCCGATCCGGTGAATTTGTATTATACCGGTAAATCTGTGCAAAGATAGTTGT GTAAGTTTAGTAATACTTGATGCATGAGGAACATAACGAAATTACTTCGACGTGGTTTATAACATTCTTTCTCCCTTGACAGAAAACTCATACCGTCAAT TCATATGCTAATGATTGTTACTGGCAGGATTGAACTAAATTGCACAACAGGTTCTGGCTTTTATTCTTGCTGGTGACTATTGGTTGTGTACTCTTAGTTG TGAAACATTATTCACCTTTTAAGCTGAAAAAGAAAAGTAGTTATCACGAAGGTATCACTATTAAATGATCCATTAGTTTAGAGTATTGAAAGCATCTTCC TGAATACAAAGCTACAGTTTTATCTGTTGCCTTTTTACTACAGGAAATAGCCAATAACAATCTCGAGTACATTTTGTTCCATCCACTAGAACCATGCATC TCTGTACAGTTGCAAAATCTTGGATTTTCTTATTTCAGTCTGTTTCCTTTCATGAGTGGCTTTACCTGGCTTCTTAATCCCCACTGAGTGTGACCCTCTT GCACTAGGCCATCCTTTAAATAGTTTTATCCCTGATTTTTAGCCACTAAT BLAST
Tissueflowers
Gene nameLI_gene_44459; 
Additional informationdetails; 

Expression of Ll_transcript_1058

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_1058

BlastpAMSH-like ubiquitin thioesterase 3 from Arabidopsis with 63.67% of identity
BlastxAMSH-like ubiquitin thioesterase 3 from Arabidopsis with 63.67% of identity
EggnogComponent of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(COG1310)
KeggLink to kegg annotations (AT4G16144)
CantataDBLink to cantataDB annotations (CNT0000606)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019455986.1)
PfamUSP8 dimerisation domain (PF08969.10)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;