Id Trinity | FTRINITY_DN54892_c2_g2_i3 |
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Name Transcript | Ll_transcript_93962 |
Sequence | TTACAAACACAAATTTGGATAAGCATGGCGAATAGTATGGGGCTACATCACCATTCACGTTGACCACTCTAGTTCATTACACACATTCTGTAACCTCATC ATAACCATACACTATCTCAAGTCTAAAAGTCAAAATTAAAGTACAATAATCCAACGGTGTTAGTTGATGCTAATGCTATATACCATGATCCTATTTTTGA GTTATATTTACGGGAATGTGTTAAAGATATTAAAGTTTTCAGCTTTGTAGTTACACAGAGAGAGAAAGAGAGAGAAAAAGAGTTATGGCTATGGCAACAA TGAGAAAGATTATTCCAAAGAGCCCAGAAGCGAAGCTTGGTATGAGAGTGAGTGATTTGTGGGATGTTCAGGAACCACAGCTAAGTCCTACTGAAAAGCT TAATGCTTGTTTTGAAAGCATACCTGTTTCTGCGTTTCCTTTAGCTCCTTCAAACCAAGAAATTGAGATAAAATCAGACGCCACACTAGCTGAGGCTGTT AAAATACTGGCACATCACAACGTTCTCAGCGCACCTGTGGTGAATGTTGATGCACCTGAAGATGCTAGTTGGATTGACCGATATATCGGGATAGTCGAGT TTGCTGGAATTGTTGTATGGATTCTGCATCAGTCTGAACCTTCAACTCCTAAGAGTCCATCAACTCCAACAAGTGCAAGTGCTATTGCAGCTGCAGCTAA TGGAATAGCCTTTGCTCTAGAGTTAGAAGCCTTAGGTCTTGGATCTGCTGCAACAACTTCAGGGGACTTCTTCGAGGATCTCACTTCTTCTGAGCTTTAT AAGAATACCAAGGTTCGCGATATTTCAGGGACGTTCCGCTGGGCGCCATTCCTTGCTTTAGAGAGATCAAACTCATTTCTAACCATGCTCTTGCTGCTTT CTAAGTACAAGATGAAGGGTGTTCCGGTGGTAGATTTAGGTGCCGGTAGAATTGATAACATCATTACACAGTCTGCTGTAATTCATATGTTGGCTGAATG TGCTGGCCTTCAGTGGTTTGAAAGTTGGGGAACCAAGGAACTATCTGAACTTGGTCTTCCCCTGGTGCCACCAAATCATATCATCAAGGTGTGTAACTAT TAAGTCACAGTTCTGCATCAACTGATGGGAAATGATATACATTAGCAGCAAACCTTAACTAACAGTAAAGTCAAATCCTACCACAGTACACTTGGTATAA TATGAAATAGTTGTATTACCATAATGCTATATACTATAACCAGTTAGAATAATGCTACTTACACACAATACCTCTCATCCGCGTAGTTTTCGCCATCTGG TTGCATATAACCCCGCCTTGTTTTCTTATCATTTATTAATTTATATTCCGATCCTAGCATGTAAGAGGATGTGAGACATGATCACACAGGTCACGCAACA AGCTTAATCCAATCTATTATTCCTCCAATCCCTGCACACACACCCTTTTCTGAATGTCCTGTATAGGCATAATTTTATGCATATAATCTATTCTGCTATA TAGTGGGGTATAATTTGAGCTCTGCAATGCATTAAACTGTGACAAATATGAATTCCCATTAACTATAATGTGTATGGAAAAAAAGCTTTCCTAGATGTCT TAAAATTTGTGTACCTCAGAATATATATGGCTAACGCTGTAAACTAAGATAAGTGGTTTCATTTTCCTCTTTCAATTAAGCTTGTTGAACTTGATGAGCT TTTTTACAATGGATTGTTTCCTTGTTTCCAGGTTTGTGAGGATGAACCAGTTCTTCAAGCATTTAAACTGATGAGGAAAAAGAAAGTTGGAGGGGTGCCT GTAATCGAGAGAGGCGGCAGCAAGCCAGTTGGTAATATAAGCTTGCGAGATGTTCAGTTCTTGCTAACTGCTCCAGAAATCTACCATGATTATAGGTGTG TAATTATATCTACTTGTGTAGACTGTATTTTCTTTCTTTTGTTCTATCTGACACATTATCATTGAATGTTAACACTATAACAGAACTATTACAGTGAAGG ACTTTCTCTCAGCAGTTAGAAGCTACTTAGAGAAGAATCAGAAGGCCTTCCCAAAGTTAACTGAATATATAACATGCAAAAAAGACTGCACTGTCAAAGA ATTGATTCAATTATTTGACCATGAGAAGATTAACAGGGTTTATGTTGTGGATGATGATGGGAATCTGCAAGGACTGATCACACTAAGAGATGTCATCTCA AGGCTAGTACATGAGCCGCGAGGCTATTTTGGCGATTTCTTCGATGGCGTTCTCCCGCTGCCTGCAAACTGCAGGGTTTAACAGGCAAGACATCAAGGAA GAATAACTTATGATGTTGCAACAGTTTTTTTAGTAGAAATGATAAAAATAATGCAAATTGCTTTTTATGTGTTTTCTTCAGGGTTGAAGATGTTAGGCTT AGGTCTTTGTAACTTAGGCAGTTTGCAAGTTACTTGCACCAGTTTACCAGGTGTTACTTTGTGACTGGGTACTGTAATTATGGTATAACTATAAGTTTTG TCAAGTTTTGAAAAAGATTGATTCCCTTAAAAAATGTTATTTTTACACCAATACTTACACATTATTATTATCTAATGGACTAAGCTTAATGAAACTGCAG CTAGGAAATTGGAACATATGTAACTTATGTTCTAATCCAACCATTTGGGACTAGTGAACTTGGTGTGGAAAGTTGAC BLAST |
Tissue | flowers |
Gene name | LI_gene_46722; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_93962
Blastp | SNF1-related protein kinase regulatory subunit gamma-1 from Arabidopsis with 71.6% of identity |
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Blastx | SNF1-related protein kinase regulatory subunit gamma-1 from Arabidopsis with 71.21% of identity |
Eggnog | snf1-related protein kinase regulatory subunit(ENOG4111F2I) |
Kegg | Link to kegg annotations (AT3G48530) |
CantataDB | Link to cantataDB annotations (CNT0002110) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463506.1) |
Pfam | CBS domain (PF00571.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |