| Id Trinity | FTRINITY_DN54638_c0_g4_i3 |
|---|---|
| Name Transcript | Ll_transcript_2354 |
| Sequence | AGTTGTGGAAGAATATGTACACAAGCATTTCCACGAGTGGTTTAAAGAATATGTAAGAAAATATATGTATATATATATATATATATACACACATATATAT ATATAATAACTCTTTGAAGAAAAATAATGTTTGGTCTATCAAAGTAAAATACAAATATATTATCAATGAGTAGCCTATTCAGATTTTGTCACAGTTCTGT GAAATCTATTCCAAAAAAAGAAAAGAAGATAGAAAGTGTTGATTATATGGAAAATGGGTCAGAAGAGAAAGAGAAGAATATGGGGTTGAAATTAAAGGAG ACTTTTTTTATATCTCATGGATCACCAACTCTTGCCATAGATGAATCAATTCCAGCATGGAAGTTCTTGAATTCATGGAAGGAGGTGTTTCCACAGAGAC CCTCTTCCATTCTTGTCATTTCTGGCCATTGGGACACCAATTTCCCAACGGTCAACGTTGTTGACCAAAATGAAACCATTCATGACTTCTATGGTTTCCC TAGAGCCATGTACAAGGTTTGCACTTTCTCATCTCTACATAAATAATTAATATATTGGATTTTTACCTTTTCTAAAGGTTCTTTTTTTCTTATACTTATA TTCATCTTCTTGAATTCTTTCATTTTAAGAATTTTTGCAATTACATCTCTTATACTTATTTGTGCAAATACCTCGACAATTCCCACCCTTAATATGTAAA GCCCAATATGATATCTTGAGTTGGTACGGAAATGGGATCCCTAATAATCGGAAATAAGAGTTTCCAACGAGAAAACATAAGTAAATGAGCTTTTGTTGAG CCTCCAAGGATCAAGGCACATGAGCATCCATTTGATCCCCACCTATGTAGCATGGATACTGTATCGATATAATCGTCATTGTGAAATTCCTAATAAAGAA TATATTTATTAGATATCAATCAATACAAAATGAAAATCATGTTGCCAACTTATTATGGATAAATAAGAATAATATTTATCTGGTTTAATCATGATCAACA CCTGCATTTCTTATTCATTCTCTATGTAATAAACGTGCTTTATCTTTTTTTTCTCTCTTTTACTTGTTCCATGTGTTACCAGCTCAAATATCCAGCACCA GGGGCACCAAACTTAGCAAAAAGGGTAAAAGAGCTATTACTAGCATCTGGGTTGAACCATATAGATGAAGAGAAAAAACGTGGGCTTGACCATGGTGCAT GGGTGCCTCTCATGTTGATGTACCCAGAGGCAGATATCCCAGTGTGTCAACTCTCTCTTTCATCCAAAAGAGGTGCTACTTATCACTACAACATGGGAAA AGCATTAGCACCTCTTAAGGATGAAGGTGTTCTAATCATTGGGTCTGGCAGTGCCACCCATAATCTCAGTACAATTGCACCTCGTACTACTCCTCCTGCT CCATGGGCTTTAGCATTTATGTCTTGGTTAAAGGATTCTCTTCTTCATGGAAGGTATATATCCATTTCCTTTCTTTTCCCATATTTATATCGAAATCGTA GACATTTCGCAATAGTCGTCGTCTCTGTGTTAGTCATGTAACTTTATTAGATAGTTTTGGATATTCATAATCATATTCACATTTAATGTCATGTTATTAA ACCCCATAATCATGTTCATGGCATAATTTCTAAGATATTTGTAATATCAATTATCTTGTGTATGTTTTAATGGAAGTGTTAAATAAATGGGTTTGTAGAT ATGAAGAAGTAAATGAATATGAAGAGAAGGCACCATATGCAAAAGTGGCTCATCCCTGGCCAGATCATTTATTTCCATTGCATGTGGCAATGGGAGCAGC TGGTGAAAATGCTAAGACCCAAATTGTCCATGATAGTTGGGATGGTGGTTCTTTTTCCTATGCCTCTTTTGGTTTTACAGCAGCTACTTCAACTTGATGC ATCATTTCATAGCTCTCATATTGTTTTCATTATATAATCAAATAAAATTACATGTACATTATTGTTATGATTTATGAGGGCATGTAAACTACATTTTCGT TTATTATTAATCATTGAAGTTTATGTCACTAAGAAGCTACTGATTCATTGACAAGTGTTTGGTTCTTTTGAGTAGCATTTTCAAGTTGACCTCTTAGTAG TAAAAAGGGAGTTTTTTCTGTTGTCAATAAAGGGATTTTCTTTTTGTAGATTTTACTTTGAGATATTGACTCCTAATATCATATTTGAGGGGAAATGAGA GGAAAAAGAATCCAGAGTATGTAAAGCAAAGAAAAAAGATAGACTACAAATATATTTGTCTTGTGCATACATCAAAATGCAAGGCATAAAATACCCTTCA CCTTTATCAATCTCCGTCAACAATTACAATAAAAAATGTGGACGGACTTTTATCAATCTCCATCGCTCACAAGTGTATTTCATAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_44468; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_2354
| Blastp | Extradiol ring-cleavage dioxygenase from Arabidopsis with 62.82% of identity |
|---|---|
| Blastx | Extradiol ring-cleavage dioxygenase from Arabidopsis with 67.16% of identity |
| Eggnog | extradiol ring-cleavage dioxygenase class IIi protein subunit b(COG3384) |
| Kegg | Link to kegg annotations (AT4G15093) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419399.1) |
| Pfam | Catalytic LigB subunit of aromatic ring-opening dioxygenase (PF02900.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |