Id Trinity | FTRINITY_DN54852_c2_g1_i11 |
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Name Transcript | Ll_transcript_94341 |
Sequence | CAAATTGATTAAAGTTGAAACACAATTTTCTCTCTCTCTAGACACCACATTTTAATTTTCCCCAATCCTCCCTCCTTAGATCCACTCCAACAACAACAAC AACAACGCTCTTTCAGTTCCAAGGATCTGTTCAAAAAACATGGCTACGGTTGATCAACCTCTGTATCCGATAGCGGTTCTGATCGATGAGCTGAAGAATG AGGACATTCAGCTTCGCCTCAACTCGATCCGAAGGCTTTCCACCATTGCGCGTGCGCTCGGCGAAGAAAGAACCAGGAAGGAGCTGATTCCTTTTCTCGG CGAGAGCAACGACGACGAGGATGAAGTTCTTCTTGTAATGGCAGAGGAATTAGGTGTGTTTGTTCCTCATGTTGGTGGTGTTGAGCATGCCAGTGTGTTG CTGCCACCATTGGAAACTCTATGCGCTGTTGAGGAAACTTGTGTTAGGGATAAATCTGTTGAGTCTCTGTGTAAAATTGGTGCTCAGATGAGGGAACAGG ATCTGGTTGAACACTTTATTCCTTTAGTCAAGAGGCTAGCTGCTGGTGAGTGGTTCACAGCACGGGTTTCTGCATGTGGCTTGTTCCATATTGCTTACCC TAGTGCTTCAGAGGTGATAAAAACTGAATTAAGAACAATATATAGTCAGCTGTGTCAAGATGATATGCCAATGGTTAGGAGATCTGCTGCAACAAACCTG GGAAAGTTTGCTGCTACTGTCGAAGCTGTTCACCGGAAAACCGACATCATGTCTTTATTTGAGGAACTCACACAGGATGATCAAGATTCTGTTCGTCTAC TTGCTGTTGAGGGCTGTGCAGCTCTTGGAAAATTGTTGGAGCCCCAAGATTGCGTGGCACATATTCTTCCTGTCATAGTCAATTTCTCTCAGGATAAGTC ATGGCGTGTTCGTTATATGGTTGCAAATCAACTATATGAGCTATGTGAAGCTGTTGGTCCTGACCCTACCAGGTCAGAATTGCTTCCTGCATATGTTCGC CTACTGCGTGATAATGAGGCTGAAGTACGTATTGCTGCTGCTGGGAAAGTGACTAAGTTTTCCCACATATTAAGTCCTGAACTTGCTATTCAGCATATTC TACCCTGTGTGAAGGAGTTATCGGCAGATTCATCTCAACATGTTCGCTCTGCATTGGCCTCAGTTATAATGGGAATGGCACCAGTGCTAGGGAAGGATGC GACAATTGAGCAACTTCTCCCTATTTTCCTTTCTCTTTTGAAAGATGAGTTTCCTGATGTCAGGCTAAACATTATCAGCAAGCTTGACCAAGTGAACCAG GTTATTGGTATTGATCTGTTATCCCAGTCTCTATTACCAGCTATTGTTGAGCTTGCTGAGGATCGGCACTGGAGAGTTCGACTTGCTATCATAGAATACA TACCCTTATTAGCAAGTCAGCTGGGTGTTGGTTTTTTCGATGACAAGCTTGGAGCACTTTGCATGCAATGGCTAAAGGACAAGGTATACTCTATTCGTGA TGCAGCTGCTAATAATGTAAAACGCTTGGCAGAAGAATTTGGACCAGATTGGGCAATGCAGCACATTATCCCTCAGGTCTTTTTCAGCAAATGAACTTTG TCTTTTGATATACAGCAGCAGAATGTTTTACCTTGAACTGTAAAAAAGGATTATGATACTGGGGATATCATAGAATATCATCTAAACCTCTACTTTCAGT GCTTTGAAAATGTTGACTTACACTCATAGGGCCTTGTTTCATTCTTGCAATGTCTTCATTGTCAAGGAAATATAAGAATGAGTATTGTGTGAACAAATGT TACTGTACCTTGGTTGTTTATTTCTTATGTGATATATAGCTGATCCAGTTTAAGAATTATGTTGGCTTTTGAACACTATTAATTAAAGAAACTAATATCC TTGAAGCTGTGATACTGGAAATATTCTGTCACTGAAGAAACTGCTCTGATAATTATCTTTTTACAATTGGCACTTCTTTCTACTATTTTTTGAAATAGAC CCTGAATGCTTATAATCACTATGATATGCAGTATTTACCCAAACAAGTTTCTTATGTTAAACAGGTTCTGGACATGATTAACGATCCACACTATCTGTAT CGGATGACAATTCTACATGCAATTTCTCTTCTAGCTCCTGTTCTGGGCTCGGAGATCACTTCTTCAAAGCTTCTCCCTCTGGTCATTAATGCATCAAAAG ATAGGGTACCCAATATCAAATTCAATGTAGCTAAAGTCTTGCAGTCTCTCATTCCAATTGTTGATGAGTCTGTTGTTGAGAATAGCGTTCGTCCCTGTCT GGTTGAGCTCATTGAGGACCCAGATGTTGATGTTAGGTTTTATGCCTCTCAAGCACTGCAGTCTTGTGACCAAGTCAAGAAGTCCAACTAGATCAATCTG CATATTGTCTTTAGTTATTTTTTCTTAATAGCTTTTCCCCATTTTTTATATGTAATTGACTTATAACCAAATTGCCCATTCCTTTGTATCACATCTTTGT TGAGATCTGTTTTTCTTTCGTTAAATCTGATATCCTTACTACCATCTTCTTCTCTGTAGTGATGAAACGTTGTCCAGAAGTGGGATTGAGTTTTTTCCTT TTGTCATAACAGTAGAATGTTTAACACTCTGTATGAATTTTATGATTTACTAATGCTAAGAATATATTGAGAATTTGCT BLAST |
Tissue | flowers |
Gene name | LI_gene_46289; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_94341
Blastp | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform from Arabidopsis with 88.77% of identity |
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Blastx | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform from Arabidopsis with 88.77% of identity |
Eggnog | (Regulatory) subunit(ENOG410XQVI) |
Kegg | Link to kegg annotations (AT3G25800) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019457862.1) |
Pfam | Vacuolar 14 Fab1-binding region (PF12755.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |