Id Trinity | FTRINITY_DN54892_c2_g2_i7 |
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Name Transcript | Ll_transcript_93968 |
Sequence | TTGATTCGACCTAAATGGAAATTGATATAGTATCTGATCAACCAAAGACAAAAGTTTTTAGGCTGAGACATATACGTTATGGTATGTAGTACTTTTATGT TTTCTCAAGAAGCATAGAGTAGCCATGGACAGTGGTCCGTGAGAAAGACAGTTAAGTGCGTGAGATTCTCATCTAATAGGGGTTTGGGGAGGTAGATGTA TATTACCTTACTTTTGTCTGCTAAGAAGTTGTTTCCACGATTTGAACCTATGACCCTAGGTTATATTGCAAGCAACCTCGGTATTGCATCGAGGCTTACC CTCACATTGATTCGGGATACATATAGGAAAAAATATTTGAAAGATGCATTGAGGAAAAAATATTTGAAAGAAGTATTGAAGGATACATGCTTCATAGTGT TTTCTTATTCTGTTTTGGTCTCAACATGTATATTTATGTTGTGTTTAGAAATTGAGATAAAATCAGACGCCACACTAGCTGAGGCTGTTAAAATACTGGC ACATCACAACGTTCTCAGCGCACCTGTGGTGAATGTTGATGCACCTGAAGATGCTAGTTGGATTGACCGATATATCGGGATAGTCGAGTTTGCTGGAATT GTTGTATGGATTCTGCATCAGTCTGAACCTTCAACTCCTAAGAGTCCATCAACTCCAACAAGTGCAAGTGCTATTGCAGCTGCAGCTAATGGAATAGCCT TTGCTCTAGAGTTAGAAGCCTTAGGTCTTGGATCTGCTGCAACAACTTCAGGGGACTTCTTCGAGGATCTCACTTCTTCTGAGCTTTATAAGAATACCAA GGTTCGCGATATTTCAGGGACGTTCCGCTGGGCGCCATTCCTTGCTTTAGAGAGATCAAACTCATTTCTAACCATGCTCTTGCTGCTTTCTAAGTACAAG ATGAAGGGTGTTCCGGTGGTAGATTTAGGTGCCGGTAGAATTGATAACATCATTACACAGTCTGCTGTAATTCATATGTTGGCTGAATGTGCTGGCCTTC AGTGGTTTGAAAGTTGGGGAACCAAGGAACTATCTGAACTTGGTCTTCCCCTGGTGCCACCAAATCATATCATCAAGGTGTGTAACTATTAAGTCACAGT TCTGCATCAACTGATGGGAAATGATATACATTAGCAGCAAACCTTAACTAACAGTAAAGTCAAATCCTACCACAGTACACTTGGTATAATATGAAATAGT TGTATTACCATAATGCTATATACTATAACCAGTTAGAATAATGCTACTTACACACAATACCTCTCATCCGCGTAGTTTTCGCCATCTGGTTGCATATAAC CCCGCCTTGTTTTCTTATCATTTATTAATTTATATTCCGATCCTAGCATGTAAGAGGATGTGAGACATGATCACACAGGTCACGCAACAAGCTTAATCCA ATCTATTATTCCTCCAATCCCTGCACACACACCCTTTTCTGAATGTCCTGTATAGGCATAATTTTATGCATATAATCTATTCTGCTATATAGTGGGGTAT AATTTGAGCTCTGCAATGCATTAAACTGTGACAAATATGAATTCCCATTAACTATAATGTGTATGGAAAAAAAGCTTTCCTAGATGTCTTAAAATTTGTG TACCTCAGAATATATATGGCTAACGCTGTAAACTAAGATAAGTGGTTTCATTTTCCTCTTTCAATTAAGCTTGTTGAACTTGATGAGCTTTTTTACAATG GATTGTTTCCTTGTTTCCAGGTTTGTGAGGATGAACCAGTTCTTCAAGCATTTAAACTGATGAGGAAAAAGAAAGTTGGAGGGGTGCCTGTAATCGAGAG AGGCGGCAGCAAGCCAGTTGGTAATATAAGCTTGCGAGATGTTCAGTTCTTGCTAACTGCTCCAGAAATCTACCATGATTATAGGTGTGTAATTATATCT ACTTGTGTAGACTGTATTTTCTTTCTTTTGTTCTATCTGACACATTATCATTGAATGTTAACACTATAACAGAACTATTACAGTGAAGGACTTTCTCTCA GCAGTTAGAAGCTACTTAGAGAAGAATCAGAAGGCCTTCCCAAAGTTAACTGAATATATAACATGCAAAAAAGACTGCACTGTCAAAGAATTGATTCAAT TATTTGACCATGAGAAGATTAACAGGGTTTATGTTGTGGATGATGATGGGAATCTGCAAGGACTGATCACACTAAGAGATGTCATCTCAAGGCTAGTACA TGAGCCGCGAGGCTATTTTGGCGATTTCTTCGATGGCGTTCTCCCGCTGCCTGCAAACTGCAGGGTTTAACAGGCAAGACATCAAGGAAGAATAACTTAT GATGTTGCAACAGTTTTTTTAGTAGAAATGATAAAAATAATGCAAATTGCTTTTTATGTGTTTTCTTCAGGGTTGAAGATGTTAGGCTTAGGTCTTTGTA ACTTAGGCAGTTTGCAAGTTACTTGCACCAGTTTACCAGGTGTTACTTTGTGACTGGGTACTGTAATTATGGTATAACTATAAGTTTTGTCAAGTTTTGA AAAAGATTGATTCCCTTAAAAAATGTTATTTTTACACCAATACTTACACATTATTATTATCTAATGGACTAAGCTTAATGAAACTGCAGCTAGGAAATTG GAACATATGTAACTTATGTTCTAATCCAACCATTTGGGACTAGTGAACTTGGTGTGGAAAGTTGAC BLAST |
Tissue | flowers |
Gene name | LI_gene_46722; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_93968
Blastp | SNF1-related protein kinase regulatory subunit gamma-1 from Arabidopsis with 69.19% of identity |
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Blastx | SNF1-related protein kinase regulatory subunit gamma-1 from Arabidopsis with 68.72% of identity |
Eggnog | snf1-related protein kinase regulatory subunit(ENOG4111F2I) |
Kegg | Link to kegg annotations (AT3G48530) |
CantataDB | Link to cantataDB annotations (CNT0002110) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463506.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |